RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 BGLAPP02818 100 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 HCG22E2RYF7 251 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 RPL27AP46776 148 aaKnown RBP3.2□□□□□ -1.9
SCN3A-209ENST00000639244 EIF4EBP1Q13541 118 aaPredicted RBP3.2□□□□□ -1.9
SCN3A-209ENST00000639244 FAM74A4Q5TZK3 123 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 ZFAND3Q9H8U3 227 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 PROP1O75360 226 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 CRIP2P52943 208 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-209ENST00000639244 C2orf83Q53S99 150 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 LINC01590Q5TEZ4 76 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 DOPEY1Q5JWR5 2465 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 LYPD5Q6UWN5 251 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 SMCR5Q8TEV8 140 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV1-16P04430 117 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 GOLGB1Q14789 3259 aaKnown RBP3.19□□□□□ -1.9
SCN3A-209ENST00000639244 A0A1B0GW54 56 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 M0R1W7 72 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 BAALC-AS2P0C853 105 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 TMEM254Q8TBM7 123 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 IGLV3-32A0A0A0MS00 114 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV3D-20A0A0C4DH25 116 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 CISD3P0C7P0 127 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 USP9XQ93008 2570 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-209ENST00000639244 TRAV21A0A0B4J279 112 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 KLLNB2CW77 178 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 HOXA4Q00056 320 aaPredicted RBP3.18□□□□□ -1.9
SCN3A-209ENST00000639244 C10orf128Q5T292 105 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 C11orf86A6NJI1 115 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TFF1P04155 84 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TMEM263Q8WUH6 116 aaKnown RBP3.18□□□□□ -1.9
SCN3A-209ENST00000639244 NDUFB1O75438 58 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 ZNF491Q8N8L2 437 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 U3KQK5 164 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 IGLV3-16A0A075B6K0 115 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV1-8A0A0C4DH67 115 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 A0A087WVE0 104 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 A0A0J9YY99 117 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 ITGBL1O95965 494 aaPredicted RBP3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TRGV3P03979 118 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 PRSS33Q8NF86 280 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 ACANP16112 2415 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TRAV22A0A0B4J277 110 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 LY6EQ16553 131 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 A0A0G2JRQ6 117 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 Q8IYB0 196 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 FAM167A-AS1Q96KT0 104 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 BPESC1Q9GZL8 116 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 FAM168AQ92567 244 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV5-10-1A0A0J9YXX1 117 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 NOTCH2NLQ7Z3S9 236 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 EGR2P11161 476 aaPredicted RBP3.17□□□□□ -1.9
SCN3A-209ENST00000639244 MTORP42345 2549 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 LTBP1Q14766 1721 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 HECTD1Q9ULT8 2610 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 REG3AQ06141 175 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 RPL39P5Q59GN2 51 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 RNF185Q96GF1 192 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 COX14Q96I36 57 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 A0A096LNJ9 63 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 SAA2P0DJI9 122 aaPredicted RBP3.16□□□□□ -1.9
SCN3A-209ENST00000639244 ENHOQ6UWT2 76 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-64A0A075B6Q5 118 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 PRR3P79522 188 aaKnown RBP3.16□□□□□ -1.9
SCN3A-209ENST00000639244 PDE6HQ13956 83 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 TMEM14BQ9NUH8 114 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 ARMS2P0C7Q2 107 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 USP9YO00507 2555 aaPredicted RBP3.16□□□□□ -1.9
SCN3A-209ENST00000639244 E7EUB6 86 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 ODF3L1Q8IXM7 274 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 TTTY12Q9BZ98 90 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 ASB16-AS1Q495Z4 193 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 PSMG3-AS1Q96PY0 264 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 IGLV2-8P01709 118 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 CD24P25063 80 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C15orf32Q32M92 178 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 ZNRF1Q8ND25 227 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 PIP4P2Q8N4L2 257 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C14orf132Q9NPU4 83 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 CDC42SE1Q9NRR8 79 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C19orf84I3L1E1 186 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C9orf116Q5BN46 136 aaPredicted RBP3.15□□□□□ -1.91
SCN3A-209ENST00000639244 IGLV9-49A0A0B4J1Y8 123 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 LINC01546A6NGU7 62 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 LINC00337Q8N6G1 96 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 JMJD7-PLA2G4BH0Y9G9 81 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 ITPR1Q14643 2758 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 C1orf147Q96MC9 270 aaPredicted RBP3.14□□□□□ -1.91
SCN3A-209ENST00000639244 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 CRPP02741 224 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 PLA2G1BP04054 148 aaKnown RBP3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IGKV1-12A0A0C4DH73 117 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IGKV1D-12P01611 117 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 TMEM61Q8N0U2 210 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IGFL3Q6UXB1 125 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IMMP1LQ96LU5 166 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 C11orf71Q6IPW1 123 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 A6NN06 94 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms