RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 C12orf74Q32Q52 190 aa8.26□□□□□ -1.09
LINC00963-220ENST00000625171 ZNRF2Q8NHG8 242 aa8.26□□□□□ -1.09
LINC00963-220ENST00000625171 DEFB4AO15263 64 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 NUDT3O95989 172 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 SMIM6P0DI80 62 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 BTF3P20290 206 aaKnown RBP8.25□□□□□ -1.09
LINC00963-220ENST00000625171 PET117Q6UWS5 81 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 ERASQ7Z444 233 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 SH2D6Q7Z4S9 175 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 RETNQ9HD89 108 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 CYSLTR1Q9Y271 337 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 PYGO1Q9Y3Y4 419 aa8.25□□□□□ -1.09
LINC00963-220ENST00000625171 H7C423 109 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 C3orf79P0CE67 100 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 COTL1Q14019 142 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 PMCHL1Q16048 86 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 PYY3Q5JQD4 70 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 VSIG2Q96IQ7 327 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 TIMM21Q9BVV7 248 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 STAB2Q8WWQ8 2551 aa8.24□□□□□ -1.09
LINC00963-220ENST00000625171 A0A0J9YWU9 116 aa8.23□□□□□ -1.09
LINC00963-220ENST00000625171 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
LINC00963-220ENST00000625171 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
LINC00963-220ENST00000625171 PAX4O43316 350 aa8.23□□□□□ -1.09
LINC00963-220ENST00000625171 C11orf45Q8TAV5 145 aa8.23□□□□□ -1.09
LINC00963-220ENST00000625171 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
LINC00963-220ENST00000625171 TMEM141Q96I45 108 aa8.23□□□□□ -1.09
LINC00963-220ENST00000625171 CSDC2Q9Y534 153 aaKnown RBP8.23□□□□□ -1.09
LINC00963-220ENST00000625171 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.22□□□□□ -1.09
LINC00963-220ENST00000625171 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
LINC00963-220ENST00000625171 TRAV12-1A0A0B4J245 112 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 GAGE12JA6NER3 117 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 GYPEP15421 78 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 TIRAPP58753 221 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 GAGE1Q13065 139 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 GAGE4Q13068 117 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 GAGE5Q13069 117 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
LINC00963-220ENST00000625171 GAGE13Q4V321 117 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 LINC01545Q5VT33 79 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 LGALS9CQ6DKI2 356 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 NEGR1Q7Z3B1 354 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 MRPL52Q86TS9 123 aaKnown RBP8.21□□□□□ -1.1
LINC00963-220ENST00000625171 LINC00518Q8N0U6 118 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 Q8N976 141 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 ATP6V0E2Q8NHE4 81 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 SPANXA1Q9NS26 97 aa8.21□□□□□ -1.1
LINC00963-220ENST00000625171 TRBV6-8A0A0A6YYG3 113 aa8.2□□□□□ -1.1
LINC00963-220ENST00000625171 F5H768 121 aa8.2□□□□□ -1.1
LINC00963-220ENST00000625171 C3orf84H3BNL1 204 aa8.2□□□□□ -1.1
LINC00963-220ENST00000625171 PAPPA-AS1Q5QFB9 102 aa8.2□□□□□ -1.1
LINC00963-220ENST00000625171 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
LINC00963-220ENST00000625171 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
LINC00963-220ENST00000625171 SCGB3A1Q96QR1 104 aa8.2□□□□□ -1.1
LINC00963-220ENST00000625171 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
LINC00963-220ENST00000625171 KRTDAPP60985 99 aa8.19□□□□□ -1.1
LINC00963-220ENST00000625171 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
LINC00963-220ENST00000625171 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
LINC00963-220ENST00000625171 TRBV25-1A0A075B6N4 114 aa8.18□□□□□ -1.1
LINC00963-220ENST00000625171 C20orf202A1L168 122 aa8.18□□□□□ -1.1
LINC00963-220ENST00000625171 Q6ZTC4 211 aa8.18□□□□□ -1.1
LINC00963-220ENST00000625171 PHLDA1Q8WV24 401 aaPredicted RBP8.18□□□□□ -1.1
LINC00963-220ENST00000625171 ICOSQ9Y6W8 199 aa8.18□□□□□ -1.1
LINC00963-220ENST00000625171 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
LINC00963-220ENST00000625171 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
LINC00963-220ENST00000625171 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
LINC00963-220ENST00000625171 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
LINC00963-220ENST00000625171 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
LINC00963-220ENST00000625171 Q6ZN92 141 aa8.17□□□□□ -1.1
LINC00963-220ENST00000625171 TEX43Q6ZNM6 134 aa8.17□□□□□ -1.1
LINC00963-220ENST00000625171 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
LINC00963-220ENST00000625171 A0A087WX48 190 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 A0A096LPF7 62 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 A0A1B0GUV1 79 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 SCGB1D1O95968 90 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 PRSS1P07477 247 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 ODF1Q14990 250 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 BAALCQ8WXS3 180 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 AMELXQ99217 191 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 TMEM243Q9BU79 118 aa8.16□□□□□ -1.1
LINC00963-220ENST00000625171 DEFB131BA0A096LNP1 70 aa8.15□□□□□ -1.1
LINC00963-220ENST00000625171 NANOS2P60321 138 aaKnown RBP8.15□□□□□ -1.1
LINC00963-220ENST00000625171 PKIAP61925 76 aa8.15□□□□□ -1.1
LINC00963-220ENST00000625171 PMVKQ15126 192 aa8.15□□□□□ -1.1
LINC00963-220ENST00000625171 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.1
LINC00963-220ENST00000625171 C12orf57Q99622 126 aa8.15□□□□□ -1.1
LINC00963-220ENST00000625171 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.11
LINC00963-220ENST00000625171 IGLV4-3A0A075B6K6 122 aa8.14□□□□□ -1.11
LINC00963-220ENST00000625171 A0A0J9YY99 117 aa8.14□□□□□ -1.11
LINC00963-220ENST00000625171 PRSS29PA6NIE9 313 aa8.14□□□□□ -1.11
LINC00963-220ENST00000625171 LELP1Q5T871 98 aa8.14□□□□□ -1.11
LINC00963-220ENST00000625171 FAM19A3Q7Z5A8 133 aa8.14□□□□□ -1.11
LINC00963-220ENST00000625171 CST9LQ9H4G1 147 aa8.14□□□□□ -1.11
LINC00963-220ENST00000625171 HUWE1Q7Z6Z7 4374 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms