RNA–Protein interactions for RNA: ENST00000633671.1

LINC01002-231, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 830 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-231	ENST00000633671	COA6	Q5JTJ3	125 aa	Known RBP	9.14	□□□□□ -0.95
LINC01002-231	ENST00000633671	FAM74A4	Q5TZK3	123 aa		9.14	□□□□□ -0.95
LINC01002-231	ENST00000633671		Q6ZTI0	123 aa		9.14	□□□□□ -0.95
LINC01002-231	ENST00000633671	NIT2	Q9NQR4	276 aa		9.14	□□□□□ -0.95
LINC01002-231	ENST00000633671		A0A0J9YY99	117 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	TRBV6-5	A0A0K0K1A5	114 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	PMCH	P20382	165 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	LINC00315	P59091	139 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	KIAA1644	Q3SXP7	199 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	C1orf134	Q5TEV5	83 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	UFSP1	Q6NVU6	142 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	BAGE3	Q86Y29	109 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	CHCHD1	Q96BP2	118 aa	Known RBP	9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	LINC00588	Q9Y4M8	146 aa		9.13	□□□□□ -0.95
LINC01002-231	ENST00000633671	NACA	E9PAV3	2078 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671		A0A087WWL8	130 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671	TRGV4	A0A0C4DH28	118 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671	TNFRSF6B	O95407	300 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671	ZNRF2	Q8NHG8	242 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671	PRSS3P2	Q8NHM4	247 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671	C18orf32	Q8TCD1	76 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671	ST20	Q9HBF5	79 aa		9.12	□□□□□ -0.95
LINC01002-231	ENST00000633671	NBDY	A0A0U1RRE5	68 aa		9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671	KRTAP9-7	A8MTY7	169 aa		9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671		M0QY20	66 aa		9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671	VCY	O14598	125 aa		9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671	SUMO2	P61956	95 aa	Known RBP	9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671	PRADC1	Q9BSG0	188 aa		9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671	JPT2	Q9H910	190 aa		9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671	TNFRSF18	Q9Y5U5	241 aa		9.11	□□□□□ -0.95
LINC01002-231	ENST00000633671	LINC00614	P0C842	121 aa		9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	NDUFA6	P56556	154 aa		9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	RPL36A	P83881	106 aa	Known RBP	9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	RHOH	Q15669	191 aa		9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	SUMO4	Q6EEV6	95 aa		9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	RPL36AL	Q969Q0	106 aa	Known RBP	9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	PACRG	Q96M98	296 aa	Predicted RBP	9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	SAMD10	Q9BYL1	202 aa		9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	PRO0255	Q9UI72	69 aa		9.1	□□□□□ -0.95
LINC01002-231	ENST00000633671	ESD	P10768	282 aa		9.09	□□□□□ -0.95
LINC01002-231	ENST00000633671	GATA1	P15976	413 aa	Predicted RBP	9.09	□□□□□ -0.95
LINC01002-231	ENST00000633671	TMEM97	Q5BJF2	176 aa		9.09	□□□□□ -0.95
LINC01002-231	ENST00000633671	FA2H	Q7L5A8	372 aa		9.09	□□□□□ -0.95
LINC01002-231	ENST00000633671	SH2D6	Q7Z4S9	175 aa		9.09	□□□□□ -0.95
LINC01002-231	ENST00000633671	NRAC	Q8N912	160 aa		9.09	□□□□□ -0.95
LINC01002-231	ENST00000633671	KIR2DL4	Q99706	377 aa		9.09	□□□□□ -0.95
LINC01002-231	ENST00000633671	KIAA1109	Q2LD37	5005 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671		H3BNG1	76 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671		K7EQD1	137 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671	ORMDL2	Q53FV1	153 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671	NIT1	Q86X76	327 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671		Q8N8P6	123 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671	ZNF479	Q96JC4	524 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671		Q9H8V8	135 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671	HHLA3	Q9XRX5	114 aa		9.08	□□□□□ -0.96
LINC01002-231	ENST00000633671	TRBV7-3	A0A075B6L6	115 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	TRBV27	A0A0K0K1C4	114 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	LINC01546	A6NGU7	62 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	C5orf52	A6NGY3	159 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	HSBP1	O75506	76 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	NPY	P01303	97 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	S100A2	P29034	98 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	POLR2K	P53803	58 aa	Known RBP	9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	ESRG	Q1W209	222 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	DAZ4	Q86SG3	579 aa	Known RBP	9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	C6orf223	Q8N319	242 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	VSIG2	Q96IQ7	327 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	SMIM2	Q9BVW6	85 aa		9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	DAZ3	Q9NR90	486 aa	Known RBP	9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	DYNC1H1	Q14204	4646 aa	Known RBP	9.07	□□□□□ -0.96
LINC01002-231	ENST00000633671	DNAH11	Q96DT5	4516 aa		9.06	□□□□□ -0.96
LINC01002-231	ENST00000633671		I3L3M4	83 aa		9.06	□□□□□ -0.96
LINC01002-231	ENST00000633671	NCR2	O95944	276 aa		9.06	□□□□□ -0.96
LINC01002-231	ENST00000633671	SMAGP	Q0VAQ4	97 aa		9.06	□□□□□ -0.96
LINC01002-231	ENST00000633671	FHL2	Q14192	279 aa		9.06	□□□□□ -0.96
LINC01002-231	ENST00000633671	TMEM18	Q96B42	140 aa		9.06	□□□□□ -0.96
LINC01002-231	ENST00000633671		A0A096LPF7	62 aa		9.05	□□□□□ -0.96
LINC01002-231	ENST00000633671	TRAV26-2	A0A0B4J265	109 aa		9.05	□□□□□ -0.96
LINC01002-231	ENST00000633671	SDHAF1	A6NFY7	115 aa		9.05	□□□□□ -0.96
LINC01002-231	ENST00000633671	SMKR1	H3BMG3	65 aa		9.05	□□□□□ -0.96
LINC01002-231	ENST00000633671	SLC25A29	Q8N8R3	303 aa		9.05	□□□□□ -0.96
LINC01002-231	ENST00000633671	UPK3B	Q9BT76	320 aa		9.05	□□□□□ -0.96
LINC01002-231	ENST00000633671	MRPS16	Q9Y3D3	137 aa	Known RBP	9.05	□□□□□ -0.96
LINC01002-231	ENST00000633671	IGHV3-73	A0A0B4J1V6	119 aa		9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	IFI27	P40305	119 aa	Predicted RBP	9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	CRYBA4	P53673	196 aa		9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	SNRPE	P62304	92 aa	Known RBP	9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	LAGE3	Q14657	143 aa		9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	TTC32	Q5I0X7	151 aa		9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	TMEM70	Q9BUB7	260 aa		9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	PKHD1	P08F94	4074 aa		9.04	□□□□□ -0.96
LINC01002-231	ENST00000633671	LOC389332	A0A1B0GUA5	103 aa		9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	SERF1A	O75920	110 aa		9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	FCER1G	P30273	86 aa		9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	RNASEK	Q6P5S7	137 aa	Known RBP	9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	NEXN-AS1	Q8NBZ9	246 aa		9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	RPL39L	Q96EH5	51 aa	Known RBP	9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	GTSF1L	Q9H1H1	148 aa		9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	ICOS	Q9Y6W8	199 aa		9.03	□□□□□ -0.96
LINC01002-231	ENST00000633671	PKD1	P98161	4303 aa		9.03	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms