RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 BGLAPP02818 100 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 HCG22E2RYF7 251 aa3.2□□□□□ -1.9
SCN3A-209ENST00000639244 RPL27AP46776 148 aaKnown RBP3.2□□□□□ -1.9
SCN3A-209ENST00000639244 EIF4EBP1Q13541 118 aaPredicted RBP3.2□□□□□ -1.9
SCN3A-209ENST00000639244 FAM74A4Q5TZK3 123 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 ZFAND3Q9H8U3 227 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 PROP1O75360 226 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 CRIP2P52943 208 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-209ENST00000639244 C2orf83Q53S99 150 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 LINC01590Q5TEZ4 76 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 DOPEY1Q5JWR5 2465 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 LYPD5Q6UWN5 251 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 SMCR5Q8TEV8 140 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV1-16P04430 117 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 GOLGB1Q14789 3259 aaKnown RBP3.19□□□□□ -1.9
SCN3A-209ENST00000639244 A0A1B0GW54 56 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 M0R1W7 72 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 BAALC-AS2P0C853 105 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 TMEM254Q8TBM7 123 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 IGLV3-32A0A0A0MS00 114 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV3D-20A0A0C4DH25 116 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 CISD3P0C7P0 127 aa3.19□□□□□ -1.9
SCN3A-209ENST00000639244 USP9XQ93008 2570 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-209ENST00000639244 TRAV21A0A0B4J279 112 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 KLLNB2CW77 178 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 HOXA4Q00056 320 aaPredicted RBP3.18□□□□□ -1.9
SCN3A-209ENST00000639244 C10orf128Q5T292 105 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 C11orf86A6NJI1 115 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TFF1P04155 84 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TMEM263Q8WUH6 116 aaKnown RBP3.18□□□□□ -1.9
SCN3A-209ENST00000639244 NDUFB1O75438 58 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 ZNF491Q8N8L2 437 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 U3KQK5 164 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 IGLV3-16A0A075B6K0 115 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 IGKV1-8A0A0C4DH67 115 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 A0A087WVE0 104 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 A0A0J9YY99 117 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 ITGBL1O95965 494 aaPredicted RBP3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TRGV3P03979 118 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 PRSS33Q8NF86 280 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 ACANP16112 2415 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 TRAV22A0A0B4J277 110 aa3.18□□□□□ -1.9
SCN3A-209ENST00000639244 LY6EQ16553 131 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 A0A0G2JRQ6 117 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 Q8IYB0 196 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 FAM167A-AS1Q96KT0 104 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 BPESC1Q9GZL8 116 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 FAM168AQ92567 244 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV5-10-1A0A0J9YXX1 117 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 NOTCH2NLQ7Z3S9 236 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 EGR2P11161 476 aaPredicted RBP3.17□□□□□ -1.9
SCN3A-209ENST00000639244 MTORP42345 2549 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 LTBP1Q14766 1721 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 HECTD1Q9ULT8 2610 aa3.17□□□□□ -1.9
SCN3A-209ENST00000639244 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 REG3AQ06141 175 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 RPL39P5Q59GN2 51 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 RNF185Q96GF1 192 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 COX14Q96I36 57 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 A0A096LNJ9 63 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 SAA2P0DJI9 122 aaPredicted RBP3.16□□□□□ -1.9
SCN3A-209ENST00000639244 ENHOQ6UWT2 76 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 IGHV3-64A0A075B6Q5 118 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 PRR3P79522 188 aaKnown RBP3.16□□□□□ -1.9
SCN3A-209ENST00000639244 PDE6HQ13956 83 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 TMEM14BQ9NUH8 114 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 ARMS2P0C7Q2 107 aa3.16□□□□□ -1.9
SCN3A-209ENST00000639244 USP9YO00507 2555 aaPredicted RBP3.16□□□□□ -1.9
SCN3A-209ENST00000639244 E7EUB6 86 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 ODF3L1Q8IXM7 274 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 TTTY12Q9BZ98 90 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 ASB16-AS1Q495Z4 193 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 PSMG3-AS1Q96PY0 264 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 IGLV2-8P01709 118 aa3.15□□□□□ -1.9
SCN3A-209ENST00000639244 CD24P25063 80 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C15orf32Q32M92 178 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 ZNRF1Q8ND25 227 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 PIP4P2Q8N4L2 257 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C14orf132Q9NPU4 83 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 CDC42SE1Q9NRR8 79 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C19orf84I3L1E1 186 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 C9orf116Q5BN46 136 aaPredicted RBP3.15□□□□□ -1.91
SCN3A-209ENST00000639244 IGLV9-49A0A0B4J1Y8 123 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 LINC01546A6NGU7 62 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 LINC00337Q8N6G1 96 aa3.15□□□□□ -1.91
SCN3A-209ENST00000639244 JMJD7-PLA2G4BH0Y9G9 81 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 ITPR1Q14643 2758 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 C1orf147Q96MC9 270 aaPredicted RBP3.14□□□□□ -1.91
SCN3A-209ENST00000639244 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 CRPP02741 224 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 PLA2G1BP04054 148 aaKnown RBP3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IGKV1-12A0A0C4DH73 117 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IGKV1D-12P01611 117 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 TMEM61Q8N0U2 210 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IGFL3Q6UXB1 125 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 IMMP1LQ96LU5 166 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 C11orf71Q6IPW1 123 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 A6NN06 94 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms