RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 SULT1A2P50226 295 aa8.01□□□□□ -1.13
LINC00339-206ENST00000634451 NDUFS6O75380 124 aaKnown RBP8□□□□□ -1.13
LINC00339-206ENST00000634451 RPL35P42766 123 aaKnown RBP8□□□□□ -1.13
LINC00339-206ENST00000634451 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
LINC00339-206ENST00000634451 CCL20P78556 96 aa8□□□□□ -1.13
LINC00339-206ENST00000634451 TMUB2Q71RG4 321 aa8□□□□□ -1.13
LINC00339-206ENST00000634451 FER1L6-AS1Q8NA97 138 aa8□□□□□ -1.13
LINC00339-206ENST00000634451 TRAV26-2A0A0B4J265 109 aa7.99□□□□□ -1.13
LINC00339-206ENST00000634451 AMTP48728 403 aa7.99□□□□□ -1.13
LINC00339-206ENST00000634451 RASL11AQ6T310 242 aa7.99□□□□□ -1.13
LINC00339-206ENST00000634451 OR2D3Q8NGH3 330 aa7.99□□□□□ -1.13
LINC00339-206ENST00000634451 MBD3L1Q8WWY6 194 aa7.99□□□□□ -1.13
LINC00339-206ENST00000634451 CHCHD10Q8WYQ3 142 aaPredicted RBP7.99□□□□□ -1.13
LINC00339-206ENST00000634451 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-206ENST00000634451 IGKV2-29A2NJV5 120 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-206ENST00000634451 RAB19A4D1S5 217 aa7.98□□□□□ -1.13
LINC00339-206ENST00000634451 S100A9P06702 114 aaKnown RBP7.98□□□□□ -1.13
LINC00339-206ENST00000634451 CENPWQ5EE01 88 aa7.98□□□□□ -1.13
LINC00339-206ENST00000634451 Q6ZNX1 250 aa7.98□□□□□ -1.13
LINC00339-206ENST00000634451 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
LINC00339-206ENST00000634451 C19orf71A6NCJ1 209 aa7.97□□□□□ -1.13
LINC00339-206ENST00000634451 UBE2L6O14933 153 aa7.97□□□□□ -1.13
LINC00339-206ENST00000634451 PFDN1O60925 122 aa7.97□□□□□ -1.13
LINC00339-206ENST00000634451 LYZL1Q6UWQ5 148 aa7.97□□□□□ -1.13
LINC00339-206ENST00000634451 KCNRGQ8N5I3 272 aa7.97□□□□□ -1.13
LINC00339-206ENST00000634451 RPL39LQ96EH5 51 aaKnown RBP7.97□□□□□ -1.13
LINC00339-206ENST00000634451 PGLYRP4Q96LB8 373 aa7.97□□□□□ -1.13
LINC00339-206ENST00000634451 H7C1H1 209 aa7.96□□□□□ -1.14
LINC00339-206ENST00000634451 FOXA3P55318 350 aaPredicted RBP7.96□□□□□ -1.14
LINC00339-206ENST00000634451 FOXI1Q12951 378 aa7.96□□□□□ -1.14
LINC00339-206ENST00000634451 SRSF9Q13242 221 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00339-206ENST00000634451 COTL1Q14019 142 aa7.96□□□□□ -1.14
LINC00339-206ENST00000634451 NIT2Q9NQR4 276 aa7.96□□□□□ -1.14
LINC00339-206ENST00000634451 TRBV20OR9-2A0A075B6H5 130 aa7.95□□□□□ -1.14
LINC00339-206ENST00000634451 NTF3P20783 257 aa7.95□□□□□ -1.14
LINC00339-206ENST00000634451 GATD1Q8NB37 220 aa7.95□□□□□ -1.14
LINC00339-206ENST00000634451 C11orf52Q96A22 123 aa7.95□□□□□ -1.14
LINC00339-206ENST00000634451 XCL1P47992 114 aa7.94□□□□□ -1.14
LINC00339-206ENST00000634451 CACNG7P62955 275 aa7.94□□□□□ -1.14
LINC00339-206ENST00000634451 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
LINC00339-206ENST00000634451 GNG13Q9P2W3 67 aa7.94□□□□□ -1.14
LINC00339-206ENST00000634451 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
LINC00339-206ENST00000634451 RNASEKQ6P5S7 137 aaKnown RBP7.93□□□□□ -1.14
LINC00339-206ENST00000634451 CFAP161Q6P656 301 aa7.93□□□□□ -1.14
LINC00339-206ENST00000634451 FGF6P10767 208 aa7.92□□□□□ -1.14
LINC00339-206ENST00000634451 AMMECR1LQ6DCA0 310 aa7.92□□□□□ -1.14
LINC00339-206ENST00000634451 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
LINC00339-206ENST00000634451 IFNA1P01562 189 aa7.91□□□□□ -1.14
LINC00339-206ENST00000634451 TRGC1P0CF51 173 aa7.91□□□□□ -1.14
LINC00339-206ENST00000634451 CTRLP40313 264 aa7.91□□□□□ -1.14
LINC00339-206ENST00000634451 RPS20P60866 119 aaKnown RBP7.91□□□□□ -1.14
LINC00339-206ENST00000634451 REG3GQ6UW15 175 aa7.91□□□□□ -1.14
LINC00339-206ENST00000634451 FAM231BA6NCW3 169 aa7.9□□□□□ -1.14
LINC00339-206ENST00000634451 UMAD1C9J7I0 102 aa7.9□□□□□ -1.14
LINC00339-206ENST00000634451 CCL25O15444 150 aa7.9□□□□□ -1.14
LINC00339-206ENST00000634451 TWIST1Q15672 202 aa7.9□□□□□ -1.14
LINC00339-206ENST00000634451 CARD19Q96LW7 228 aa7.9□□□□□ -1.14
LINC00339-206ENST00000634451 BCL2L11O43521 198 aa7.89□□□□□ -1.15
LINC00339-206ENST00000634451 GNG4P50150 75 aa7.89□□□□□ -1.15
LINC00339-206ENST00000634451 Q6ZRP5 223 aa7.89□□□□□ -1.15
LINC00339-206ENST00000634451 NUDT10Q8NFP7 164 aa7.89□□□□□ -1.15
LINC00339-206ENST00000634451 NUDT11Q96G61 164 aa7.89□□□□□ -1.15
LINC00339-206ENST00000634451 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 F2Z2F3 143 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 APCSP02743 223 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 BCL2P10415 239 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 PTTG1IPP53801 180 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 GAGE2BQ13066 116 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 ZNF345Q14585 488 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 C9orf62Q8N4C0 152 aa7.88□□□□□ -1.15
LINC00339-206ENST00000634451 RNASE7Q9H1E1 156 aaKnown RBP7.88□□□□□ -1.15
LINC00339-206ENST00000634451 SDHAF1A6NFY7 115 aa7.87□□□□□ -1.15
LINC00339-206ENST00000634451 K7EN84 100 aa7.87□□□□□ -1.15
LINC00339-206ENST00000634451 OR5A1Q8NGJ0 315 aa7.87□□□□□ -1.15
LINC00339-206ENST00000634451 CNFNQ9BYD5 112 aa7.87□□□□□ -1.15
LINC00339-206ENST00000634451 MANBALQ9NQG1 85 aa7.87□□□□□ -1.15
LINC00339-206ENST00000634451 TMEM242Q9NWH2 141 aa7.87□□□□□ -1.15
LINC00339-206ENST00000634451 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 TSHBP01222 138 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 MED9Q9NWA0 146 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 MUC2Q02817 5179 aa7.86□□□□□ -1.15
LINC00339-206ENST00000634451 IGLV4-69A0A075B6H9 119 aa7.85□□□□□ -1.15
LINC00339-206ENST00000634451 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
LINC00339-206ENST00000634451 PHF5AQ7RTV0 110 aaKnown RBP7.85□□□□□ -1.15
LINC00339-206ENST00000634451 RPP21Q9H633 154 aaKnown RBP7.85□□□□□ -1.15
LINC00339-206ENST00000634451 TRAV1-1A0A0B4J248 108 aa7.84□□□□□ -1.15
LINC00339-206ENST00000634451 KANTRA0A1W2PQU2 76 aa7.84□□□□□ -1.15
LINC00339-206ENST00000634451 XKRY2A2RUG3 117 aa7.84□□□□□ -1.15
LINC00339-206ENST00000634451 NCR2O95944 276 aa7.84□□□□□ -1.15
LINC00339-206ENST00000634451 ESDP10768 282 aa7.84□□□□□ -1.15
LINC00339-206ENST00000634451 CAMPP49913 170 aa7.84□□□□□ -1.15
LINC00339-206ENST00000634451 MEF2BQ02080 365 aaPredicted RBP7.84□□□□□ -1.15
LINC00339-206ENST00000634451 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
LINC00339-206ENST00000634451 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
LINC00339-206ENST00000634451 OCC1Q8TAD7 63 aa7.83□□□□□ -1.16
LINC00339-206ENST00000634451 HMSDA8MTL9 139 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms