RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 TRBV7-3A0A075B6L6 115 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 C20orf202A1L168 122 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 I3L3M4 83 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 TSHBP01222 138 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 ATP5G1P05496 136 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 CRYBA4P53673 196 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 ORMDL2Q53FV1 153 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 SPATA12Q7Z6I5 190 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 HHLA3Q9XRX5 114 aa11.76□□□□□ -0.53
CLCN2-220ENST00000637538 UBE2D3P61077 147 aa11.75□□□□□ -0.53
CLCN2-220ENST00000637538 UBE2D2P62837 147 aa11.75□□□□□ -0.53
CLCN2-220ENST00000637538 RPL36AP83881 106 aaKnown RBP11.75□□□□□ -0.53
CLCN2-220ENST00000637538 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
CLCN2-220ENST00000637538 RPL36ALQ969Q0 106 aaKnown RBP11.75□□□□□ -0.53
CLCN2-220ENST00000637538 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
CLCN2-220ENST00000637538 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
CLCN2-220ENST00000637538 LBHQ53QV2 105 aaPredicted RBP11.74□□□□□ -0.53
CLCN2-220ENST00000637538 PRO0255Q9UI72 69 aa11.74□□□□□ -0.53
CLCN2-220ENST00000637538 PRADC1Q9BSG0 188 aa11.73□□□□□ -0.53
CLCN2-220ENST00000637538 PAM16Q9Y3D7 125 aa11.73□□□□□ -0.53
CLCN2-220ENST00000637538 GAGE12JA6NER3 117 aa11.72□□□□□ -0.53
CLCN2-220ENST00000637538 GAGE1Q13065 139 aa11.72□□□□□ -0.53
CLCN2-220ENST00000637538 GAGE4Q13068 117 aa11.72□□□□□ -0.53
CLCN2-220ENST00000637538 GAGE5Q13069 117 aa11.72□□□□□ -0.53
CLCN2-220ENST00000637538 GAGE13Q4V321 117 aa11.72□□□□□ -0.53
CLCN2-220ENST00000637538 ZMAT4Q9H898 229 aa11.72□□□□□ -0.53
CLCN2-220ENST00000637538 COL7A1Q02388 2944 aa11.72□□□□□ -0.53
CLCN2-220ENST00000637538 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.53
CLCN2-220ENST00000637538 VSIG2Q96IQ7 327 aa11.71□□□□□ -0.53
CLCN2-220ENST00000637538 NUDT3O95989 172 aa11.7□□□□□ -0.54
CLCN2-220ENST00000637538 SPATA45Q537H7 98 aa11.7□□□□□ -0.54
CLCN2-220ENST00000637538 LINC01545Q5VT33 79 aa11.7□□□□□ -0.54
CLCN2-220ENST00000637538 DAZ4Q86SG3 579 aaKnown RBP11.7□□□□□ -0.54
CLCN2-220ENST00000637538 DEFB104AQ8WTQ1 72 aa11.7□□□□□ -0.54
CLCN2-220ENST00000637538 TOMM6Q96B49 74 aa11.7□□□□□ -0.54
CLCN2-220ENST00000637538 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
CLCN2-220ENST00000637538 DAZ3Q9NR90 486 aaKnown RBP11.7□□□□□ -0.54
CLCN2-220ENST00000637538 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
CLCN2-220ENST00000637538 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
CLCN2-220ENST00000637538 PAX4O43316 350 aa11.69□□□□□ -0.54
CLCN2-220ENST00000637538 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
CLCN2-220ENST00000637538 Q6ZTC4 211 aa11.69□□□□□ -0.54
CLCN2-220ENST00000637538 IFI27L1Q96BM0 104 aa11.69□□□□□ -0.54
CLCN2-220ENST00000637538 F5H768 121 aa11.68□□□□□ -0.54
CLCN2-220ENST00000637538 GYPEP15421 78 aa11.68□□□□□ -0.54
CLCN2-220ENST00000637538 C20orf203Q8NBC4 194 aa11.68□□□□□ -0.54
CLCN2-220ENST00000637538 C11orf45Q8TAV5 145 aa11.68□□□□□ -0.54
CLCN2-220ENST00000637538 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
CLCN2-220ENST00000637538 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
CLCN2-220ENST00000637538 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
CLCN2-220ENST00000637538 G0S2P27469 103 aa11.67□□□□□ -0.54
CLCN2-220ENST00000637538 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
CLCN2-220ENST00000637538 COTL1Q14019 142 aa11.67□□□□□ -0.54
CLCN2-220ENST00000637538 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
CLCN2-220ENST00000637538 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
CLCN2-220ENST00000637538 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
CLCN2-220ENST00000637538 STAB2Q8WWQ8 2551 aa11.67□□□□□ -0.54
CLCN2-220ENST00000637538 TRAV26-1A0A087WT03 109 aa11.66□□□□□ -0.54
CLCN2-220ENST00000637538 GTSF1LQ9H1H1 148 aa11.66□□□□□ -0.54
CLCN2-220ENST00000637538 CYSLTR1Q9Y271 337 aa11.66□□□□□ -0.54
CLCN2-220ENST00000637538 A0A0J9YY99 117 aa11.65□□□□□ -0.54
CLCN2-220ENST00000637538 LINC01549A6NIU2 74 aa11.65□□□□□ -0.54
CLCN2-220ENST00000637538 ATP5LO75964 103 aa11.65□□□□□ -0.54
CLCN2-220ENST00000637538 HTN3P15516 51 aa11.65□□□□□ -0.54
CLCN2-220ENST00000637538 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
CLCN2-220ENST00000637538 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.54
CLCN2-220ENST00000637538 IGIPA6NJ69 53 aa11.65□□□□□ -0.55
CLCN2-220ENST00000637538 IGLC3P0DOY3 106 aa11.65□□□□□ -0.55
CLCN2-220ENST00000637538 UQCR10Q9UDW1 63 aa11.65□□□□□ -0.55
CLCN2-220ENST00000637538 HSBP1L1C9JCN9 74 aa11.64□□□□□ -0.55
CLCN2-220ENST00000637538 H3BNG1 76 aa11.64□□□□□ -0.55
CLCN2-220ENST00000637538 ERASQ7Z444 233 aa11.64□□□□□ -0.55
CLCN2-220ENST00000637538 H0Y8G0 127 aa11.63□□□□□ -0.55
CLCN2-220ENST00000637538 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
CLCN2-220ENST00000637538 ATP6V0E2Q8NHE4 81 aa11.63□□□□□ -0.55
CLCN2-220ENST00000637538 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
CLCN2-220ENST00000637538 TIMM17AQ99595 171 aa11.62□□□□□ -0.55
CLCN2-220ENST00000637538 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
CLCN2-220ENST00000637538 DEFB131BA0A096LNP1 70 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 A0A096LPF7 62 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
CLCN2-220ENST00000637538 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
CLCN2-220ENST00000637538 TMEM97Q5BJF2 176 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 TMEM141Q96I45 108 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 ICOSQ9Y6W8 199 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
CLCN2-220ENST00000637538 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
CLCN2-220ENST00000637538 PRSS1P07477 247 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
CLCN2-220ENST00000637538 TRAV10A0A0B4J240 114 aa11.59□□□□□ -0.55
CLCN2-220ENST00000637538 hDV102S1A0JD36 115 aa11.59□□□□□ -0.55
CLCN2-220ENST00000637538 SH2D6Q7Z4S9 175 aa11.59□□□□□ -0.55
CLCN2-220ENST00000637538 PMCHL2Q9BQD1 86 aa11.59□□□□□ -0.55
CLCN2-220ENST00000637538 TIMM21Q9BVV7 248 aa11.59□□□□□ -0.55
CLCN2-220ENST00000637538 KMT2CQ8NEZ4 4911 aaKnown RBP11.59□□□□□ -0.55
CLCN2-220ENST00000637538 TRBV25-1A0A075B6N4 114 aa11.58□□□□□ -0.56
CLCN2-220ENST00000637538 NPSP0C0P6 89 aa11.58□□□□□ -0.56
CLCN2-220ENST00000637538 BAALCQ8WXS3 180 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms