RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 GAGE6Q13070 117 aa5.77□□□□□ -1.49
CDKL5-209ENST00000635828 APCSP02743 223 aa5.77□□□□□ -1.49
CDKL5-209ENST00000635828 PRELID3AQ96N28 172 aa5.77□□□□□ -1.49
CDKL5-209ENST00000635828 MRPS16Q9Y3D3 137 aaKnown RBP5.77□□□□□ -1.49
CDKL5-209ENST00000635828 TRBV24-1A0A075B6N3 115 aa5.77□□□□□ -1.49
CDKL5-209ENST00000635828 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
CDKL5-209ENST00000635828 IGLV4-60A0A075B6I1 120 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 IFI27P40305 119 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-209ENST00000635828 RPL39P62891 51 aaKnown RBP5.76□□□□□ -1.49
CDKL5-209ENST00000635828 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
CDKL5-209ENST00000635828 MRAP2Q96G30 205 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 CHCHD7Q9BUK0 85 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 SIVA1O15304 175 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 TRGC2P03986 189 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 ORMDL3Q8N138 153 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 GNB1LQ9BYB4 327 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 ST20Q9HBF5 79 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 SMCO4Q9NRQ5 59 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 TRAPPC1Q9Y5R8 145 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 TMEM262E9PQX1 116 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 TCTAP57738 103 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 LELP1Q5T871 98 aa5.76□□□□□ -1.49
CDKL5-209ENST00000635828 OPRPNQ99935 248 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-209ENST00000635828 A0A1B0GW15 77 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 H7C1H1 209 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 URB1-AS1Q96HZ7 61 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 CHCHD5Q9BSY4 110 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 ALKBH7Q9BT30 221 aaPredicted RBP5.75□□□□□ -1.49
CDKL5-209ENST00000635828 PMCHL1Q16048 86 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 NIT1Q86X76 327 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 TRBV6-5A0A0K0K1A5 114 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 PHOX2AO14813 284 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 PMCHP20382 165 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 UPK3BQ9BT76 320 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 Q9HAA7 133 aa5.75□□□□□ -1.49
CDKL5-209ENST00000635828 TRBV27A0A0K0K1C4 114 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 NBDYA0A0U1RRE5 68 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 ZC2HC1BQ5TFG8 222 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 Q6ZR54 194 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 FAM104AQ969W3 186 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 KLK12Q9UKR0 248 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 I3L3M4 83 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 SMIM2Q9BVW6 85 aa5.74□□□□□ -1.49
CDKL5-209ENST00000635828 HLA-DQA1P01909 254 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 AMTP48728 403 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 TRAV9-1A0A075B6T8 112 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 COTL1Q14019 142 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 ANKRD39Q53RE8 183 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 RTL8CO15255 209 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 S100A8P05109 93 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 DNAH10OSP0CZ25 163 aa5.73□□□□□ -1.49
CDKL5-209ENST00000635828 IGLV10-54A0A075B6I4 117 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 TRBV25-1A0A075B6N4 114 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 RAB5AP20339 215 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 RBX1P62877 108 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 C20orf203Q8NBC4 194 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 G0S2P27469 103 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 LINC00269Q8N2A0 174 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 MAPKAPK5-AS1Q8N8E1 139 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 C18orf32Q8TCD1 76 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 IGHV1-24A0A0C4DH33 117 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 NUPR1O60356 82 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 ESDP10768 282 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 ENHOQ6UWT2 76 aa5.72□□□□□ -1.49
CDKL5-209ENST00000635828 TRAV8-6A0A0B4J262 113 aa5.71□□□□□ -1.49
CDKL5-209ENST00000635828 ANGP03950 147 aaKnown RBP5.71□□□□□ -1.49
CDKL5-209ENST00000635828 VCYO14598 125 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 LINC00310P59036 64 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 LINC01556Q5JQF7 62 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 TMEM243Q9BU79 118 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 A0A087WX48 190 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 LECT2O14960 151 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 FCER1GP30273 86 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 WFDC2Q14508 124 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
CDKL5-209ENST00000635828 SH2D6Q7Z4S9 175 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 C20orf78Q9BR46 151 aa5.71□□□□□ -1.5
CDKL5-209ENST00000635828 PPBPP02775 128 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 FGF6P10767 208 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 UBE2WQ96B02 151 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 MAP1LC3AQ9H492 121 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 DYNC1H1Q14204 4646 aaKnown RBP5.7□□□□□ -1.5
CDKL5-209ENST00000635828 A0A096LNJ9 63 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 TIRAPP58753 221 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
CDKL5-209ENST00000635828 TNP2Q05952 138 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 MAJINQ3KP22 176 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 KIR2DL4Q99706 377 aa5.7□□□□□ -1.5
CDKL5-209ENST00000635828 UBE2D4Q9Y2X8 147 aa5.69□□□□□ -1.5
CDKL5-209ENST00000635828 Q6ZUT4 128 aa5.69□□□□□ -1.5
CDKL5-209ENST00000635828 MT-ND6P03923 174 aa5.69□□□□□ -1.5
CDKL5-209ENST00000635828 Q8N8P6 123 aa5.69□□□□□ -1.5
CDKL5-209ENST00000635828 PRSS3P2Q8NHM4 247 aa5.69□□□□□ -1.5
CDKL5-209ENST00000635828 UBE2L6O14933 153 aa5.68□□□□□ -1.5
CDKL5-209ENST00000635828 CTAG1AP78358 180 aa5.68□□□□□ -1.5
CDKL5-209ENST00000635828 FAM19A2Q8N3H0 131 aa5.68□□□□□ -1.5
CDKL5-209ENST00000635828 IBA57-AS1B1ANH7 110 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms