RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 SULT1A2P50226 295 aa11.82□□□□□ -0.52
CLN6-220ENST00000637450 WDR73Q6P4I2 378 aa11.82□□□□□ -0.52
CLN6-220ENST00000637450 BIN3Q9NQY0 253 aa11.82□□□□□ -0.52
CLN6-220ENST00000637450 MED9Q9NWA0 146 aa11.82□□□□□ -0.52
CLN6-220ENST00000637450 hDV102S1A0JD36 115 aa11.81□□□□□ -0.52
CLN6-220ENST00000637450 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
CLN6-220ENST00000637450 NUDT10Q8NFP7 164 aa11.8□□□□□ -0.52
CLN6-220ENST00000637450 NUDT11Q96G61 164 aa11.8□□□□□ -0.52
CLN6-220ENST00000637450 SLPIP03973 132 aa11.79□□□□□ -0.52
CLN6-220ENST00000637450 UBE2L6O14933 153 aa11.78□□□□□ -0.52
CLN6-220ENST00000637450 BCL2P10415 239 aa11.78□□□□□ -0.52
CLN6-220ENST00000637450 CTRLP40313 264 aa11.78□□□□□ -0.52
CLN6-220ENST00000637450 COTL1Q14019 142 aa11.78□□□□□ -0.52
CLN6-220ENST00000637450 CNFNQ9BYD5 112 aa11.78□□□□□ -0.52
CLN6-220ENST00000637450 AP5S1Q9NUS5 200 aa11.78□□□□□ -0.52
CLN6-220ENST00000637450 IGHV3-64A0A075B6Q5 118 aa11.77□□□□□ -0.53
CLN6-220ENST00000637450 AMTP48728 403 aa11.77□□□□□ -0.53
CLN6-220ENST00000637450 TWIST1Q15672 202 aa11.77□□□□□ -0.53
CLN6-220ENST00000637450 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
CLN6-220ENST00000637450 GATD1Q8NB37 220 aa11.76□□□□□ -0.53
CLN6-220ENST00000637450 DPH3Q96FX2 82 aa11.75□□□□□ -0.53
CLN6-220ENST00000637450 OCC1Q8TAD7 63 aa11.74□□□□□ -0.53
CLN6-220ENST00000637450 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
CLN6-220ENST00000637450 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
CLN6-220ENST00000637450 RPP21Q9H633 154 aaKnown RBP11.74□□□□□ -0.53
CLN6-220ENST00000637450 PLA2G2DQ9UNK4 145 aa11.74□□□□□ -0.53
CLN6-220ENST00000637450 A0A087WYN8 130 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 GAGE12HA6NDE8 117 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 K7EN84 100 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 TAGLN2P37802 199 aaKnown RBP11.73□□□□□ -0.53
CLN6-220ENST00000637450 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 SLC51BQ86UW2 128 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 SPACA4Q8TDM5 124 aa11.73□□□□□ -0.53
CLN6-220ENST00000637450 CHTF8P0CG12 524 aa11.72□□□□□ -0.53
CLN6-220ENST00000637450 Q6ZRU5 148 aa11.72□□□□□ -0.53
CLN6-220ENST00000637450 TCTE3Q8IZS6 198 aa11.72□□□□□ -0.53
CLN6-220ENST00000637450 IGKV3OR2-268A0A0C4DH90 116 aa11.71□□□□□ -0.53
CLN6-220ENST00000637450 Q6ZNX1 250 aa11.71□□□□□ -0.53
CLN6-220ENST00000637450 GTSF1Q8WW33 167 aa11.71□□□□□ -0.53
CLN6-220ENST00000637450 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
CLN6-220ENST00000637450 NCR2O95944 276 aa11.7□□□□□ -0.54
CLN6-220ENST00000637450 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
CLN6-220ENST00000637450 FOXA3P55318 350 aaPredicted RBP11.7□□□□□ -0.54
CLN6-220ENST00000637450 H7C423 109 aa11.69□□□□□ -0.54
CLN6-220ENST00000637450 RPS10P46783 165 aaKnown RBP11.69□□□□□ -0.54
CLN6-220ENST00000637450 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
CLN6-220ENST00000637450 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
CLN6-220ENST00000637450 CHCHD10Q8WYQ3 142 aaPredicted RBP11.69□□□□□ -0.54
CLN6-220ENST00000637450 PLAC8Q9NZF1 115 aa11.69□□□□□ -0.54
CLN6-220ENST00000637450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
CLN6-220ENST00000637450 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
CLN6-220ENST00000637450 COX6A2Q02221 97 aa11.68□□□□□ -0.54
CLN6-220ENST00000637450 TEX261Q6UWH6 196 aa11.68□□□□□ -0.54
CLN6-220ENST00000637450 TNXBP22105 4242 aa11.67□□□□□ -0.54
CLN6-220ENST00000637450 SDHAF1A6NFY7 115 aa11.67□□□□□ -0.54
CLN6-220ENST00000637450 APCSP02743 223 aa11.67□□□□□ -0.54
CLN6-220ENST00000637450 FGF6P10767 208 aa11.67□□□□□ -0.54
CLN6-220ENST00000637450 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
CLN6-220ENST00000637450 RNASEKQ6P5S7 137 aaKnown RBP11.67□□□□□ -0.54
CLN6-220ENST00000637450 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
CLN6-220ENST00000637450 NDUFS6O75380 124 aaKnown RBP11.66□□□□□ -0.54
CLN6-220ENST00000637450 TMEM250H0YL14 139 aa11.65□□□□□ -0.54
CLN6-220ENST00000637450 FAM231DQ6ZW35 169 aa11.65□□□□□ -0.54
CLN6-220ENST00000637450 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
CLN6-220ENST00000637450 GVQW2A0A096LPI5 108 aaPredicted RBP11.64□□□□□ -0.55
CLN6-220ENST00000637450 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
CLN6-220ENST00000637450 FAM231BA6NCW3 169 aa11.64□□□□□ -0.55
CLN6-220ENST00000637450 A8MWL6 223 aa11.64□□□□□ -0.55
CLN6-220ENST00000637450 I3L3M4 83 aa11.64□□□□□ -0.55
CLN6-220ENST00000637450 PHOX2AO14813 284 aa11.64□□□□□ -0.55
CLN6-220ENST00000637450 FOXI1Q12951 378 aa11.64□□□□□ -0.55
CLN6-220ENST00000637450 C7orf33Q8WU49 177 aa11.64□□□□□ -0.55
CLN6-220ENST00000637450 ZNF25P17030 456 aaPredicted RBP11.63□□□□□ -0.55
CLN6-220ENST00000637450 PMCHP20382 165 aa11.63□□□□□ -0.55
CLN6-220ENST00000637450 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
CLN6-220ENST00000637450 OR5A1Q8NGJ0 315 aa11.63□□□□□ -0.55
CLN6-220ENST00000637450 CT83Q5H943 113 aa11.62□□□□□ -0.55
CLN6-220ENST00000637450 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
CLN6-220ENST00000637450 GAS8-AS1O95177 125 aa11.61□□□□□ -0.55
CLN6-220ENST00000637450 ESDP10768 282 aa11.61□□□□□ -0.55
CLN6-220ENST00000637450 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
CLN6-220ENST00000637450 LYPD6BQ8NI32 183 aa11.61□□□□□ -0.55
CLN6-220ENST00000637450 TMEM101Q96IK0 257 aa11.61□□□□□ -0.55
CLN6-220ENST00000637450 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
CLN6-220ENST00000637450 XCL1P47992 114 aa11.6□□□□□ -0.55
CLN6-220ENST00000637450 STPG4Q8N801 248 aa11.6□□□□□ -0.55
CLN6-220ENST00000637450 BTF3L4Q96K17 158 aa11.6□□□□□ -0.55
CLN6-220ENST00000637450 FAM210AQ96ND0 272 aa11.6□□□□□ -0.55
CLN6-220ENST00000637450 TSHBP01222 138 aa11.59□□□□□ -0.55
CLN6-220ENST00000637450 ST20Q9HBF5 79 aa11.59□□□□□ -0.55
CLN6-220ENST00000637450 A0A096LNI7 61 aa11.58□□□□□ -0.56
CLN6-220ENST00000637450 CCL25O15444 150 aa11.58□□□□□ -0.56
CLN6-220ENST00000637450 POLR2KP53803 58 aaKnown RBP11.58□□□□□ -0.56
CLN6-220ENST00000637450 ALKAL2Q6UX46 152 aa11.58□□□□□ -0.56
CLN6-220ENST00000637450 BORCS7Q96B45 105 aa11.58□□□□□ -0.56
CLN6-220ENST00000637450 TMEM191AQ9H0A3 160 aa11.58□□□□□ -0.56
CLN6-220ENST00000637450 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms