RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DNAH2Q9P225 4427 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 A0A087WTM6 91 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 APCSP02743 223 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 PMCHP20382 165 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 SMAGPQ0VAQ4 97 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 MIAQ16674 131 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 ATRAIDQ6UW56 229 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 RNF185Q96GF1 192 aa9.39□□□□□ -0.91
SNRPA1-216ENST00000626000 TRBV27A0A0K0K1C4 114 aa9.38□□□□□ -0.91
SNRPA1-216ENST00000626000 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
SNRPA1-216ENST00000626000 C16orf90A8MZG2 172 aa9.38□□□□□ -0.91
SNRPA1-216ENST00000626000 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
SNRPA1-216ENST00000626000 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
SNRPA1-216ENST00000626000 C1orf43Q9BWL3 253 aa9.38□□□□□ -0.91
SNRPA1-216ENST00000626000 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 VCYO14598 125 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 PHOX2AO14813 284 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 ZNF25P17030 456 aaPredicted RBP9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 RBX1P62877 108 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 GAGE6Q13070 117 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 MRPL54Q6P161 138 aaKnown RBP9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 SPATA12Q7Z6I5 190 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 C20orf78Q9BR46 151 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 TMEM70Q9BUB7 260 aa9.37□□□□□ -0.91
SNRPA1-216ENST00000626000 TRBV24-1A0A075B6N3 115 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 CKS2P33552 79 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 SUMO2P61956 95 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 Q8N3U1 123 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 KIR2DL4Q99706 377 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 FAT2Q9NYQ8 4349 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
SNRPA1-216ENST00000626000 TRAV8-4A0A0B4J246 113 aa9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 S100PP25815 95 aa9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 NDUFA5Q16718 116 aa9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 Q8N976 141 aa9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
SNRPA1-216ENST00000626000 ADCYAP1P18509 176 aa9.34□□□□□ -0.91
SNRPA1-216ENST00000626000 FCER1GP30273 86 aa9.34□□□□□ -0.91
SNRPA1-216ENST00000626000 RHEBQ15382 184 aa9.34□□□□□ -0.91
SNRPA1-216ENST00000626000 C14orf177Q52M58 125 aa9.34□□□□□ -0.91
SNRPA1-216ENST00000626000 ORMDL3Q8N138 153 aa9.34□□□□□ -0.91
SNRPA1-216ENST00000626000 CARHSP1Q9Y2V2 147 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-216ENST00000626000 LRCOL1A6NCL2 159 aa9.33□□□□□ -0.92
SNRPA1-216ENST00000626000 RPS10P46783 165 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-216ENST00000626000 REG3AQ06141 175 aa9.33□□□□□ -0.92
SNRPA1-216ENST00000626000 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
SNRPA1-216ENST00000626000 NRACQ8N912 160 aa9.33□□□□□ -0.92
SNRPA1-216ENST00000626000 TMEM18Q96B42 140 aa9.33□□□□□ -0.92
SNRPA1-216ENST00000626000 TMEM101Q96IK0 257 aa9.33□□□□□ -0.92
SNRPA1-216ENST00000626000 C7orf77A4D0Y5 90 aa9.32□□□□□ -0.92
SNRPA1-216ENST00000626000 J3QL48 77 aa9.32□□□□□ -0.92
SNRPA1-216ENST00000626000 ENHOQ6UWT2 76 aa9.32□□□□□ -0.92
SNRPA1-216ENST00000626000 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
SNRPA1-216ENST00000626000 Q8N814 137 aa9.32□□□□□ -0.92
SNRPA1-216ENST00000626000 D6R8Y8 96 aa9.31□□□□□ -0.92
SNRPA1-216ENST00000626000 TNFRSF6BO95407 300 aa9.31□□□□□ -0.92
SNRPA1-216ENST00000626000 TSHBP01222 138 aa9.31□□□□□ -0.92
SNRPA1-216ENST00000626000 ESDP10768 282 aa9.31□□□□□ -0.92
SNRPA1-216ENST00000626000 COX19Q49B96 90 aa9.31□□□□□ -0.92
SNRPA1-216ENST00000626000 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-216ENST00000626000 C20orf203Q8NBC4 194 aa9.31□□□□□ -0.92
SNRPA1-216ENST00000626000 FGF6P10767 208 aa9.3□□□□□ -0.92
SNRPA1-216ENST00000626000 TMEM136Q6ZRR5 245 aa9.3□□□□□ -0.92
SNRPA1-216ENST00000626000 MRPL52Q86TS9 123 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-216ENST00000626000 SMIM2Q9BVW6 85 aa9.3□□□□□ -0.92
SNRPA1-216ENST00000626000 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 SMKR1H3BMG3 65 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 CDK2AP2O75956 126 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 GAS8-AS1O95177 125 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 DGAT2L7PQ6IED9 249 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 PRELID3AQ96N28 172 aa9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-216ENST00000626000 PKHD1P08F94 4074 aa9.28□□□□□ -0.92
SNRPA1-216ENST00000626000 PKD1P98161 4303 aa9.28□□□□□ -0.92
SNRPA1-216ENST00000626000 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
SNRPA1-216ENST00000626000 SNAPINO95295 136 aa9.28□□□□□ -0.92
SNRPA1-216ENST00000626000 RAB5AP20339 215 aa9.28□□□□□ -0.92
SNRPA1-216ENST00000626000 SVBPQ8N300 66 aa9.28□□□□□ -0.92
SNRPA1-216ENST00000626000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 K7EMI3 77 aa9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 CCL25O15444 150 aa9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 HLA-DQA1P01909 254 aa9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 MT-ND6P03923 174 aa9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 CLRN3Q8NCR9 226 aa9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
SNRPA1-216ENST00000626000 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms