RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 Q6ZSN1 163 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 FAM19A2Q8N3H0 131 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 PRSS3P2Q8NHM4 247 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 MRAP2Q96G30 205 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 UPK3BQ9BT76 320 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 MAP1LC3AQ9H492 121 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 EREGO14944 169 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 LINC00614P0C842 121 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 HTN3P15516 51 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 PMCHP20382 165 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 PMCHL1Q16048 86 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 UFSP1Q6NVU6 142 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 FA2HQ7L5A8 372 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 OR4C5Q8NGB2 326 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 DEFB104AQ8WTQ1 72 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 ZNF479Q96JC4 524 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 HIST1H2BLQ99880 126 aa5.12□□□□□ -1.59
CIITA-214ENST00000636238 TRGV2A0A075B6R0 118 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 H3BNG1 76 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 M0QY20 66 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 HSBP1O75506 76 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 ATP5G1P05496 136 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 DEFB130BP0DP73 79 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 DEFB130AP0DP74 79 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 ESDP10768 282 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 KRTAP10-2P60368 255 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 PIK3CD-AS1Q5SR53 167 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 NEGR1Q7Z3B1 354 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 OR10D4PQ8NGN7 298 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 Q9H8V8 135 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 Q9UF83 564 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 LAMTOR2Q9Y2Q5 125 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 LINC00588Q9Y4M8 146 aa5.11□□□□□ -1.59
CIITA-214ENST00000636238 TRAV4A0A0B4J268 109 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 TCAPO15273 167 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 AMTP48728 403 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 Q5VSD8 79 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 Q8N8P6 123 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 TMEM18Q96B42 140 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 CHCHD1Q96BP2 118 aaKnown RBP5.1□□□□□ -1.59
CIITA-214ENST00000636238 C18orf15Q96N68 181 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 ST20Q9HBF5 79 aa5.1□□□□□ -1.59
CIITA-214ENST00000636238 IGHV1-24A0A0C4DH33 117 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 PRSS47A8MTI9 375 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 RHODO00212 210 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 NUDT3O95989 172 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 SUMO2P61956 95 aaKnown RBP5.09□□□□□ -1.59
CIITA-214ENST00000636238 ZFP2Q6ZN57 461 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 LINC00173Q6ZV60 143 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 PACRGQ96M98 296 aaPredicted RBP5.09□□□□□ -1.59
CIITA-214ENST00000636238 C20orf78Q9BR46 151 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 SMIM2Q9BVW6 85 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.59
CIITA-214ENST00000636238 NIT2Q9NQR4 276 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 AP5S1Q9NUS5 200 aa5.09□□□□□ -1.59
CIITA-214ENST00000636238 MRPS16Q9Y3D3 137 aaKnown RBP5.09□□□□□ -1.59
CIITA-214ENST00000636238 TRGV4A0A0C4DH28 118 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 SDHAF1A6NFY7 115 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 F5H768 121 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 FAM229AH3BQW9 127 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 H7C1H1 209 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 K7EP13 123 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 PPP1R17O96001 155 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 POLR2KP53803 58 aaKnown RBP5.08□□□□□ -1.6
CIITA-214ENST00000636238 XGP55808 180 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 FHL2Q14192 279 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 NFE4Q86UQ8 179 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 LINC00612Q8N6U2 182 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 NEXN-AS1Q8NBZ9 246 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 TMEM70Q9BUB7 260 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 TNFRSF18Q9Y5U5 241 aa5.08□□□□□ -1.6
CIITA-214ENST00000636238 A0A096LNJ9 63 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 IGHV3-38A0A0C4DH36 116 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 TRBV6-5A0A0K0K1A5 114 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 LOC100131303A0A0U1RQF7 123 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 GAGE12JA6NER3 117 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 LINC01546A6NGU7 62 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 J3QL48 77 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 K7EQD1 137 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 VCYO14598 125 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 KRTDAPP60985 99 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 GAGE1Q13065 139 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 GAGE4Q13068 117 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 GAGE5Q13069 117 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 LAGE3Q14657 143 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 GAGE13Q4V321 117 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 SLC25A29Q8N8R3 303 aa5.07□□□□□ -1.6
CIITA-214ENST00000636238 FLG2Q5D862 2391 aaPredicted RBP5.06□□□□□ -1.6
CIITA-214ENST00000636238 LEPROTL1O95214 131 aa5.06□□□□□ -1.6
CIITA-214ENST00000636238 TSHBP01222 138 aa5.06□□□□□ -1.6
CIITA-214ENST00000636238 FCER1GP30273 86 aa5.06□□□□□ -1.6
CIITA-214ENST00000636238 Q6ZRN7 208 aaPredicted RBP5.06□□□□□ -1.6
CIITA-214ENST00000636238 DNAJC30Q96LL9 226 aa5.06□□□□□ -1.6
CIITA-214ENST00000636238 KRTAP1-5Q9BYS1 174 aa5.06□□□□□ -1.6
CIITA-214ENST00000636238 TRBV27A0A0K0K1C4 114 aa5.05□□□□□ -1.6
CIITA-214ENST00000636238 KRTAP29-1A8MX34 341 aaPredicted RBP5.05□□□□□ -1.6
CIITA-214ENST00000636238 I3L3M4 83 aa5.05□□□□□ -1.6
CIITA-214ENST00000636238 HBDP02042 147 aa5.05□□□□□ -1.6
CIITA-214ENST00000636238 C3orf79P0CE67 100 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms