RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 VCYO14598 125 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 CRYGDP07320 174 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 CKS1BP61024 79 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 SBSPONQ8IVN8 264 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 LGALS9O00182 355 aa11.4□□□□□ -0.58
CLN8-209ENST00000635970 PRB2P02812 416 aaPredicted RBP11.4□□□□□ -0.58
CLN8-209ENST00000635970 PSMB2P49721 201 aa11.4□□□□□ -0.58
CLN8-209ENST00000635970 KRTAP10-11P60412 298 aa11.4□□□□□ -0.58
CLN8-209ENST00000635970 KIR2DL4Q99706 377 aa11.4□□□□□ -0.58
CLN8-209ENST00000635970 PEMTQ9UBM1 199 aa11.4□□□□□ -0.58
CLN8-209ENST00000635970 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 LOC107984156A0A0G2JMH3 177 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 M0QXV9 152 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 RNASE3P12724 160 aaKnown RBP11.39□□□□□ -0.59
CLN8-209ENST00000635970 SMCPP49901 116 aaPredicted RBP11.39□□□□□ -0.59
CLN8-209ENST00000635970 POLR2KP53803 58 aaKnown RBP11.39□□□□□ -0.59
CLN8-209ENST00000635970 TEN1Q86WV5 123 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 ARL17AQ8IVW1 177 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 SLC25A29Q8N8R3 303 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 WIPF1O43516 503 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 INSL3P51460 131 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 CRYBA4P53673 196 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 KPRPQ5T749 579 aaPredicted RBP11.39□□□□□ -0.59
CLN8-209ENST00000635970 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 KIF25-AS1Q9Y6Z4 181 aa11.39□□□□□ -0.59
CLN8-209ENST00000635970 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
CLN8-209ENST00000635970 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
CLN8-209ENST00000635970 TRBV6-5A0A0K0K1A5 114 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
CLN8-209ENST00000635970 RNASE4P34096 147 aaKnown RBP11.37□□□□□ -0.59
CLN8-209ENST00000635970 LINC00315P59091 139 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 EGFEM1PQ0D2K5 195 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 CDIP1Q9H305 208 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 IGHV3-30P01768 117 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 IGHV3-30-5P0DP03 117 aa11.37□□□□□ -0.59
CLN8-209ENST00000635970 A8MWV9 139 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 TSHBP01222 138 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 IGLV1-51P01701 117 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 DAZ1Q9NQZ3 744 aaKnown RBP11.36□□□□□ -0.59
CLN8-209ENST00000635970 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 GNRH2O43555 120 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 NFE4Q86UQ8 179 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
CLN8-209ENST00000635970 KLLNB2CW77 178 aa11.35□□□□□ -0.59
CLN8-209ENST00000635970 J3KRW8 73 aa11.35□□□□□ -0.59
CLN8-209ENST00000635970 SPINK8P0C7L1 97 aa11.35□□□□□ -0.59
CLN8-209ENST00000635970 CFC1BP0CG36 223 aa11.35□□□□□ -0.59
CLN8-209ENST00000635970 CFC1P0CG37 223 aa11.35□□□□□ -0.59
CLN8-209ENST00000635970 FAM159AQ6UWV7 190 aa11.35□□□□□ -0.59
CLN8-209ENST00000635970 DYNLRB2Q8TF09 96 aa11.35□□□□□ -0.59
CLN8-209ENST00000635970 TCL1BO95988 128 aa11.33□□□□□ -0.6
CLN8-209ENST00000635970 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
CLN8-209ENST00000635970 ID1P41134 155 aa11.33□□□□□ -0.6
CLN8-209ENST00000635970 RHOHQ15669 191 aa11.33□□□□□ -0.6
CLN8-209ENST00000635970 SUMO4Q6EEV6 95 aa11.33□□□□□ -0.6
CLN8-209ENST00000635970 Q6ZUT4 128 aa11.33□□□□□ -0.6
CLN8-209ENST00000635970 SORL1Q92673 2214 aa11.33□□□□□ -0.6
CLN8-209ENST00000635970 J3QQQ9 107 aa11.32□□□□□ -0.6
CLN8-209ENST00000635970 K7EMT4 169 aa11.32□□□□□ -0.6
CLN8-209ENST00000635970 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
CLN8-209ENST00000635970 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
CLN8-209ENST00000635970 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
CLN8-209ENST00000635970 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
CLN8-209ENST00000635970 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
CLN8-209ENST00000635970 PRKDCP78527 4128 aaKnown RBP11.32□□□□□ -0.6
CLN8-209ENST00000635970 SDHAF1A6NFY7 115 aa11.32□□□□□ -0.6
CLN8-209ENST00000635970 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
CLN8-209ENST00000635970 A0A0B4J2C4 111 aa11.31□□□□□ -0.6
CLN8-209ENST00000635970 LEPROTO15243 131 aa11.31□□□□□ -0.6
CLN8-209ENST00000635970 SCGB1C2P0DMR2 95 aa11.31□□□□□ -0.6
CLN8-209ENST00000635970 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
CLN8-209ENST00000635970 TMEM61Q8N0U2 210 aa11.31□□□□□ -0.6
CLN8-209ENST00000635970 CARD19Q96LW7 228 aa11.31□□□□□ -0.6
CLN8-209ENST00000635970 AMELXQ99217 191 aa11.31□□□□□ -0.6
CLN8-209ENST00000635970 A0A0J9YX75 114 aa11.3□□□□□ -0.6
CLN8-209ENST00000635970 P0DMU3 169 aa11.3□□□□□ -0.6
CLN8-209ENST00000635970 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
CLN8-209ENST00000635970 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
CLN8-209ENST00000635970 LINC01600Q96MT4 127 aa11.3□□□□□ -0.6
CLN8-209ENST00000635970 RHPN1-AS1Q9BWJ2 59 aa11.3□□□□□ -0.6
CLN8-209ENST00000635970 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
CLN8-209ENST00000635970 ZNRF2Q8NHG8 242 aa11.3□□□□□ -0.6
CLN8-209ENST00000635970 SPRY2O43597 315 aa11.29□□□□□ -0.6
CLN8-209ENST00000635970 F5H697 171 aa11.28□□□□□ -0.6
CLN8-209ENST00000635970 K7EIL1 84 aa11.28□□□□□ -0.6
CLN8-209ENST00000635970 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
CLN8-209ENST00000635970 TMEM223A0PJW6 202 aa11.28□□□□□ -0.6
CLN8-209ENST00000635970 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
CLN8-209ENST00000635970 RPL39P62891 51 aaKnown RBP11.28□□□□□ -0.6
CLN8-209ENST00000635970 TRPT1Q86TN4 253 aaKnown RBP11.28□□□□□ -0.6
CLN8-209ENST00000635970 C9orf85Q96MD7 179 aa11.28□□□□□ -0.6
CLN8-209ENST00000635970 IGKV3-7A0A075B6H7 116 aa11.27□□□□□ -0.61
CLN8-209ENST00000635970 F6UB75 175 aa11.27□□□□□ -0.61
CLN8-209ENST00000635970 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
CLN8-209ENST00000635970 XGP55808 180 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms