RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 UBE2G1P62253 170 aa3.5□□□□□ -1.85
PDE4D-229ENST00000638939 RPL24P83731 157 aaKnown RBP3.5□□□□□ -1.85
PDE4D-229ENST00000638939 SDIM1Q6ZPB5 146 aa3.5□□□□□ -1.85
PDE4D-229ENST00000638939 OR10AG1Q8NH19 301 aa3.5□□□□□ -1.85
PDE4D-229ENST00000638939 SPACA4Q8TDM5 124 aa3.5□□□□□ -1.85
PDE4D-229ENST00000638939 CHCHD5Q9BSY4 110 aa3.5□□□□□ -1.85
PDE4D-229ENST00000638939 TRBV25-1A0A075B6N4 114 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 IGHV3-64A0A075B6Q5 118 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 BORCS7-ASMTA0A0B4J1R7 106 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 MAP1LC3B2A6NCE7 125 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 SNAI2O43623 268 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 OR5AL1P0C617 328 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 RBX1P62877 108 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 IQCJQ1A5X6 159 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 CLPSL2Q6UWE3 100 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 NTM-AS1Q6ZSK4 140 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 LINC00269Q8N2A0 174 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 AP1S3Q96PC3 154 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 ZNF471Q9BX82 626 aaPredicted RBP3.49□□□□□ -1.85
PDE4D-229ENST00000638939 MAP1LC3BQ9GZQ8 125 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 ALG5Q9Y673 324 aa3.49□□□□□ -1.85
PDE4D-229ENST00000638939 TMSB15BA0A087X1C1 80 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.48□□□□□ -1.85
PDE4D-229ENST00000638939 TRAV8-4A0A0B4J246 113 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 IGHV1-24A0A0C4DH33 117 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 PCP4L1A6NKN8 68 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 P01737 135 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 S100A9P06702 114 aaKnown RBP3.48□□□□□ -1.85
PDE4D-229ENST00000638939 GIPP09681 153 aaPredicted RBP3.48□□□□□ -1.85
PDE4D-229ENST00000638939 GZMBP10144 247 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 AKR1C3P42330 323 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 REG3AQ06141 175 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 AKR1C8PQ5T2L2 129 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 RPL7L1Q6DKI1 246 aaKnown RBP3.48□□□□□ -1.85
PDE4D-229ENST00000638939 INO80EQ8NBZ0 244 aaPredicted RBP3.48□□□□□ -1.85
PDE4D-229ENST00000638939 STOML3Q8TAV4 291 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 DERL1Q9BUN8 251 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 PLAC8Q9NZF1 115 aa3.48□□□□□ -1.85
PDE4D-229ENST00000638939 A0A087WYN8 130 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 A0A1B0GUV1 79 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 SPANXN1Q5VSR9 72 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 NRACQ8N912 160 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 C7orf33Q8WU49 177 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 MED28Q9H204 178 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 KIF25-AS1Q9Y6Z4 181 aa3.47□□□□□ -1.85
PDE4D-229ENST00000638939 IGLV10-54A0A075B6I4 117 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 FXYD6-FXYD2A0A087WZ82 144 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 H7C1H1 209 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 M0QY20 66 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 PHOX2AO14813 284 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 SLPIP03973 132 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 SMIM17P0DL12 118 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 HERV-K104P63124 156 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 PRR3P79522 188 aaKnown RBP3.46□□□□□ -1.86
PDE4D-229ENST00000638939 Q5BKY6 102 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 C15orf56Q8N910 161 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 C20orf203Q8NBC4 194 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 LINC01600Q96MT4 127 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 TMEM243Q9BU79 118 aa3.46□□□□□ -1.86
PDE4D-229ENST00000638939 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
PDE4D-229ENST00000638939 GVQW2A0A096LPI5 108 aaPredicted RBP3.45□□□□□ -1.86
PDE4D-229ENST00000638939 G3V3Q6 166 aa3.45□□□□□ -1.86
PDE4D-229ENST00000638939 PFDN1O60925 122 aa3.45□□□□□ -1.86
PDE4D-229ENST00000638939 IGLC6P0CF74 106 aa3.45□□□□□ -1.86
PDE4D-229ENST00000638939 GFRA4Q9GZZ7 299 aa3.45□□□□□ -1.86
PDE4D-229ENST00000638939 IGLV9-49A0A0B4J1Y8 123 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 MUC21A0A0G2JKD1 596 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 A0A0J9YXV3 536 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 MUC21A0A140T8X8 626 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 UMAD1C9J7I0 102 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 H0Y8G0 127 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 NDUFS6O75380 124 aaKnown RBP3.44□□□□□ -1.86
PDE4D-229ENST00000638939 MGPP08493 103 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 CACNG7P62955 275 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 SRSF9Q13242 221 aaKnown RBP eCLIP3.44□□□□□ -1.86
PDE4D-229ENST00000638939 ZNF345Q14585 488 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 RASL11AQ6T310 242 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 BAGE2Q86Y30 109 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 FER1L6-AS1Q8NA97 138 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 C11orf52Q96A22 123 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 SMIM12Q96EX1 92 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 DPH3P1Q9H4G8 78 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 CYTL1Q9NRR1 136 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 LINC00474Q9P2X8 69 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 PKIGQ9Y2B9 76 aa3.44□□□□□ -1.86
PDE4D-229ENST00000638939 LPAP08519 4548 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
PDE4D-229ENST00000638939 F2Z2F3 143 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 UBE2L6O14933 153 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 TRGC1P0CF51 173 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 CTRLP40313 264 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 RPL35P42766 123 aaKnown RBP3.43□□□□□ -1.86
PDE4D-229ENST00000638939 RPS10P46783 165 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms