RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 CTRLP40313 264 aa12.38□□□□□ -0.43
ATG4B-226ENST00000625810 AMTP48728 403 aa12.38□□□□□ -0.43
ATG4B-226ENST00000625810 RNASE7Q9H1E1 156 aaKnown RBP12.38□□□□□ -0.43
ATG4B-226ENST00000625810 RPP21Q9H633 154 aaKnown RBP12.38□□□□□ -0.43
ATG4B-226ENST00000625810 hDV102S1A0JD36 115 aa12.37□□□□□ -0.43
ATG4B-226ENST00000625810 OCC1Q8TAD7 63 aa12.37□□□□□ -0.43
ATG4B-226ENST00000625810 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
ATG4B-226ENST00000625810 GFRA4Q9GZZ7 299 aa12.36□□□□□ -0.43
ATG4B-226ENST00000625810 AP5S1Q9NUS5 200 aa12.36□□□□□ -0.43
ATG4B-226ENST00000625810 FAT3Q8TDW7 4589 aa12.36□□□□□ -0.43
ATG4B-226ENST00000625810 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
ATG4B-226ENST00000625810 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
ATG4B-226ENST00000625810 K7EN84 100 aa12.34□□□□□ -0.43
ATG4B-226ENST00000625810 SDIM1Q6ZPB5 146 aa12.34□□□□□ -0.43
ATG4B-226ENST00000625810 GATD1Q8NB37 220 aa12.34□□□□□ -0.43
ATG4B-226ENST00000625810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-226ENST00000625810 PKHD1L1Q86WI1 4243 aa12.33□□□□□ -0.44
ATG4B-226ENST00000625810 TRAV26-2A0A0B4J265 109 aa12.33□□□□□ -0.44
ATG4B-226ENST00000625810 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-226ENST00000625810 GATCO43716 136 aaKnown RBP12.32□□□□□ -0.44
ATG4B-226ENST00000625810 OXTP01178 125 aa12.32□□□□□ -0.44
ATG4B-226ENST00000625810 CNBPP62633 177 aaKnown RBP12.32□□□□□ -0.44
ATG4B-226ENST00000625810 DPH3Q96FX2 82 aa12.32□□□□□ -0.44
ATG4B-226ENST00000625810 IGKV3OR2-268A0A0C4DH90 116 aa12.31□□□□□ -0.44
ATG4B-226ENST00000625810 BLOC1S1P78537 153 aa12.31□□□□□ -0.44
ATG4B-226ENST00000625810 AMMECR1LQ6DCA0 310 aa12.31□□□□□ -0.44
ATG4B-226ENST00000625810 IGHV3-64A0A075B6Q5 118 aa12.3□□□□□ -0.44
ATG4B-226ENST00000625810 TMEM250H0YL14 139 aa12.3□□□□□ -0.44
ATG4B-226ENST00000625810 PANO1I0J062 215 aa12.3□□□□□ -0.44
ATG4B-226ENST00000625810 GTSF1Q8WW33 167 aa12.3□□□□□ -0.44
ATG4B-226ENST00000625810 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
ATG4B-226ENST00000625810 GAGE12HA6NDE8 117 aa12.29□□□□□ -0.44
ATG4B-226ENST00000625810 CEBPGP53567 150 aa12.29□□□□□ -0.44
ATG4B-226ENST00000625810 FOXA3P55318 350 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-226ENST00000625810 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
ATG4B-226ENST00000625810 CFAP161Q6P656 301 aa12.29□□□□□ -0.44
ATG4B-226ENST00000625810 TEX261Q6UWH6 196 aa12.29□□□□□ -0.44
ATG4B-226ENST00000625810 ALKAL2Q6UX46 152 aa12.29□□□□□ -0.44
ATG4B-226ENST00000625810 A8MWL6 223 aa12.28□□□□□ -0.44
ATG4B-226ENST00000625810 NCR2O95944 276 aa12.28□□□□□ -0.44
ATG4B-226ENST00000625810 APCSP02743 223 aa12.28□□□□□ -0.44
ATG4B-226ENST00000625810 Q6ZNX1 250 aa12.28□□□□□ -0.44
ATG4B-226ENST00000625810 AKAP14Q86UN6 197 aa12.28□□□□□ -0.44
ATG4B-226ENST00000625810 HMCN2Q8NDA2 5059 aa12.28□□□□□ -0.44
ATG4B-226ENST00000625810 SERTAD4-AS1Q5TG53 156 aa12.27□□□□□ -0.45
ATG4B-226ENST00000625810 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
ATG4B-226ENST00000625810 BORCS7Q96B45 105 aa12.27□□□□□ -0.45
ATG4B-226ENST00000625810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-226ENST00000625810 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-226ENST00000625810 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
ATG4B-226ENST00000625810 SLPIP03973 132 aa12.26□□□□□ -0.45
ATG4B-226ENST00000625810 HNRNPA3P51991 378 aaKnown RBP12.26□□□□□ -0.45
ATG4B-226ENST00000625810 H7C423 109 aa12.25□□□□□ -0.45
ATG4B-226ENST00000625810 PMCHP20382 165 aa12.25□□□□□ -0.45
ATG4B-226ENST00000625810 hCG_2014768A0A024R1R8 64 aa12.24□□□□□ -0.45
ATG4B-226ENST00000625810 FGF6P10767 208 aa12.24□□□□□ -0.45
ATG4B-226ENST00000625810 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
ATG4B-226ENST00000625810 C15orf56Q8N910 161 aa12.24□□□□□ -0.45
ATG4B-226ENST00000625810 CHCHD10Q8WYQ3 142 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-226ENST00000625810 I3L3M4 83 aa12.23□□□□□ -0.45
ATG4B-226ENST00000625810 CHTF8P0CG12 524 aa12.23□□□□□ -0.45
ATG4B-226ENST00000625810 HIGD2BQ4VC39 106 aa12.23□□□□□ -0.45
ATG4B-226ENST00000625810 CT83Q5H943 113 aa12.23□□□□□ -0.45
ATG4B-226ENST00000625810 RNF185Q96GF1 192 aa12.23□□□□□ -0.45
ATG4B-226ENST00000625810 BTF3L4Q96K17 158 aa12.23□□□□□ -0.45
ATG4B-226ENST00000625810 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
ATG4B-226ENST00000625810 A0A087WYN8 130 aa12.22□□□□□ -0.45
ATG4B-226ENST00000625810 RPS10P46783 165 aaKnown RBP12.22□□□□□ -0.45
ATG4B-226ENST00000625810 LYPD6BQ8NI32 183 aa12.22□□□□□ -0.45
ATG4B-226ENST00000625810 TMEM101Q96IK0 257 aa12.22□□□□□ -0.45
ATG4B-226ENST00000625810 SMIM7Q9BQ49 75 aa12.21□□□□□ -0.45
ATG4B-226ENST00000625810 ST20Q9HBF5 79 aa12.21□□□□□ -0.45
ATG4B-226ENST00000625810 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
ATG4B-226ENST00000625810 A0A1B0GUT8 65 aa12.2□□□□□ -0.46
ATG4B-226ENST00000625810 ZNF25P17030 456 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-226ENST00000625810 SPACA4Q8TDM5 124 aa12.2□□□□□ -0.46
ATG4B-226ENST00000625810 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
ATG4B-226ENST00000625810 HIGD1CA8MV81 97 aa12.19□□□□□ -0.46
ATG4B-226ENST00000625810 COX6A2Q02221 97 aa12.19□□□□□ -0.46
ATG4B-226ENST00000625810 OR5A1Q8NGJ0 315 aa12.19□□□□□ -0.46
ATG4B-226ENST00000625810 TSKUQ8WUA8 353 aa12.19□□□□□ -0.46
ATG4B-226ENST00000625810 FAM231BA6NCW3 169 aa12.18□□□□□ -0.46
ATG4B-226ENST00000625810 LINC01551Q86U37 167 aa12.18□□□□□ -0.46
ATG4B-226ENST00000625810 TMEM191AQ9H0A3 160 aa12.18□□□□□ -0.46
ATG4B-226ENST00000625810 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
ATG4B-226ENST00000625810 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
ATG4B-226ENST00000625810 GAS8-AS1O95177 125 aa12.17□□□□□ -0.46
ATG4B-226ENST00000625810 XCL1P47992 114 aa12.17□□□□□ -0.46
ATG4B-226ENST00000625810 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
ATG4B-226ENST00000625810 OSTCQ9NRP0 149 aa12.17□□□□□ -0.46
ATG4B-226ENST00000625810 GVQW2A0A096LPI5 108 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-226ENST00000625810 TSHBP01222 138 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 ESDP10768 282 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 FOXI1Q12951 378 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 MAJINQ3KP22 176 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 PRSS3P2Q8NHM4 247 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 C7orf33Q8WU49 177 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 FAM210AQ96ND0 272 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 PLAC8Q9NZF1 115 aa12.16□□□□□ -0.46
ATG4B-226ENST00000625810 PLA2G2DQ9UNK4 145 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms