RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 GAGE12IP0CL82 117 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.64
SCN8A-214ENST00000637709 PMVKQ15126 192 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 OR4C5Q8NGB2 326 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 PRADC1Q9BSG0 188 aa11.02□□□□□ -0.65
SCN8A-214ENST00000637709 K7ERJ3 54 aa11.01□□□□□ -0.65
SCN8A-214ENST00000637709 FXYD2P54710 66 aa11.01□□□□□ -0.65
SCN8A-214ENST00000637709 LOC100131303A0A0U1RQF7 123 aa11□□□□□ -0.65
SCN8A-214ENST00000637709 OR11H2Q8NH07 326 aa11□□□□□ -0.65
SCN8A-214ENST00000637709 ANK2Q01484 3957 aa11□□□□□ -0.65
SCN8A-214ENST00000637709 PLAC8L1A1L4L8 177 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 RS1O15537 224 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
SCN8A-214ENST00000637709 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 SPXQ9BT56 116 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 CSNK1G2-AS1Q8NCQ2 148 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 ORAOV1Q8WV07 137 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
SCN8A-214ENST00000637709 CCL25O15444 150 aa10.98□□□□□ -0.65
SCN8A-214ENST00000637709 VAMP3Q15836 100 aa10.98□□□□□ -0.65
SCN8A-214ENST00000637709 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
SCN8A-214ENST00000637709 DEFB4AO15263 64 aa10.98□□□□□ -0.65
SCN8A-214ENST00000637709 HSD52Q0P140 79 aa10.98□□□□□ -0.65
SCN8A-214ENST00000637709 GAGE12JA6NER3 117 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 CRLF1O75462 422 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 GAGE1Q13065 139 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 GAGE4Q13068 117 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 GAGE5Q13069 117 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 RHOHQ15669 191 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 GAGE13Q4V321 117 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 SLC25A29Q8N8R3 303 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 IL17DQ8TAD2 202 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 TMEM141Q96I45 108 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 ZNF815PA8K554 130 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 AMMECR1LQ6DCA0 310 aa10.97□□□□□ -0.65
SCN8A-214ENST00000637709 VCX2Q9H322 139 aa10.96□□□□□ -0.65
SCN8A-214ENST00000637709 DEFB130BP0DP73 79 aa10.96□□□□□ -0.66
SCN8A-214ENST00000637709 DEFB130AP0DP74 79 aa10.96□□□□□ -0.66
SCN8A-214ENST00000637709 RRN3P1Q2M238 152 aa10.96□□□□□ -0.66
SCN8A-214ENST00000637709 BAHCC1Q9P281 2608 aa10.96□□□□□ -0.66
SCN8A-214ENST00000637709 MYMXA0A1B0GTQ4 84 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
SCN8A-214ENST00000637709 E9PLD3 99 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 RHODO00212 210 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 SIVA1O15304 175 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 LINC00694P0DN24 101 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 Q6ZUT4 128 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 HIST1H4GQ99525 98 aa10.95□□□□□ -0.66
SCN8A-214ENST00000637709 A8MZ25 164 aa10.94□□□□□ -0.66
SCN8A-214ENST00000637709 H3BUT2 72 aa10.94□□□□□ -0.66
SCN8A-214ENST00000637709 SCGB1D4Q6XE38 83 aa10.94□□□□□ -0.66
SCN8A-214ENST00000637709 COTL1Q14019 142 aa10.94□□□□□ -0.66
SCN8A-214ENST00000637709 UBE2D4Q9Y2X8 147 aa10.93□□□□□ -0.66
SCN8A-214ENST00000637709 TRBV7-3A0A075B6L6 115 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 TRAV8-3A0A0A6YYJ7 113 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 K7EQD1 137 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 SEC11AP67812 179 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 C16orf74Q96GX8 76 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 DEFB135Q30KP9 77 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 NTM-AS1Q6ZSK4 140 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 CEND1Q8N111 149 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
SCN8A-214ENST00000637709 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
SCN8A-214ENST00000637709 ZNF22P17026 224 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-214ENST00000637709 COL6A5A8TX70 2615 aa10.91□□□□□ -0.66
SCN8A-214ENST00000637709 A6NDN8 102 aa10.91□□□□□ -0.66
SCN8A-214ENST00000637709 PIK3CD-AS1Q5SR53 167 aa10.91□□□□□ -0.66
SCN8A-214ENST00000637709 TRAV4A0A0B4J268 109 aa10.9□□□□□ -0.66
SCN8A-214ENST00000637709 PTH2Q96A98 100 aa10.9□□□□□ -0.66
SCN8A-214ENST00000637709 C1QTNF4Q9BXJ3 329 aa10.9□□□□□ -0.66
SCN8A-214ENST00000637709 HIGD1BQ9P298 99 aa10.9□□□□□ -0.66
SCN8A-214ENST00000637709 TRGV4A0A0C4DH28 118 aa10.9□□□□□ -0.67
SCN8A-214ENST00000637709 CMC4P56277 68 aaPredicted RBP10.9□□□□□ -0.67
SCN8A-214ENST00000637709 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
SCN8A-214ENST00000637709 UBE2V1Q13404 147 aa10.89□□□□□ -0.67
SCN8A-214ENST00000637709 CITED1Q99966 193 aa10.89□□□□□ -0.67
SCN8A-214ENST00000637709 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
SCN8A-214ENST00000637709 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
SCN8A-214ENST00000637709 FAM110AQ9BQ89 295 aa10.89□□□□□ -0.67
SCN8A-214ENST00000637709 A0A096LPF7 62 aa10.88□□□□□ -0.67
SCN8A-214ENST00000637709 CYSRT1A8MQ03 144 aa10.88□□□□□ -0.67
SCN8A-214ENST00000637709 HERVK_113P61574 105 aa10.88□□□□□ -0.67
SCN8A-214ENST00000637709 J3QQQ9 107 aa10.87□□□□□ -0.67
SCN8A-214ENST00000637709 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
SCN8A-214ENST00000637709 DGAT2L7PQ6IED9 249 aa10.87□□□□□ -0.67
SCN8A-214ENST00000637709 SFTA2Q6UW10 78 aa10.87□□□□□ -0.67
SCN8A-214ENST00000637709 AMELXQ99217 191 aa10.87□□□□□ -0.67
SCN8A-214ENST00000637709 TMEM223A0PJW6 202 aa10.87□□□□□ -0.67
SCN8A-214ENST00000637709 SRSF9Q13242 221 aaKnown RBP eCLIP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 291.7 ms