RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 GATD1Q8NB37 220 aa7.84□□□□□ -1.15
UBR1-212ENST00000627960 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.15
UBR1-212ENST00000627960 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
UBR1-212ENST00000627960 GTSF1Q8WW33 167 aa7.84□□□□□ -1.15
UBR1-212ENST00000627960 hCG_2014768A0A024R1R8 64 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 IGLV10-54A0A075B6I4 117 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 GATCO43716 136 aaKnown RBP7.83□□□□□ -1.16
UBR1-212ENST00000627960 COTL1Q14019 142 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 FAM231DQ6ZW35 169 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 C9orf163Q8N9P6 203 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 CLRN3Q8NCR9 226 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 GFRA4Q9GZZ7 299 aa7.83□□□□□ -1.16
UBR1-212ENST00000627960 TRAV26-2A0A0B4J265 109 aa7.82□□□□□ -1.16
UBR1-212ENST00000627960 UBE2L6O14933 153 aa7.82□□□□□ -1.16
UBR1-212ENST00000627960 AMTP48728 403 aa7.82□□□□□ -1.16
UBR1-212ENST00000627960 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
UBR1-212ENST00000627960 A8MWL6 223 aa7.81□□□□□ -1.16
UBR1-212ENST00000627960 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
UBR1-212ENST00000627960 SMIM15Q7Z3B0 74 aa7.81□□□□□ -1.16
UBR1-212ENST00000627960 J3QL48 77 aa7.8□□□□□ -1.16
UBR1-212ENST00000627960 CEBPGP53567 150 aa7.8□□□□□ -1.16
UBR1-212ENST00000627960 TEX261Q6UWH6 196 aa7.8□□□□□ -1.16
UBR1-212ENST00000627960 RPL39LQ96EH5 51 aaKnown RBP7.8□□□□□ -1.16
UBR1-212ENST00000627960 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
UBR1-212ENST00000627960 KRTAP29-1A8MX34 341 aaPredicted RBP7.79□□□□□ -1.16
UBR1-212ENST00000627960 NDUFS6O75380 124 aaKnown RBP7.79□□□□□ -1.16
UBR1-212ENST00000627960 NCR2O95944 276 aa7.79□□□□□ -1.16
UBR1-212ENST00000627960 CNBPP62633 177 aaKnown RBP7.79□□□□□ -1.16
UBR1-212ENST00000627960 CT83Q5H943 113 aa7.79□□□□□ -1.16
UBR1-212ENST00000627960 SDIM1Q6ZPB5 146 aa7.79□□□□□ -1.16
UBR1-212ENST00000627960 EIF5A2Q9GZV4 153 aaKnown RBP7.79□□□□□ -1.16
UBR1-212ENST00000627960 SMIM7Q9BQ49 75 aa7.78□□□□□ -1.16
UBR1-212ENST00000627960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.78□□□□□ -1.16
UBR1-212ENST00000627960 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 SDHAF1A6NFY7 115 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 H7C423 109 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 SLPIP03973 132 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 SRP19P09132 144 aaKnown RBP7.77□□□□□ -1.17
UBR1-212ENST00000627960 LINC01551Q86U37 167 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 BORCS7Q96B45 105 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 FAM210AQ96ND0 272 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
UBR1-212ENST00000627960 PKHD1L1Q86WI1 4243 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 LRP1Q07954 4544 aaKnown RBP7.76□□□□□ -1.17
UBR1-212ENST00000627960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.76□□□□□ -1.17
UBR1-212ENST00000627960 IGKV2-29A2NJV5 120 aaPredicted RBP7.76□□□□□ -1.17
UBR1-212ENST00000627960 GAGE12HA6NDE8 117 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 ZNF727A8MUV8 499 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 PANO1I0J062 215 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 I3L3M4 83 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 APCSP02743 223 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 AMMECR1LQ6DCA0 310 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 TSKUQ8WUA8 353 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 OSTCQ9NRP0 149 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
UBR1-212ENST00000627960 IGHV3-64A0A075B6Q5 118 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.75□□□□□ -1.17
UBR1-212ENST00000627960 IGKV3OR2-268A0A0C4DH90 116 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 FAM231BA6NCW3 169 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 GAS8-AS1O95177 125 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 FGF6P10767 208 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 PMCHP20382 165 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 RPL37AP61513 92 aaKnown RBP7.75□□□□□ -1.17
UBR1-212ENST00000627960 RNASEKQ6P5S7 137 aaKnown RBP7.75□□□□□ -1.17
UBR1-212ENST00000627960 CFAP161Q6P656 301 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 TMEM191AQ9H0A3 160 aa7.75□□□□□ -1.17
UBR1-212ENST00000627960 HIGD1CA8MV81 97 aa7.74□□□□□ -1.17
UBR1-212ENST00000627960 CIRBPQ14011 172 aaKnown RBP7.74□□□□□ -1.17
UBR1-212ENST00000627960 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
UBR1-212ENST00000627960 CHCHD10Q8WYQ3 142 aaPredicted RBP7.74□□□□□ -1.17
UBR1-212ENST00000627960 RNF185Q96GF1 192 aa7.74□□□□□ -1.17
UBR1-212ENST00000627960 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
UBR1-212ENST00000627960 OXTP01178 125 aa7.73□□□□□ -1.17
UBR1-212ENST00000627960 TSHBP01222 138 aa7.73□□□□□ -1.17
UBR1-212ENST00000627960 ESDP10768 282 aa7.73□□□□□ -1.17
UBR1-212ENST00000627960 ZNF25P17030 456 aaPredicted RBP7.73□□□□□ -1.17
UBR1-212ENST00000627960 RAB4AP20338 218 aa7.73□□□□□ -1.17
UBR1-212ENST00000627960 A0A1B0GVG6 124 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 POLR2KP53803 58 aaKnown RBP7.72□□□□□ -1.17
UBR1-212ENST00000627960 TMEM241Q24JQ0 296 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 OR5A1Q8NGJ0 315 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 MRAP2Q96G30 205 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 TMEM101Q96IK0 257 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 BTF3L4Q96K17 158 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 TMEM242Q9NWH2 141 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 V9GYV3 84 aa7.72□□□□□ -1.17
UBR1-212ENST00000627960 TRBV27A0A0K0K1C4 114 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 RPS10P46783 165 aaKnown RBP7.71□□□□□ -1.18
UBR1-212ENST00000627960 FOXI1Q12951 378 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 RIGQ13278 110 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 HIGD2BQ4VC39 106 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 FAM74A3Q4VXF1 159 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 AMN1Q8IY45 258 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 NUP35Q8NFH5 326 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 ISOC2Q96AB3 205 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 DPH3Q96FX2 82 aa7.71□□□□□ -1.18
UBR1-212ENST00000627960 GVQW2A0A096LPI5 108 aaPredicted RBP7.7□□□□□ -1.18
UBR1-212ENST00000627960 CHTF8P0CG12 524 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms