RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
CLN6-216ENST00000636876 S100A1P23297 94 aa10.9□□□□□ -0.66
CLN6-216ENST00000636876 RPL32P62910 135 aaKnown RBP10.9□□□□□ -0.66
CLN6-216ENST00000636876 FABP9Q0Z7S8 132 aa10.9□□□□□ -0.66
CLN6-216ENST00000636876 NBDYA0A0U1RRE5 68 aa10.89□□□□□ -0.67
CLN6-216ENST00000636876 SCO1O75880 301 aa10.89□□□□□ -0.67
CLN6-216ENST00000636876 TSHBP01222 138 aa10.89□□□□□ -0.67
CLN6-216ENST00000636876 AMTP48728 403 aa10.89□□□□□ -0.67
CLN6-216ENST00000636876 LINC01556Q5JQF7 62 aa10.89□□□□□ -0.67
CLN6-216ENST00000636876 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
CLN6-216ENST00000636876 TTC32Q5I0X7 151 aa10.88□□□□□ -0.67
CLN6-216ENST00000636876 NIT1Q86X76 327 aa10.88□□□□□ -0.67
CLN6-216ENST00000636876 CHCHD5Q9BSY4 110 aa10.88□□□□□ -0.67
CLN6-216ENST00000636876 TMEM243Q9BU79 118 aa10.88□□□□□ -0.67
CLN6-216ENST00000636876 TRAPPC1Q9Y5R8 145 aa10.88□□□□□ -0.67
CLN6-216ENST00000636876 M0R2N4 97 aa10.87□□□□□ -0.67
CLN6-216ENST00000636876 Q6ZR54 194 aa10.87□□□□□ -0.67
CLN6-216ENST00000636876 MAP1LC3AQ9H492 121 aa10.87□□□□□ -0.67
CLN6-216ENST00000636876 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
CLN6-216ENST00000636876 PKIAP61925 76 aa10.86□□□□□ -0.67
CLN6-216ENST00000636876 KIR2DL4Q99706 377 aa10.86□□□□□ -0.67
CLN6-216ENST00000636876 ALKBH7Q9BT30 221 aaPredicted RBP10.86□□□□□ -0.67
CLN6-216ENST00000636876 KRTAP1-5Q9BYS1 174 aa10.86□□□□□ -0.67
CLN6-216ENST00000636876 TRAV9-2A0A087WT02 112 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 COLCA2A8K830 154 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 K7EP13 123 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 IGHV3-30P01768 117 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 IGHV3-33P01772 117 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 IGHV3-30-3P0DP02 117 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 IGHV3-30-5P0DP03 117 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 FCER1GP30273 86 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 GAGE6Q13070 117 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 Q8N3U1 123 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 CHCHD7Q9BUK0 85 aa10.85□□□□□ -0.67
CLN6-216ENST00000636876 A0A087WX48 190 aa10.84□□□□□ -0.67
CLN6-216ENST00000636876 LOC389332A0A1B0GUA5 103 aa10.84□□□□□ -0.67
CLN6-216ENST00000636876 TMEM262E9PQX1 116 aa10.84□□□□□ -0.67
CLN6-216ENST00000636876 TCAPO15273 167 aa10.84□□□□□ -0.67
CLN6-216ENST00000636876 ESDP10768 282 aa10.84□□□□□ -0.67
CLN6-216ENST00000636876 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
CLN6-216ENST00000636876 Q8N8P6 123 aa10.83□□□□□ -0.68
CLN6-216ENST00000636876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.82□□□□□ -0.68
CLN6-216ENST00000636876 IGKV2-29A2NJV5 120 aaPredicted RBP10.82□□□□□ -0.68
CLN6-216ENST00000636876 UBE2L6O14933 153 aa10.82□□□□□ -0.68
CLN6-216ENST00000636876 MPV17L2Q567V2 206 aa10.82□□□□□ -0.68
CLN6-216ENST00000636876 FRAS1Q86XX4 4008 aa10.81□□□□□ -0.68
CLN6-216ENST00000636876 DNAH10Q8IVF4 4471 aa10.81□□□□□ -0.68
CLN6-216ENST00000636876 H7C423 109 aa10.81□□□□□ -0.68
CLN6-216ENST00000636876 RAB5AP20339 215 aa10.81□□□□□ -0.68
CLN6-216ENST00000636876 RBX1P62877 108 aa10.81□□□□□ -0.68
CLN6-216ENST00000636876 NXT2Q9NPJ8 142 aaKnown RBP10.81□□□□□ -0.68
CLN6-216ENST00000636876 DNAH2Q9P225 4427 aa10.81□□□□□ -0.68
CLN6-216ENST00000636876 IFI27P40305 119 aaPredicted RBP10.8□□□□□ -0.68
CLN6-216ENST00000636876 Q8N976 141 aa10.8□□□□□ -0.68
CLN6-216ENST00000636876 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
CLN6-216ENST00000636876 IBA57-AS1B1ANH7 110 aa10.79□□□□□ -0.68
CLN6-216ENST00000636876 TRGC2P03986 189 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 FGF6P10767 208 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 BTF3P20290 206 aaKnown RBP10.78□□□□□ -0.68
CLN6-216ENST00000636876 LAGE3Q14657 143 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 AMMECR1LQ6DCA0 310 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 C6orf223Q8N319 242 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 C20orf203Q8NBC4 194 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 PRSS3P2Q8NHM4 247 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 C18orf32Q8TCD1 76 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 KLK12Q9UKR0 248 aa10.78□□□□□ -0.68
CLN6-216ENST00000636876 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
CLN6-216ENST00000636876 K7EMI3 77 aa10.77□□□□□ -0.69
CLN6-216ENST00000636876 ANGP03950 147 aaKnown RBP10.77□□□□□ -0.69
CLN6-216ENST00000636876 C1orf134Q5TEV5 83 aa10.77□□□□□ -0.69
CLN6-216ENST00000636876 RNASEKQ6P5S7 137 aaKnown RBP10.77□□□□□ -0.69
CLN6-216ENST00000636876 MRPL52Q86TS9 123 aaKnown RBP10.77□□□□□ -0.69
CLN6-216ENST00000636876 TMEM18Q96B42 140 aa10.77□□□□□ -0.69
CLN6-216ENST00000636876 DNAH17Q9UFH2 4485 aa10.77□□□□□ -0.69
CLN6-216ENST00000636876 ZNF25P17030 456 aaPredicted RBP10.76□□□□□ -0.69
CLN6-216ENST00000636876 ORMDL2Q53FV1 153 aa10.76□□□□□ -0.69
CLN6-216ENST00000636876 LINC01546A6NGU7 62 aa10.75□□□□□ -0.69
CLN6-216ENST00000636876 RPL39P62891 51 aaKnown RBP10.75□□□□□ -0.69
CLN6-216ENST00000636876 SMAGPQ0VAQ4 97 aa10.75□□□□□ -0.69
CLN6-216ENST00000636876 FA2HQ7L5A8 372 aa10.75□□□□□ -0.69
CLN6-216ENST00000636876 Q9HAA7 133 aa10.75□□□□□ -0.69
CLN6-216ENST00000636876 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 NFE4Q86UQ8 179 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 LINC00269Q8N2A0 174 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 UBE2WQ96B02 151 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 TMEM101Q96IK0 257 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 TIMM21Q9BVV7 248 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 PRR34Q9NV39 138 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 UBE2D4Q9Y2X8 147 aa10.74□□□□□ -0.69
CLN6-216ENST00000636876 RTL8CO15255 209 aa10.73□□□□□ -0.69
CLN6-216ENST00000636876 ENHOQ6UWT2 76 aa10.73□□□□□ -0.69
CLN6-216ENST00000636876 CSDC2Q9Y534 153 aaKnown RBP10.73□□□□□ -0.69
CLN6-216ENST00000636876 CRPP02741 224 aa10.72□□□□□ -0.69
CLN6-216ENST00000636876 Q0VG73 95 aa10.72□□□□□ -0.69
CLN6-216ENST00000636876 DGAT2L7PQ6IED9 249 aa10.72□□□□□ -0.69
CLN6-216ENST00000636876 CLPSL2Q6UWE3 100 aa10.72□□□□□ -0.69
CLN6-216ENST00000636876 Q6ZRN7 208 aaPredicted RBP10.72□□□□□ -0.69
CLN6-216ENST00000636876 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
CLN6-216ENST00000636876 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms