RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 RNF183Q96D59 192 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 ZNF479Q96JC4 524 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 KIR2DL4Q99706 377 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 LYSTQ99698 3801 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 CIDEAO60543 219 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 SPATA12Q7Z6I5 190 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 MAP1LC3CQ9BXW4 147 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 NUDT3O95989 172 aa6.74□□□□□ -1.33
PDLIM5-223ENST00000627587 MIFP14174 115 aa6.74□□□□□ -1.33
PDLIM5-223ENST00000627587 NEGR1Q7Z3B1 354 aa6.74□□□□□ -1.33
PDLIM5-223ENST00000627587 TNFRSF18Q9Y5U5 241 aa6.74□□□□□ -1.33
PDLIM5-223ENST00000627587 STARD9Q9P2P6 4700 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 LINC00612Q8N6U2 182 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 DNAJC30Q96LL9 226 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 IGHV4-28A0A0C4DH34 117 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 LYRM9A8MSI8 78 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 SYS1-DBNDD2H3BUS1 97 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 I3L3M4 83 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 K7EQD1 137 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 DEFB130BP0DP73 79 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 DEFB130AP0DP74 79 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 G0S2P27469 103 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 Q8NAQ8 132 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 NEXN-AS1Q8NBZ9 246 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 C18orf15Q96N68 181 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 TP53TG1Q9Y2A0 90 aa6.73□□□□□ -1.33
PDLIM5-223ENST00000627587 TRGV4A0A0C4DH28 118 aa6.72□□□□□ -1.33
PDLIM5-223ENST00000627587 TRBV10-1A0A0K0K1A3 114 aa6.72□□□□□ -1.33
PDLIM5-223ENST00000627587 C20orf202A1L168 122 aa6.72□□□□□ -1.33
PDLIM5-223ENST00000627587 XP32Q5T750 250 aa6.72□□□□□ -1.33
PDLIM5-223ENST00000627587 FAM222AQ5U5X8 452 aa6.72□□□□□ -1.33
PDLIM5-223ENST00000627587 DEFB104AQ8WTQ1 72 aa6.72□□□□□ -1.33
PDLIM5-223ENST00000627587 IFI27L1Q96BM0 104 aa6.72□□□□□ -1.33
PDLIM5-223ENST00000627587 H0Y8G0 127 aa6.71□□□□□ -1.34
PDLIM5-223ENST00000627587 ATP5LO75964 103 aa6.71□□□□□ -1.34
PDLIM5-223ENST00000627587 PET117Q6UWS5 81 aa6.71□□□□□ -1.34
PDLIM5-223ENST00000627587 SLC25A29Q8N8R3 303 aa6.71□□□□□ -1.34
PDLIM5-223ENST00000627587 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.34
PDLIM5-223ENST00000627587 HYDINQ4G0P3 5121 aa6.71□□□□□ -1.34
PDLIM5-223ENST00000627587 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.34
PDLIM5-223ENST00000627587 TRBV6-4A0A1B0GX49 114 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 LINC01549A6NIU2 74 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 DEFB4AO15263 64 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 RPL36AP83881 106 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 RHOHQ15669 191 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 C2orf66Q6UXQ4 117 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 RPL36ALQ969Q0 106 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 TOMM6Q96B49 74 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 DKK2Q9UBU2 259 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 TRBV7-3A0A075B6L6 115 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 TSHBP01222 138 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 ZNRF2Q8NHG8 242 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 ALMS1Q8TCU4 4167 aa6.7□□□□□ -1.34
PDLIM5-223ENST00000627587 HSBP1L1C9JCN9 74 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 SPART-AS1P0CW21 52 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 DAD1P61803 113 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 FHL2Q14192 279 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 TEX43Q6ZNM6 134 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 SCGB3A1Q96QR1 104 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 PRADC1Q9BSG0 188 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 RETNQ9HD89 108 aa6.69□□□□□ -1.34
PDLIM5-223ENST00000627587 TEX48A0A1B0GUV7 120 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 PRSS1P07477 247 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 PHLDA1Q8WV24 401 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 GAGE12JA6NER3 117 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 GAGE1Q13065 139 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 GAGE4Q13068 117 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 GAGE5Q13069 117 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 GAGE13Q4V321 117 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 LGALS9CQ6DKI2 356 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 Q6ZN92 141 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 ERASQ7Z444 233 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 VAMP8Q9BV40 100 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 HHLA3Q9XRX5 114 aa6.68□□□□□ -1.34
PDLIM5-223ENST00000627587 IGHV3-38A0A0C4DH36 116 aa6.67□□□□□ -1.34
PDLIM5-223ENST00000627587 RPL39P62891 51 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-223ENST00000627587 DAZ4Q86SG3 579 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-223ENST00000627587 ATOH7Q8N100 152 aa6.67□□□□□ -1.34
PDLIM5-223ENST00000627587 C20orf203Q8NBC4 194 aa6.67□□□□□ -1.34
PDLIM5-223ENST00000627587 DAZ3Q9NR90 486 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-223ENST00000627587 LOC100131303A0A0U1RQF7 123 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 UBE2D3P61077 147 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 UBE2D2P62837 147 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 PRO0255Q9UI72 69 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 ATP5G1P05496 136 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 TMEM141Q96I45 108 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 PMCHL2Q9BQD1 86 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 PAM16Q9Y3D7 125 aa6.66□□□□□ -1.34
PDLIM5-223ENST00000627587 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
PDLIM5-223ENST00000627587 TSTD3H0UI37 97 aa6.65□□□□□ -1.34
PDLIM5-223ENST00000627587 LINC00694P0DN24 101 aa6.65□□□□□ -1.34
PDLIM5-223ENST00000627587 CRYBA4P53673 196 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms