RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	SMIM2	Q9BVW6	85 aa		5.07	□□□□□ -1.6
PAX6-267	ENST00000640251	HLA-DRB4	X5D2U9	266 aa		5.07	□□□□□ -1.6
PAX6-267	ENST00000640251	COL7A1	Q02388	2944 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	TRAV12-1	A0A0B4J245	112 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	KLLN	B2CW77	178 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251		H7C1H1	209 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	CMC4	P56277	68 aa	Predicted RBP	5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	EGFEM1P	Q0D2K5	195 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	HSD52	Q0P140	79 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	UBE2V1	Q13404	147 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	VAMP3	Q15836	100 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	MPV17L2	Q567V2	206 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	FOXI2	Q6ZQN5	318 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	STPG4	Q8N801	248 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	KIR2DL4	Q99706	377 aa		5.06	□□□□□ -1.6
PAX6-267	ENST00000640251	IGKV3-7	A0A075B6H7	116 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251		A0A087WW49	117 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251		A0A087WX48	190 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251		A0A096LNJ9	63 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251		A0A0J9YX75	114 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251		J3KRW8	73 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	CCL24	O00175	119 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	NXPH4	O95158	308 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	MGP	P08493	103 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	CD7	P09564	240 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	CDKN1B	P46527	198 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	NMU	P48645	174 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	KRTAP10-7	P60409	375 aa	Predicted RBP	5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	BVES-AS1	Q5T3Y7	98 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	GTF2H5	Q6ZYL4	71 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	C14orf178	Q8N769	122 aa	Predicted RBP	5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	POM121L12	Q8N7R1	296 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	DCANP1	Q8TF63	244 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	TOMM6	Q96B49	74 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	TMEM141	Q96I45	108 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	C18orf15	Q96N68	181 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	HIGD1B	Q9P298	99 aa		5.05	□□□□□ -1.6
PAX6-267	ENST00000640251	IGLV2-18	A0A075B6J9	118 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	IGHV1OR15-1	A0A075B7D0	117 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	LINC01619	G3V211	115 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251		K7EQG2	157 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	PRB4	P10163	310 aa	Predicted RBP	5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	SYNJ2BP	P57105	145 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	LINC01547	P58512	204 aa	Predicted RBP	5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	HERVK_113	P61574	105 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	TAL2	Q16559	108 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	ERAS	Q7Z444	233 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	NFE4	Q86UQ8	179 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	OR4C5	Q8NGB2	326 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	CYSLTR1	Q9Y271	337 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	SELENOK	Q9Y6D0	94 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	RYR2	Q92736	4967 aa		5.04	□□□□□ -1.6
PAX6-267	ENST00000640251	TRAV12-3	A0A0B4J271	114 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251		F8VRH5	84 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251		H3BRM9	83 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	GNRH2	O43555	120 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	ZNF688	P0C7X2	276 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	TFPI2	P48307	235 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	PRR9	Q5T870	116 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	TRPT1	Q86TN4	253 aa	Known RBP	5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	OR11H1	Q8NG94	326 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	DYNLRB2	Q8TF09	96 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	C4orf3	Q8WVX3	66 aa		5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	MCRIP2	Q9BUT9	160 aa	Known RBP	5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.03	□□□□□ -1.6
PAX6-267	ENST00000640251	TRAV26-2	A0A0B4J265	109 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	TRAV25	A0A0B4J276	109 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	TRBV6-5	A0A0K0K1A5	114 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251		F6UB75	175 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	SMIM13	P0DJ93	91 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	RNASE3	P12724	160 aa	Known RBP	5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	GATA1	P15976	413 aa	Predicted RBP	5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	ZC2HC1B	Q5TFG8	222 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	C2orf66	Q6UXQ4	117 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	RASL10A	Q92737	203 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	DLX4	Q92988	240 aa	Predicted RBP	5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	PTH2	Q96A98	100 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	B9D2	Q9BPU9	175 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	CBY1	Q9Y3M2	126 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	NBEAL2	Q6ZNJ1	2754 aa		5.02	□□□□□ -1.61
PAX6-267	ENST00000640251	IGHV3-16	A0A0C4DH30	117 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	OR11H12	B2RN74	326 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	FXYD7	P58549	80 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	RHOH	Q15669	191 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	SBSPON	Q8IVN8	264 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	OR11H2	Q8NH07	326 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	C9orf85	Q96MD7	179 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	TIMM17A	Q99595	171 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	SPX	Q9BT56	116 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	HHLA3	Q9XRX5	114 aa		5.01	□□□□□ -1.61
PAX6-267	ENST00000640251	HYDIN	Q4G0P3	5121 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	TRBV27	A0A0K0K1C4	114 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251		A8MWV9	139 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	TAX1BP3	O14907	124 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	FGF6	P10767	208 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	SMAGP	Q0VAQ4	97 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	PMVK	Q15126	192 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	ZNF56	Q15929	161 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	ZNF876P	Q49A33	203 aa		5	□□□□□ -1.61
PAX6-267	ENST00000640251	C2orf91	Q6ZV80	131 aa		5	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms