RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 C20orf203Q8NBC4 194 aa15.39■□□□□ 0.05
SCARB2-212ENST00000638663 RPL36ALQ969Q0 106 aaKnown RBP15.39■□□□□ 0.05
SCARB2-212ENST00000638663 IGIPA6NJ69 53 aa15.38■□□□□ 0.05
SCARB2-212ENST00000638663 ZMAT4Q9H898 229 aa15.38■□□□□ 0.05
SCARB2-212ENST00000638663 GAGE12JA6NER3 117 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 LYRM9A8MSI8 78 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 HSBP1L1C9JCN9 74 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 GAGE1Q13065 139 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 GAGE4Q13068 117 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 GAGE5Q13069 117 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 GAGE13Q4V321 117 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 BAALCQ8WXS3 180 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 TRBV6-4A0A1B0GX49 114 aa15.37■□□□□ 0.05
SCARB2-212ENST00000638663 A0A087WX48 190 aa15.36■□□□□ 0.05
SCARB2-212ENST00000638663 COTL1Q14019 142 aa15.36■□□□□ 0.05
SCARB2-212ENST00000638663 LOC100131303A0A0U1RQF7 123 aa15.35■□□□□ 0.05
SCARB2-212ENST00000638663 MRPL35Q9NZE8 188 aaKnown RBP15.35■□□□□ 0.05
SCARB2-212ENST00000638663 ANK2Q01484 3957 aa15.35■□□□□ 0.05
SCARB2-212ENST00000638663 TRAV12-1A0A0B4J245 112 aa15.35■□□□□ 0.05
SCARB2-212ENST00000638663 TMEM141Q96I45 108 aa15.35■□□□□ 0.05
SCARB2-212ENST00000638663 TIMM17AQ99595 171 aa15.35■□□□□ 0.05
SCARB2-212ENST00000638663 UBE2D3P61077 147 aa15.34■□□□□ 0.05
SCARB2-212ENST00000638663 UBE2D2P62837 147 aa15.34■□□□□ 0.05
SCARB2-212ENST00000638663 CHCHD7Q9BUK0 85 aa15.34■□□□□ 0.05
SCARB2-212ENST00000638663 IGLC3P0DOY3 106 aa15.33■□□□□ 0.05
SCARB2-212ENST00000638663 C14orf144Q96I85 54 aa15.33■□□□□ 0.05
SCARB2-212ENST00000638663 RETNQ9HD89 108 aa15.33■□□□□ 0.05
SCARB2-212ENST00000638663 DPM2O94777 84 aa15.33■□□□□ 0.04
SCARB2-212ENST00000638663 IGKCP01834 107 aa15.33■□□□□ 0.04
SCARB2-212ENST00000638663 STPG4Q8N801 248 aa15.33■□□□□ 0.04
SCARB2-212ENST00000638663 MIEN1Q9BRT3 115 aa15.33■□□□□ 0.04
SCARB2-212ENST00000638663 CELA1Q9UNI1 258 aa15.33■□□□□ 0.04
SCARB2-212ENST00000638663 PRSS29PA6NIE9 313 aa15.32■□□□□ 0.04
SCARB2-212ENST00000638663 ZC2HC1BQ5TFG8 222 aa15.32■□□□□ 0.04
SCARB2-212ENST00000638663 OPRPNQ99935 248 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-212ENST00000638663 DAZ4Q86SG3 579 aaKnown RBP15.31■□□□□ 0.04
SCARB2-212ENST00000638663 PRADC1Q9BSG0 188 aa15.31■□□□□ 0.04
SCARB2-212ENST00000638663 DAZ3Q9NR90 486 aaKnown RBP15.31■□□□□ 0.04
SCARB2-212ENST00000638663 HHLA3Q9XRX5 114 aa15.31■□□□□ 0.04
SCARB2-212ENST00000638663 CHTOPQ9Y3Y2 248 aaKnown RBP15.31■□□□□ 0.04
SCARB2-212ENST00000638663 NOTCH1P46531 2555 aa15.31■□□□□ 0.04
SCARB2-212ENST00000638663 PRB2P02812 416 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-212ENST00000638663 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-212ENST00000638663 IGKV2-29A2NJV5 120 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-212ENST00000638663 F8VRH5 84 aa15.3■□□□□ 0.04
SCARB2-212ENST00000638663 TCTAP57738 103 aa15.3■□□□□ 0.04
SCARB2-212ENST00000638663 DAD1P61803 113 aa15.3■□□□□ 0.04
SCARB2-212ENST00000638663 ANKRD39Q53RE8 183 aa15.29■□□□□ 0.04
SCARB2-212ENST00000638663 PMVKQ15126 192 aa15.29■□□□□ 0.04
SCARB2-212ENST00000638663 UQCR10Q9UDW1 63 aa15.29■□□□□ 0.04
SCARB2-212ENST00000638663 DNAH3Q8TD57 4116 aa15.29■□□□□ 0.04
SCARB2-212ENST00000638663 CEMP1Q6PRD7 247 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-212ENST00000638663 CST9LQ9H4G1 147 aa15.28■□□□□ 0.04
SCARB2-212ENST00000638663 SPART-AS1P0CW21 52 aa15.27■□□□□ 0.04
SCARB2-212ENST00000638663 NTM-AS1Q6ZSK4 140 aa15.27■□□□□ 0.04
SCARB2-212ENST00000638663 IGLV4-3A0A075B6K6 122 aa15.27■□□□□ 0.03
SCARB2-212ENST00000638663 PLNP26678 52 aa15.27■□□□□ 0.03
SCARB2-212ENST00000638663 PYGO1Q9Y3Y4 419 aa15.27■□□□□ 0.03
SCARB2-212ENST00000638663 CRYBA4P53673 196 aa15.26■□□□□ 0.03
SCARB2-212ENST00000638663 DEFA6Q01524 100 aa15.25■□□□□ 0.03
SCARB2-212ENST00000638663 TP73-AS1Q9UF72 201 aa15.25■□□□□ 0.03
SCARB2-212ENST00000638663 PRO0255Q9UI72 69 aa15.25■□□□□ 0.03
SCARB2-212ENST00000638663 UBE2D4Q9Y2X8 147 aa15.25■□□□□ 0.03
SCARB2-212ENST00000638663 GYPEP15421 78 aa15.24■□□□□ 0.03
SCARB2-212ENST00000638663 FAM104AQ969W3 186 aa15.24■□□□□ 0.03
SCARB2-212ENST00000638663 LINC00694P0DN24 101 aa15.23■□□□□ 0.03
SCARB2-212ENST00000638663 SPANXA1Q9NS26 97 aa15.23■□□□□ 0.03
SCARB2-212ENST00000638663 ATP5G1P05496 136 aa15.23■□□□□ 0.03
SCARB2-212ENST00000638663 VCX2Q9H322 139 aa15.23■□□□□ 0.03
SCARB2-212ENST00000638663 NBEAL1Q6ZS30 2694 aa15.22■□□□□ 0.03
SCARB2-212ENST00000638663 IGLV4-69A0A075B6H9 119 aa15.22■□□□□ 0.03
SCARB2-212ENST00000638663 GTSF1LQ9H1H1 148 aa15.22■□□□□ 0.03
SCARB2-212ENST00000638663 PAX4O43316 350 aa15.21■□□□□ 0.03
SCARB2-212ENST00000638663 RNASE13Q5GAN3 156 aaKnown RBP15.21■□□□□ 0.03
SCARB2-212ENST00000638663 PAPPA-AS1Q5QFB9 102 aa15.21■□□□□ 0.03
SCARB2-212ENST00000638663 SLC25A34Q6PIV7 304 aa15.21■□□□□ 0.03
SCARB2-212ENST00000638663 MGAM2Q2M2H8 2515 aa15.21■□□□□ 0.03
SCARB2-212ENST00000638663 K7EIL1 84 aa15.21■□□□□ 0.02
SCARB2-212ENST00000638663 A0A0J9YY99 117 aa15.2■□□□□ 0.02
SCARB2-212ENST00000638663 COX8AP10176 69 aa15.2■□□□□ 0.02
SCARB2-212ENST00000638663 NMUP48645 174 aa15.2■□□□□ 0.02
SCARB2-212ENST00000638663 HNRNPA3P51991 378 aaKnown RBP15.2■□□□□ 0.02
SCARB2-212ENST00000638663 SBSPONQ8IVN8 264 aa15.2■□□□□ 0.02
SCARB2-212ENST00000638663 C11orf86A6NJI1 115 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 HTN3P15516 51 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 IGKV2D-26A0A0A0MRZ7 120 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 F5H768 121 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 NPSP0C0P6 89 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 KPRPQ5T749 579 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-212ENST00000638663 Q6ZUT4 128 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 VSIG2Q96IQ7 327 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 AMELXQ99217 191 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 TMEM243Q9BU79 118 aa15.19■□□□□ 0.02
SCARB2-212ENST00000638663 TEX48A0A1B0GUV7 120 aa15.18■□□□□ 0.02
SCARB2-212ENST00000638663 ATP6V0E2Q8NHE4 81 aa15.18■□□□□ 0.02
SCARB2-212ENST00000638663 TRBV25-1A0A075B6N4 114 aa15.17■□□□□ 0.02
SCARB2-212ENST00000638663 FGF6P10767 208 aa15.17■□□□□ 0.02
SCARB2-212ENST00000638663 CTAG1AP78358 180 aa15.17■□□□□ 0.02
SCARB2-212ENST00000638663 DEFB121Q5J5C9 76 aa15.17■□□□□ 0.02
SCARB2-212ENST00000638663 DGAT2L7PQ6IED9 249 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms