RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 C11orf52Q96A22 123 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 XKRY2A2RUG3 117 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 F2Z2F3 143 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 COTL1Q14019 142 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 LYZL1Q6UWQ5 148 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 C19orf71A6NCJ1 209 aa12□□□□□ -0.49
SMN1-211ENST00000625245 PHOX2AO14813 284 aa12□□□□□ -0.49
SMN1-211ENST00000625245 IFNA1P01562 189 aa12□□□□□ -0.49
SMN1-211ENST00000625245 GNG4P50150 75 aa12□□□□□ -0.49
SMN1-211ENST00000625245 EIF5AP63241 154 aaKnown RBP12□□□□□ -0.49
SMN1-211ENST00000625245 COX6A2Q02221 97 aa12□□□□□ -0.49
SMN1-211ENST00000625245 CFAP161Q6P656 301 aa12□□□□□ -0.49
SMN1-211ENST00000625245 PLAC8Q9NZF1 115 aa12□□□□□ -0.49
SMN1-211ENST00000625245 HMSDA8MTL9 139 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 NTF3P20783 257 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 HIGD2BQ4VC39 106 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 C15orf56Q8N910 161 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
SMN1-211ENST00000625245 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
SMN1-211ENST00000625245 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
SMN1-211ENST00000625245 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
SMN1-211ENST00000625245 TWIST1Q15672 202 aa11.97□□□□□ -0.49
SMN1-211ENST00000625245 AMMECR1LQ6DCA0 310 aa11.96□□□□□ -0.49
SMN1-211ENST00000625245 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
SMN1-211ENST00000625245 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
SMN1-211ENST00000625245 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 NDUFS6O75380 124 aaKnown RBP11.95□□□□□ -0.5
SMN1-211ENST00000625245 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 CHCHD10Q8WYQ3 142 aaPredicted RBP11.95□□□□□ -0.5
SMN1-211ENST00000625245 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 BIN3Q9NQY0 253 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
SMN1-211ENST00000625245 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
SMN1-211ENST00000625245 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
SMN1-211ENST00000625245 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
SMN1-211ENST00000625245 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
SMN1-211ENST00000625245 STPG4Q8N801 248 aa11.93□□□□□ -0.5
SMN1-211ENST00000625245 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
SMN1-211ENST00000625245 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
SMN1-211ENST00000625245 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
SMN1-211ENST00000625245 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
SMN1-211ENST00000625245 PDE6DO43924 150 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 CTRLP40313 264 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 Q6ZNX1 250 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
SMN1-211ENST00000625245 TNXBP22105 4242 aa11.91□□□□□ -0.5
SMN1-211ENST00000625245 PRR3P79522 188 aaKnown RBP11.9□□□□□ -0.5
SMN1-211ENST00000625245 LINC01600Q96MT4 127 aa11.9□□□□□ -0.5
SMN1-211ENST00000625245 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
SMN1-211ENST00000625245 NCR2O95944 276 aa11.89□□□□□ -0.51
SMN1-211ENST00000625245 APCSP02743 223 aa11.89□□□□□ -0.51
SMN1-211ENST00000625245 ODF1Q14990 250 aa11.89□□□□□ -0.51
SMN1-211ENST00000625245 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
SMN1-211ENST00000625245 A0A096LNI7 61 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 FGF6P10767 208 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
SMN1-211ENST00000625245 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
SMN1-211ENST00000625245 H7C423 109 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 BCL2P10415 239 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 XCL1P47992 114 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 FOXA3P55318 350 aaPredicted RBP11.87□□□□□ -0.51
SMN1-211ENST00000625245 FOXI1Q12951 378 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 LRP2P98164 4655 aa11.86□□□□□ -0.51
SMN1-211ENST00000625245 SDHAF1A6NFY7 115 aa11.86□□□□□ -0.51
SMN1-211ENST00000625245 LINC00526Q96FQ7 95 aa11.86□□□□□ -0.51
SMN1-211ENST00000625245 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 BTF3L4Q96K17 158 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 K7EN84 100 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 PMCHP20382 165 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 TEX261Q6UWH6 196 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
SMN1-211ENST00000625245 I3L3M4 83 aa11.83□□□□□ -0.52
SMN1-211ENST00000625245 CCL25O15444 150 aa11.83□□□□□ -0.52
SMN1-211ENST00000625245 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.52
SMN1-211ENST00000625245 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 REG3GQ6UW15 175 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 PKIGQ9Y2B9 76 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
SMN1-211ENST00000625245 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
SMN1-211ENST00000625245 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
SMN1-211ENST00000625245 SS18Q15532 418 aa11.8□□□□□ -0.52
SMN1-211ENST00000625245 ZNF561-AS1K7EIQ3 104 aa11.79□□□□□ -0.52
SMN1-211ENST00000625245 TMEM242Q9NWH2 141 aa11.79□□□□□ -0.52
SMN1-211ENST00000625245 KRTAP10-8P60410 259 aa11.78□□□□□ -0.52
SMN1-211ENST00000625245 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
SMN1-211ENST00000625245 Q6ZRP5 223 aa11.78□□□□□ -0.52
SMN1-211ENST00000625245 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms