RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 GAGE4Q13068 117 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 GAGE5Q13069 117 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 RHOHQ15669 191 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 GAGE13Q4V321 117 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 ORMDL2Q53FV1 153 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 RPL36ALQ969Q0 106 aaKnown RBP14.8□□□□□ -0.04
CLN8-213ENST00000637156 PRO0255Q9UI72 69 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 IGHV3-38A0A0C4DH36 116 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 TSHBP01222 138 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 PHLDA1Q8WV24 401 aaPredicted RBP14.8□□□□□ -0.04
CLN8-213ENST00000637156 NUDT3O95989 172 aa14.79□□□□□ -0.04
CLN8-213ENST00000637156 Q8N976 141 aa14.79□□□□□ -0.04
CLN8-213ENST00000637156 B9D2Q9BPU9 175 aa14.79□□□□□ -0.04
CLN8-213ENST00000637156 PRADC1Q9BSG0 188 aa14.79□□□□□ -0.04
CLN8-213ENST00000637156 VAMP8Q9BV40 100 aa14.79□□□□□ -0.04
CLN8-213ENST00000637156 ZMAT4Q9H898 229 aa14.79□□□□□ -0.04
CLN8-213ENST00000637156 BTF3P20290 206 aaKnown RBP14.78□□□□□ -0.04
CLN8-213ENST00000637156 UBE2D3P61077 147 aa14.78□□□□□ -0.04
CLN8-213ENST00000637156 UBE2D2P62837 147 aa14.78□□□□□ -0.04
CLN8-213ENST00000637156 C3orf79P0CE67 100 aa14.78□□□□□ -0.04
CLN8-213ENST00000637156 VSIG2Q96IQ7 327 aa14.78□□□□□ -0.04
CLN8-213ENST00000637156 MRPL52Q86TS9 123 aaKnown RBP14.77□□□□□ -0.05
CLN8-213ENST00000637156 F5H768 121 aa14.76□□□□□ -0.05
CLN8-213ENST00000637156 HTN3P15516 51 aa14.76□□□□□ -0.05
CLN8-213ENST00000637156 C11orf45Q8TAV5 145 aa14.76□□□□□ -0.05
CLN8-213ENST00000637156 A0A0J9YY99 117 aa14.75□□□□□ -0.05
CLN8-213ENST00000637156 PAX4O43316 350 aa14.75□□□□□ -0.05
CLN8-213ENST00000637156 GYPEP15421 78 aa14.75□□□□□ -0.05
CLN8-213ENST00000637156 NANOS2P60321 138 aaKnown RBP14.75□□□□□ -0.05
CLN8-213ENST00000637156 Q6ZTC4 211 aa14.75□□□□□ -0.05
CLN8-213ENST00000637156 DAZ4Q86SG3 579 aaKnown RBP14.75□□□□□ -0.05
CLN8-213ENST00000637156 DAZ3Q9NR90 486 aaKnown RBP14.75□□□□□ -0.05
CLN8-213ENST00000637156 LINC00694P0DN24 101 aa14.74□□□□□ -0.05
CLN8-213ENST00000637156 C2orf66Q6UXQ4 117 aa14.74□□□□□ -0.05
CLN8-213ENST00000637156 TOMM6Q96B49 74 aa14.74□□□□□ -0.05
CLN8-213ENST00000637156 HSPB8Q9UJY1 196 aa14.74□□□□□ -0.05
CLN8-213ENST00000637156 TRAV26-1A0A087WT03 109 aa14.74□□□□□ -0.05
CLN8-213ENST00000637156 MIEN1Q9BRT3 115 aa14.74□□□□□ -0.05
CLN8-213ENST00000637156 PRKDCP78527 4128 aaKnown RBP14.73□□□□□ -0.05
CLN8-213ENST00000637156 RPL39P62891 51 aaKnown RBP14.72□□□□□ -0.05
CLN8-213ENST00000637156 NTM-AS1Q6ZSK4 140 aa14.72□□□□□ -0.05
CLN8-213ENST00000637156 C2orf88Q9BSF0 95 aa14.72□□□□□ -0.05
CLN8-213ENST00000637156 COTL1Q14019 142 aa14.72□□□□□ -0.05
CLN8-213ENST00000637156 C20orf203Q8NBC4 194 aa14.72□□□□□ -0.05
CLN8-213ENST00000637156 CHCHD7Q9BUK0 85 aa14.72□□□□□ -0.05
CLN8-213ENST00000637156 C20orf202A1L168 122 aa14.7□□□□□ -0.06
CLN8-213ENST00000637156 PAM16Q9Y3D7 125 aa14.7□□□□□ -0.06
CLN8-213ENST00000637156 G0S2P27469 103 aa14.69□□□□□ -0.06
CLN8-213ENST00000637156 IFI27L1Q96BM0 104 aa14.69□□□□□ -0.06
CLN8-213ENST00000637156 CYSLTR1Q9Y271 337 aa14.69□□□□□ -0.06
CLN8-213ENST00000637156 SYS1-DBNDD2H3BUS1 97 aa14.69□□□□□ -0.06
CLN8-213ENST00000637156 MAP1LC3CQ9BXW4 147 aa14.69□□□□□ -0.06
CLN8-213ENST00000637156 SPATA12Q7Z6I5 190 aa14.68□□□□□ -0.06
CLN8-213ENST00000637156 SCGB3A1Q96QR1 104 aa14.68□□□□□ -0.06
CLN8-213ENST00000637156 GTSF1LQ9H1H1 148 aa14.68□□□□□ -0.06
CLN8-213ENST00000637156 IGIPA6NJ69 53 aa14.67□□□□□ -0.06
CLN8-213ENST00000637156 ATP6V0E2Q8NHE4 81 aa14.67□□□□□ -0.06
CLN8-213ENST00000637156 A0A096LPF7 62 aa14.67□□□□□ -0.06
CLN8-213ENST00000637156 M0R143 59 aa14.67□□□□□ -0.06
CLN8-213ENST00000637156 ERASQ7Z444 233 aa14.67□□□□□ -0.06
CLN8-213ENST00000637156 STAB2Q8WWQ8 2551 aa14.66□□□□□ -0.06
CLN8-213ENST00000637156 SPATA45Q537H7 98 aa14.66□□□□□ -0.06
CLN8-213ENST00000637156 DEFB131BA0A096LNP1 70 aa14.65□□□□□ -0.06
CLN8-213ENST00000637156 H0Y8G0 127 aa14.65□□□□□ -0.06
CLN8-213ENST00000637156 ATP5LO75964 103 aa14.65□□□□□ -0.06
CLN8-213ENST00000637156 NHLRC4P0CG21 123 aaPredicted RBP14.65□□□□□ -0.06
CLN8-213ENST00000637156 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.65□□□□□ -0.06
CLN8-213ENST00000637156 IGKV2-29A2NJV5 120 aaPredicted RBP14.65□□□□□ -0.06
CLN8-213ENST00000637156 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.65□□□□□ -0.06
CLN8-213ENST00000637156 TRAV9-2A0A087WT02 112 aa14.64□□□□□ -0.07
CLN8-213ENST00000637156 PET117Q6UWS5 81 aa14.64□□□□□ -0.07
CLN8-213ENST00000637156 UQCR10Q9UDW1 63 aa14.64□□□□□ -0.07
CLN8-213ENST00000637156 LINC01549A6NIU2 74 aa14.63□□□□□ -0.07
CLN8-213ENST00000637156 TRBV6-8A0A0A6YYG3 113 aa14.63□□□□□ -0.07
CLN8-213ENST00000637156 PRSS1P07477 247 aa14.63□□□□□ -0.07
CLN8-213ENST00000637156 MRPL23Q16540 153 aaKnown RBP14.63□□□□□ -0.07
CLN8-213ENST00000637156 H3BNG1 76 aa14.62□□□□□ -0.07
CLN8-213ENST00000637156 IGLC3P0DOY3 106 aa14.62□□□□□ -0.07
CLN8-213ENST00000637156 CEMP1Q6PRD7 247 aaPredicted RBP14.62□□□□□ -0.07
CLN8-213ENST00000637156 FAM104AQ969W3 186 aa14.62□□□□□ -0.07
CLN8-213ENST00000637156 OPRPNQ99935 248 aaPredicted RBP14.62□□□□□ -0.07
CLN8-213ENST00000637156 TIMM17AQ99595 171 aa14.61□□□□□ -0.07
CLN8-213ENST00000637156 SNHG12Q9BXW3 62 aa14.61□□□□□ -0.07
CLN8-213ENST00000637156 UBE2D4Q9Y2X8 147 aa14.61□□□□□ -0.07
CLN8-213ENST00000637156 PYGO1Q9Y3Y4 419 aa14.61□□□□□ -0.07
CLN8-213ENST00000637156 ICOSQ9Y6W8 199 aa14.61□□□□□ -0.07
CLN8-213ENST00000637156 Q6ZN92 141 aa14.6□□□□□ -0.07
CLN8-213ENST00000637156 BAALCQ8WXS3 180 aa14.6□□□□□ -0.07
CLN8-213ENST00000637156 TMEM141Q96I45 108 aa14.6□□□□□ -0.07
CLN8-213ENST00000637156 PMCHL2Q9BQD1 86 aa14.6□□□□□ -0.07
CLN8-213ENST00000637156 TRBV25-1A0A075B6N4 114 aa14.59□□□□□ -0.07
CLN8-213ENST00000637156 LINC01545Q5VT33 79 aa14.59□□□□□ -0.07
CLN8-213ENST00000637156 TRAV10A0A0B4J240 114 aa14.59□□□□□ -0.07
CLN8-213ENST00000637156 TMEM97Q5BJF2 176 aa14.59□□□□□ -0.07
CLN8-213ENST00000637156 TMEM243Q9BU79 118 aa14.59□□□□□ -0.07
CLN8-213ENST00000637156 EREGO14944 169 aa14.58□□□□□ -0.08
CLN8-213ENST00000637156 ZC2HC1BQ5TFG8 222 aa14.58□□□□□ -0.08
CLN8-213ENST00000637156 IGLV4-3A0A075B6K6 122 aa14.57□□□□□ -0.08
CLN8-213ENST00000637156 LGALS9CQ6DKI2 356 aa14.57□□□□□ -0.08
CLN8-213ENST00000637156 SH2D6Q7Z4S9 175 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms