RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	INAFM1	C9JVW0	142 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	PRB1	P04280	392 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	HAMP	P81172	84 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	MIA	Q16674	131 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	SND1-IT1	Q9HBX3	110 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	PTPRQ	Q9UMZ3	2332 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	IGLV4-69	A0A075B6H9	119 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	IGKV1D-37	A0A075B6S9	117 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	KIAA0087	Q14695	138 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	IGHV1OR15-1	A0A075B7D0	117 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	RNF223	E7ERA6	249 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	MRPL33	O75394	65 aa	Known RBP	4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	C10orf55	Q5SWW7	151 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	MRPL36	Q9P0J6	103 aa	Known RBP	4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	CEP192	Q8TEP8	1941 aa		4.44	□□□□□ -1.7
NECAP1-222	ENST00000640072	SAA2	P0DJI9	122 aa	Predicted RBP	4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	PRB3	Q04118	309 aa	Predicted RBP	4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	RPL39L	Q96EH5	51 aa	Known RBP	4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	WNK2	Q9Y3S1	2297 aa		4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	DSCAM	O60469	2012 aa		4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	NOTCH4	Q99466	2003 aa		4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	COL4A6	Q14031	1691 aa		4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	SDK1	Q7Z5N4	2213 aa		4.43	□□□□□ -1.7
NECAP1-222	ENST00000640072	C16orf90	A8MZG2	172 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	CDK2AP2	O75956	126 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	LMO4	P61968	165 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	IGLV3-32	A0A0A0MS00	114 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	BCE1	O60756	84 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	NDUFA4L2	Q9NRX3	87 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	NAV3	Q8IVL0	2385 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	TRAV22	A0A0B4J277	110 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	RNASE1	P07998	156 aa	Known RBP	4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	IGHV3-30-3	P0DP02	117 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	RPL39	P62891	51 aa	Known RBP	4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072		Q0VFX4	171 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	FBXL19-AS1	Q494R0	122 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	GGN	Q86UU5	652 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	DEFB126	Q9BYW3	111 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072	LTBP2	Q14767	1821 aa		4.42	□□□□□ -1.7
NECAP1-222	ENST00000640072		A0A0J9YX75	114 aa		4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072	WT1-AS	Q06250	92 aa		4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072	FDCSP	Q8NFU4	85 aa		4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072	CNFN	Q9BYD5	112 aa		4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072	ZNF503-AS2	A6NEH8	195 aa		4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072	NCR3	O14931	201 aa		4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072	AMELX	Q99217	191 aa		4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072	RPL27A	P46776	148 aa	Known RBP	4.41	□□□□□ -1.7
NECAP1-222	ENST00000640072		A8MU10	97 aa		4.4	□□□□□ -1.7
NECAP1-222	ENST00000640072	RNASE13	Q5GAN3	156 aa	Known RBP	4.4	□□□□□ -1.7
NECAP1-222	ENST00000640072	VMO1	Q7Z5L0	202 aa		4.4	□□□□□ -1.7
NECAP1-222	ENST00000640072		A6NED7	52 aa		4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	PDE6H	Q13956	83 aa		4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	CEP250	Q9BV73	2442 aa		4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	CRP	P02741	224 aa		4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	IGFL4	Q6B9Z1	124 aa		4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	TMEM254	Q8TBM7	123 aa		4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	PRAC1	Q96KF2	57 aa		4.4	□□□□□ -1.71
NECAP1-222	ENST00000640072	IGKV3D-11	A0A0A0MRZ8	115 aa		4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	TRBV10-3	A0A0K0K1G6	114 aa		4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	IGIP	A6NJ69	53 aa		4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	C3orf84	H3BNL1	204 aa		4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072		Q6ZRP5	223 aa		4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	C18orf65	Q6ZTR6	163 aa		4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	C17orf82	Q86X59	251 aa	Predicted RBP	4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	F5	P12259	2224 aa		4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	TPR	P12270	2363 aa	Known RBP	4.39	□□□□□ -1.71
NECAP1-222	ENST00000640072	IGLV9-49	A0A0B4J1Y8	123 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	LHB	P01229	141 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	ICE1	Q9Y2F5	2266 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	GNRH2	O43555	120 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	ABCA4	P78363	2273 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	PINLYP	A6NC86	204 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	C19orf84	I3L1E1	186 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	LECT2	O14960	151 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	PRB2	P02812	416 aa	Predicted RBP	4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	C9orf116	Q5BN46	136 aa	Predicted RBP	4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	ZNF580	Q9UK33	172 aa		4.38	□□□□□ -1.71
NECAP1-222	ENST00000640072	IGLV3-12	A0A075B6K2	115 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	TRAV10	A0A0B4J240	114 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072		H3BRN7	92 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	MALRD1	Q5VYJ5	2156 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	TSHB	P01222	138 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	CCL4	P13236	92 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	NREP	Q16612	68 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	TMEM167A	Q8TBQ9	72 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	ORMDL1	Q9P0S3	153 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	IGKV3D-20	A0A0C4DH25	116 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072	MIR7-3HG	Q8N6C7	128 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072		Q9Y3F1	56 aa		4.37	□□□□□ -1.71
NECAP1-222	ENST00000640072		H0YGX0	51 aa		4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072	LY6H	O94772	140 aa		4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072	RPL36A	P83881	106 aa	Known RBP	4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072	CCL14	Q16627	93 aa		4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072	RPL36AL	Q969Q0	106 aa	Known RBP	4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072		B4DSR2	109 aa		4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072	LINC00308	Q8TCZ7	52 aa		4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072	ZNF702P	Q9H963	129 aa		4.36	□□□□□ -1.71
NECAP1-222	ENST00000640072	IGLV3-9	A0A075B6K5	115 aa		4.36	□□□□□ -1.71

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