RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LINC00311Q8N616 119 aa4.69□□□□□ -1.66
SCN1A-212ENST00000636194 COL5A1P20908 1838 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-212ENST00000636194 LINC00473A8K010 186 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 BLCAPP62952 87 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 C1orf158Q8N1D5 194 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 NDUFS6O75380 124 aaKnown RBP4.68□□□□□ -1.66
SCN1A-212ENST00000636194 MRPS36P82909 103 aaKnown RBP4.68□□□□□ -1.66
SCN1A-212ENST00000636194 Q6ZS92 163 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 ZNF837Q96EG3 531 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-212ENST00000636194 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 SPINK1P00995 79 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 FAM120AOSQ5T036 256 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 Q6ZQY7 126 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 A6NDX4 124 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 MYCNOSP40205 109 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 WDR86Q86TI4 376 aa4.68□□□□□ -1.66
SCN1A-212ENST00000636194 P0DMU3 169 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 FAM231AP0DMU4 169 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 FAM231CP0DMU5 169 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 Q5BKY6 102 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 SDIM1Q6ZPB5 146 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 NDUFV3P56181 108 aaKnown RBP4.67□□□□□ -1.66
SCN1A-212ENST00000636194 IGF2-ASQ6U949 168 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 C3orf84H3BNL1 204 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 PRLHP81277 87 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 ENHOQ6UWT2 76 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 LYPD2Q6UXB3 125 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 MIR7-3HGQ8N6C7 128 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 KAAG1Q9UBP8 84 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 USP9YO00507 2555 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-212ENST00000636194 POLR3KQ9Y2Y1 108 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-212ENST00000636194 A0A0G2JRQ6 117 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 IGHV2-5P01817 119 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
SCN1A-212ENST00000636194 Q6P435 159 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 LINC00114Q6XXX2 140 aa4.67□□□□□ -1.66
SCN1A-212ENST00000636194 COLCA2A8K830 154 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 CCKP06307 115 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 ESRGQ1W209 222 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 DAND5Q8N907 189 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 MIAQ16674 131 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 SIRPDQ9H106 197 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 TNS1Q9HBL0 1735 aaKnown RBP4.66□□□□□ -1.66
SCN1A-212ENST00000636194 QRFPP83859 136 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 DEFB136Q30KP8 78 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 TDRG1Q3Y452 100 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 WFDC1Q9HC57 220 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 ESM1Q9NQ30 184 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 MT-ATP8P03928 68 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 SLURP1P55000 103 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 CIRBP-AS1Q8TBR5 109 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 CDPF1Q6NVV7 123 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 XAGE1AQ9HD64 81 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 TMEM89A2RUT3 159 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 NUPR2A6NF83 97 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 C11orf86A6NJI1 115 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 REG3AQ06141 175 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 SCXQ7RTU7 201 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 SNURFQ9Y675 71 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 LY6HO94772 140 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 DCANP1Q8TF63 244 aa4.66□□□□□ -1.66
SCN1A-212ENST00000636194 GNRH2O43555 120 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 IGFBP6P24592 240 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-212ENST00000636194 FAM19A5Q7Z5A7 132 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-212ENST00000636194 NDUFA11Q86Y39 141 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 PRSS33Q8NF86 280 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 IGKV1D-43A0A0B4J1Z2 117 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 A0A1B0GXF2 115 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 TMEM105Q8N8V8 129 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 DEFB131BA0A096LNP1 70 aa4.65□□□□□ -1.66
SCN1A-212ENST00000636194 SRSF3P84103 164 aaKnown RBP4.65□□□□□ -1.66
SCN1A-212ENST00000636194 CFAP126Q5VTH2 177 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 CLEC2BQ92478 149 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 RBX1P62877 108 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-212ENST00000636194 CD59P13987 128 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 HIGD1BQ9P298 99 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 COX17Q14061 63 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 IGFL3Q6UXB1 125 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 TOMM6Q96B49 74 aa4.65□□□□□ -1.67
SCN1A-212ENST00000636194 MIFP14174 115 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 FHL2Q14192 279 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 MUC7Q8TAX7 377 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 FAM30AQ9NZY2 134 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 TRAV26-1A0A087WT03 109 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 C2orf70A6NJV1 201 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 K7EMT4 169 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 LIMD2Q9BT23 127 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 ZNF843Q8N446 348 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 Q8N976 141 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 LOC105371267A0A1B0GV96 52 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 Q6Q795 121 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 FXYD5Q96DB9 178 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 NRACQ8N912 160 aa4.64□□□□□ -1.67
SCN1A-212ENST00000636194 LY6LH3BQJ8 138 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms