RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PRSS1P07477 247 aa11.65□□□□□ -0.54
PNKP-225ENST00000636214 CEBPGP53567 150 aa11.65□□□□□ -0.54
PNKP-225ENST00000636214 ALKAL2Q6UX46 152 aa11.65□□□□□ -0.54
PNKP-225ENST00000636214 CLRN3Q8NCR9 226 aa11.65□□□□□ -0.54
PNKP-225ENST00000636214 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
PNKP-225ENST00000636214 CNFNQ9BYD5 112 aa11.65□□□□□ -0.54
PNKP-225ENST00000636214 K7EN84 100 aa11.64□□□□□ -0.55
PNKP-225ENST00000636214 GATCO43716 136 aaKnown RBP11.64□□□□□ -0.55
PNKP-225ENST00000636214 Q6ZNX1 250 aa11.64□□□□□ -0.55
PNKP-225ENST00000636214 AP5S1Q9NUS5 200 aa11.64□□□□□ -0.55
PNKP-225ENST00000636214 hCG_2014768A0A024R1R8 64 aa11.63□□□□□ -0.55
PNKP-225ENST00000636214 C20orf203Q8NBC4 194 aa11.63□□□□□ -0.55
PNKP-225ENST00000636214 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
PNKP-225ENST00000636214 hDV102S1A0JD36 115 aa11.62□□□□□ -0.55
PNKP-225ENST00000636214 A8MWL6 223 aa11.62□□□□□ -0.55
PNKP-225ENST00000636214 TEX261Q6UWH6 196 aa11.62□□□□□ -0.55
PNKP-225ENST00000636214 IGLV4-60A0A075B6I1 120 aa11.61□□□□□ -0.55
PNKP-225ENST00000636214 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
PNKP-225ENST00000636214 AMMECR1LQ6DCA0 310 aa11.61□□□□□ -0.55
PNKP-225ENST00000636214 GATD1Q8NB37 220 aa11.61□□□□□ -0.55
PNKP-225ENST00000636214 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.6□□□□□ -0.55
PNKP-225ENST00000636214 C9orf163Q8N9P6 203 aa11.6□□□□□ -0.55
PNKP-225ENST00000636214 EIF5A2Q9GZV4 153 aaKnown RBP11.6□□□□□ -0.55
PNKP-225ENST00000636214 IGKV3OR2-268A0A0C4DH90 116 aa11.59□□□□□ -0.55
PNKP-225ENST00000636214 NCR2O95944 276 aa11.59□□□□□ -0.55
PNKP-225ENST00000636214 APCSP02743 223 aa11.59□□□□□ -0.55
PNKP-225ENST00000636214 KRTAP26-1Q6PEX3 210 aa11.59□□□□□ -0.55
PNKP-225ENST00000636214 FAM231DQ6ZW35 169 aa11.59□□□□□ -0.55
PNKP-225ENST00000636214 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
PNKP-225ENST00000636214 CFAP161Q6P656 301 aa11.58□□□□□ -0.56
PNKP-225ENST00000636214 GTSF1Q8WW33 167 aa11.58□□□□□ -0.56
PNKP-225ENST00000636214 SMIM7Q9BQ49 75 aa11.58□□□□□ -0.56
PNKP-225ENST00000636214 RPL37AP61513 92 aaKnown RBP11.57□□□□□ -0.56
PNKP-225ENST00000636214 CT83Q5H943 113 aa11.57□□□□□ -0.56
PNKP-225ENST00000636214 RPL39LQ96EH5 51 aaKnown RBP11.57□□□□□ -0.56
PNKP-225ENST00000636214 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
PNKP-225ENST00000636214 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
PNKP-225ENST00000636214 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
PNKP-225ENST00000636214 KRTAP29-1A8MX34 341 aaPredicted RBP11.56□□□□□ -0.56
PNKP-225ENST00000636214 CNBPP62633 177 aaKnown RBP11.56□□□□□ -0.56
PNKP-225ENST00000636214 DPH3Q96FX2 82 aa11.56□□□□□ -0.56
PNKP-225ENST00000636214 H7C423 109 aa11.55□□□□□ -0.56
PNKP-225ENST00000636214 PMCHP20382 165 aa11.55□□□□□ -0.56
PNKP-225ENST00000636214 LYPD6BQ8NI32 183 aa11.55□□□□□ -0.56
PNKP-225ENST00000636214 BTF3L4Q96K17 158 aa11.55□□□□□ -0.56
PNKP-225ENST00000636214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.54□□□□□ -0.56
PNKP-225ENST00000636214 IGKV2-29A2NJV5 120 aaPredicted RBP11.54□□□□□ -0.56
PNKP-225ENST00000636214 GAGE12HA6NDE8 117 aa11.54□□□□□ -0.56
PNKP-225ENST00000636214 FOXA3P55318 350 aaPredicted RBP11.54□□□□□ -0.56
PNKP-225ENST00000636214 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
PNKP-225ENST00000636214 A0A1B0GUT8 65 aa11.53□□□□□ -0.56
PNKP-225ENST00000636214 ZNF727A8MUV8 499 aa11.53□□□□□ -0.56
PNKP-225ENST00000636214 I3L3M4 83 aa11.53□□□□□ -0.56
PNKP-225ENST00000636214 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
PNKP-225ENST00000636214 ST20Q9HBF5 79 aa11.53□□□□□ -0.56
PNKP-225ENST00000636214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.53□□□□□ -0.56
PNKP-225ENST00000636214 HIGD1CA8MV81 97 aa11.52□□□□□ -0.57
PNKP-225ENST00000636214 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.57
PNKP-225ENST00000636214 FGF6P10767 208 aa11.52□□□□□ -0.57
PNKP-225ENST00000636214 ZNF25P17030 456 aaPredicted RBP11.52□□□□□ -0.57
PNKP-225ENST00000636214 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.57
PNKP-225ENST00000636214 FAM210AQ96ND0 272 aa11.52□□□□□ -0.57
PNKP-225ENST00000636214 LINC01551Q86U37 167 aa11.51□□□□□ -0.57
PNKP-225ENST00000636214 CHCHD10Q8WYQ3 142 aaPredicted RBP11.51□□□□□ -0.57
PNKP-225ENST00000636214 FAM231BA6NCW3 169 aa11.5□□□□□ -0.57
PNKP-225ENST00000636214 TMEM191AQ9H0A3 160 aa11.5□□□□□ -0.57
PNKP-225ENST00000636214 OSTCQ9NRP0 149 aa11.5□□□□□ -0.57
PNKP-225ENST00000636214 TRBV6-5A0A0K0K1A5 114 aa11.49□□□□□ -0.57
PNKP-225ENST00000636214 OXTP01178 125 aa11.49□□□□□ -0.57
PNKP-225ENST00000636214 KRTAP10-4P60372 401 aaPredicted RBP11.49□□□□□ -0.57
PNKP-225ENST00000636214 OR5A1Q8NGJ0 315 aa11.49□□□□□ -0.57
PNKP-225ENST00000636214 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
PNKP-225ENST00000636214 RPS10P46783 165 aaKnown RBP11.48□□□□□ -0.57
PNKP-225ENST00000636214 RIGQ13278 110 aa11.48□□□□□ -0.57
PNKP-225ENST00000636214 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
PNKP-225ENST00000636214 RNF185Q96GF1 192 aa11.48□□□□□ -0.57
PNKP-225ENST00000636214 TMEM242Q9NWH2 141 aa11.48□□□□□ -0.57
PNKP-225ENST00000636214 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
PNKP-225ENST00000636214 C15orf56Q8N910 161 aa11.47□□□□□ -0.57
PNKP-225ENST00000636214 PANO1I0J062 215 aa11.46□□□□□ -0.57
PNKP-225ENST00000636214 PPP1R17O96001 155 aa11.46□□□□□ -0.57
PNKP-225ENST00000636214 C7orf77A4D0Y5 90 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 TSHBP01222 138 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 FCER1GP30273 86 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 XCL1P47992 114 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 SMAGPQ0VAQ4 97 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 CIRBPQ14011 172 aaKnown RBP11.45□□□□□ -0.58
PNKP-225ENST00000636214 SS18Q15532 418 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 TMEM241Q24JQ0 296 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 FAM74A3Q4VXF1 159 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 AMN1Q8IY45 258 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
PNKP-225ENST00000636214 SLPIP03973 132 aa11.44□□□□□ -0.58
PNKP-225ENST00000636214 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
PNKP-225ENST00000636214 RAB4AP20338 218 aa11.44□□□□□ -0.58
PNKP-225ENST00000636214 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
PNKP-225ENST00000636214 NAT8BQ9UHF3 227 aa11.44□□□□□ -0.58
PNKP-225ENST00000636214 A0A087WYN8 130 aa11.43□□□□□ -0.58
PNKP-225ENST00000636214 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
PNKP-225ENST00000636214 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms