RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 TIMM17AQ99595 171 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 MAST4O15021 2626 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 GAGE7O76087 117 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 C16orf74Q96GX8 76 aa12.86□□□□□ -0.35
CLN5-206ENST00000635915 CST9LQ9H4G1 147 aa12.85□□□□□ -0.35
CLN5-206ENST00000635915 CYSRT1A8MQ03 144 aa12.85□□□□□ -0.35
CLN5-206ENST00000635915 DAZ2Q13117 558 aaKnown RBP12.85□□□□□ -0.35
CLN5-206ENST00000635915 TMEM141Q96I45 108 aa12.85□□□□□ -0.35
CLN5-206ENST00000635915 PMVKQ15126 192 aa12.84□□□□□ -0.35
CLN5-206ENST00000635915 CEMP1Q6PRD7 247 aaPredicted RBP12.84□□□□□ -0.35
CLN5-206ENST00000635915 IGLV4-69A0A075B6H9 119 aa12.84□□□□□ -0.35
CLN5-206ENST00000635915 TRAV8-6A0A0B4J262 113 aa12.83□□□□□ -0.36
CLN5-206ENST00000635915 BVES-AS1Q5T3Y7 98 aa12.83□□□□□ -0.36
CLN5-206ENST00000635915 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
CLN5-206ENST00000635915 LINC01549A6NIU2 74 aa12.83□□□□□ -0.36
CLN5-206ENST00000635915 C11orf86A6NJI1 115 aa12.83□□□□□ -0.36
CLN5-206ENST00000635915 ZNRF2Q8NHG8 242 aa12.83□□□□□ -0.36
CLN5-206ENST00000635915 TRAV4A0A0B4J268 109 aa12.82□□□□□ -0.36
CLN5-206ENST00000635915 MAPKAPK5-AS1Q8N8E1 139 aa12.82□□□□□ -0.36
CLN5-206ENST00000635915 SLC25A29Q8N8R3 303 aa12.81□□□□□ -0.36
CLN5-206ENST00000635915 CHCHD7Q9BUK0 85 aa12.81□□□□□ -0.36
CLN5-206ENST00000635915 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.81□□□□□ -0.36
CLN5-206ENST00000635915 IGKV2-29A2NJV5 120 aaPredicted RBP12.81□□□□□ -0.36
CLN5-206ENST00000635915 RNASE13Q5GAN3 156 aaKnown RBP12.81□□□□□ -0.36
CLN5-206ENST00000635915 IGLV4-3A0A075B6K6 122 aa12.8□□□□□ -0.36
CLN5-206ENST00000635915 KRTAP24-1Q3LI83 254 aa12.8□□□□□ -0.36
CLN5-206ENST00000635915 COX11Q9Y6N1 276 aa12.8□□□□□ -0.36
CLN5-206ENST00000635915 K7EQD1 137 aa12.8□□□□□ -0.36
CLN5-206ENST00000635915 GAGE1Q13065 139 aa12.8□□□□□ -0.36
CLN5-206ENST00000635915 FAM104AQ969W3 186 aa12.8□□□□□ -0.36
CLN5-206ENST00000635915 DNAJC30Q96LL9 226 aa12.8□□□□□ -0.36
CLN5-206ENST00000635915 C12orf54Q6X4T0 127 aa12.79□□□□□ -0.36
CLN5-206ENST00000635915 OVOL2Q9BRP0 275 aa12.79□□□□□ -0.36
CLN5-206ENST00000635915 TRBV7-3A0A075B6L6 115 aa12.78□□□□□ -0.36
CLN5-206ENST00000635915 COTL1Q14019 142 aa12.78□□□□□ -0.36
CLN5-206ENST00000635915 TRBV25-1A0A075B6N4 114 aa12.78□□□□□ -0.36
CLN5-206ENST00000635915 TMEM97Q5BJF2 176 aa12.78□□□□□ -0.36
CLN5-206ENST00000635915 LOC100131303A0A0U1RQF7 123 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 GAGE12JA6NER3 117 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 GAGE4Q13068 117 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 GAGE5Q13069 117 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 GAGE13Q4V321 117 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 WFDC9Q8NEX5 89 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 COL6A5A8TX70 2615 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 X6R8D5 127 aa12.77□□□□□ -0.37
CLN5-206ENST00000635915 DEFB130BP0DP73 79 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 DEFB130AP0DP74 79 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 TMEM170BQ5T4T1 132 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 ORAOV1Q8WV07 137 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 VCX2Q9H322 139 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 TAX1BP3O14907 124 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 SIVA1O15304 175 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 RPL36AP83881 106 aaKnown RBP12.76□□□□□ -0.37
CLN5-206ENST00000635915 DEFB135Q30KP9 77 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
CLN5-206ENST00000635915 RPL36ALQ969Q0 106 aaKnown RBP12.76□□□□□ -0.37
CLN5-206ENST00000635915 CCL25O15444 150 aa12.75□□□□□ -0.37
CLN5-206ENST00000635915 A0A0J9YXV3 536 aa12.75□□□□□ -0.37
CLN5-206ENST00000635915 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
CLN5-206ENST00000635915 UBE2D4Q9Y2X8 147 aa12.75□□□□□ -0.37
CLN5-206ENST00000635915 E9PLD3 99 aa12.74□□□□□ -0.37
CLN5-206ENST00000635915 PTTG1IPP53801 180 aa12.74□□□□□ -0.37
CLN5-206ENST00000635915 PYGO1Q9Y3Y4 419 aa12.74□□□□□ -0.37
CLN5-206ENST00000635915 TRGV4A0A0C4DH28 118 aa12.73□□□□□ -0.37
CLN5-206ENST00000635915 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
CLN5-206ENST00000635915 DEFB4AO15263 64 aa12.73□□□□□ -0.37
CLN5-206ENST00000635915 NTM-AS1Q6ZSK4 140 aa12.73□□□□□ -0.37
CLN5-206ENST00000635915 UBE2D3P61077 147 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 UBE2D2P62837 147 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 HSD52Q0P140 79 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 VAMP3Q15836 100 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 PAPPA-AS1Q5QFB9 102 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 K7EP13 123 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 Q6ZUT4 128 aa12.72□□□□□ -0.37
CLN5-206ENST00000635915 LINC00694P0DN24 101 aa12.71□□□□□ -0.37
CLN5-206ENST00000635915 FHL2Q14192 279 aa12.71□□□□□ -0.37
CLN5-206ENST00000635915 AMELXQ99217 191 aa12.71□□□□□ -0.37
CLN5-206ENST00000635915 NFE4Q86UQ8 179 aa12.71□□□□□ -0.37
CLN5-206ENST00000635915 MYMXA0A1B0GTQ4 84 aa12.7□□□□□ -0.38
CLN5-206ENST00000635915 TSPEAR-AS2P59090 65 aa12.7□□□□□ -0.38
CLN5-206ENST00000635915 SPANXA1Q9NS26 97 aa12.7□□□□□ -0.38
CLN5-206ENST00000635915 HIGD1BQ9P298 99 aa12.7□□□□□ -0.38
CLN5-206ENST00000635915 IGHV3-64A0A075B6Q5 118 aa12.69□□□□□ -0.38
CLN5-206ENST00000635915 UBE2V1Q13404 147 aa12.69□□□□□ -0.38
CLN5-206ENST00000635915 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
CLN5-206ENST00000635915 GCSHP23434 173 aa12.69□□□□□ -0.38
CLN5-206ENST00000635915 DAZ4Q86SG3 579 aaKnown RBP12.69□□□□□ -0.38
CLN5-206ENST00000635915 DAZ3Q9NR90 486 aaKnown RBP12.69□□□□□ -0.38
CLN5-206ENST00000635915 TRBV6-4A0A1B0GX49 114 aa12.68□□□□□ -0.38
CLN5-206ENST00000635915 ZNF815PA8K554 130 aa12.68□□□□□ -0.38
CLN5-206ENST00000635915 PRIMA1Q86XR5 153 aa12.68□□□□□ -0.38
CLN5-206ENST00000635915 WIPF1O43516 503 aa12.68□□□□□ -0.38
CLN5-206ENST00000635915 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
CLN5-206ENST00000635915 HERVK_113P61574 105 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms