RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 KRTAP10-4P60372 401 aaPredicted RBP6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 TWIST1Q15672 202 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 MIAQ16674 131 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 TMEM97Q5BJF2 176 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 WDR73Q6P4I2 378 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 RPL39LQ96EH5 51 aaKnown RBP6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 BIN3Q9NQY0 253 aa6.58□□□□□ -1.36
PCDHGC3-207ENST00000622656 TMEM250H0YL14 139 aa6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 PANO1I0J062 215 aa6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 TAGLN2P37802 199 aaKnown RBP6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 REG3AQ06141 175 aa6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 PGLYRP4Q96LB8 373 aa6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 CHAC1Q9BUX1 264 aa6.57□□□□□ -1.36
PCDHGC3-207ENST00000622656 GATCO43716 136 aaKnown RBP6.56□□□□□ -1.36
PCDHGC3-207ENST00000622656 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 SLPIP03973 132 aa6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 SRP19P09132 144 aaKnown RBP6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 AMTP48728 403 aa6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 PKIAP61925 76 aa6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 FAM231DQ6ZW35 169 aa6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 LINC01551Q86U37 167 aa6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
PCDHGC3-207ENST00000622656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 IGKV2-29A2NJV5 120 aaPredicted RBP6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 C9JQL5 133 aa6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 COTL1Q14019 142 aa6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 C14orf177Q52M58 125 aa6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 FAM210AQ96ND0 272 aa6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 SMIM7Q9BQ49 75 aa6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 EIF5A2Q9GZV4 153 aaKnown RBP6.54□□□□□ -1.36
PCDHGC3-207ENST00000622656 IGKV3OR2-268A0A0C4DH90 116 aa6.53□□□□□ -1.36
PCDHGC3-207ENST00000622656 FAM231BA6NCW3 169 aa6.53□□□□□ -1.36
PCDHGC3-207ENST00000622656 A8MWL6 223 aa6.53□□□□□ -1.36
PCDHGC3-207ENST00000622656 C9orf163Q8N9P6 203 aa6.53□□□□□ -1.36
PCDHGC3-207ENST00000622656 RNF185Q96GF1 192 aa6.53□□□□□ -1.36
PCDHGC3-207ENST00000622656 SDHAF1A6NFY7 115 aa6.52□□□□□ -1.37
PCDHGC3-207ENST00000622656 ZNF727A8MUV8 499 aa6.52□□□□□ -1.37
PCDHGC3-207ENST00000622656 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
PCDHGC3-207ENST00000622656 RPS10P46783 165 aaKnown RBP6.52□□□□□ -1.37
PCDHGC3-207ENST00000622656 SRSF3P84103 164 aaKnown RBP6.52□□□□□ -1.37
PCDHGC3-207ENST00000622656 SDIM1Q6ZPB5 146 aa6.52□□□□□ -1.37
PCDHGC3-207ENST00000622656 V9GYV3 84 aa6.52□□□□□ -1.37
PCDHGC3-207ENST00000622656 GAGE12HA6NDE8 117 aa6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 HIGD1CA8MV81 97 aa6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 UBE2L6O14933 153 aa6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 HNRNPA3P51991 378 aaKnown RBP6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 CT83Q5H943 113 aa6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 DGAT2L7PQ6IED9 249 aa6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 C15orf56Q8N910 161 aa6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 TSKUQ8WUA8 353 aa6.51□□□□□ -1.37
PCDHGC3-207ENST00000622656 TRAV8-4A0A0B4J246 113 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 hDV102S1A0JD36 115 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 SMKR1H3BMG3 65 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 TSHBP01222 138 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 FGF6P10767 208 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 RAB4AP20338 218 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 AMN1Q8IY45 258 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 ISOC2Q96AB3 205 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 OSTCQ9NRP0 149 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 TMEM242Q9NWH2 141 aa6.5□□□□□ -1.37
PCDHGC3-207ENST00000622656 TRBV6-5A0A0K0K1A5 114 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 A0A1B0GUT8 65 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 NDUFS6O75380 124 aaKnown RBP6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 NCR2O95944 276 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 APCSP02743 223 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 ESDP10768 282 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 RPL23P62829 140 aaKnown RBP6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 HIGD2BQ4VC39 106 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 RNASEKQ6P5S7 137 aaKnown RBP6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 SMIM15Q7Z3B0 74 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 NUP35Q8NFH5 326 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 TMEM191AQ9H0A3 160 aa6.49□□□□□ -1.37
PCDHGC3-207ENST00000622656 PMCHP20382 165 aa6.48□□□□□ -1.37
PCDHGC3-207ENST00000622656 POLR2KP53803 58 aaKnown RBP6.48□□□□□ -1.37
PCDHGC3-207ENST00000622656 CNBPP62633 177 aaKnown RBP6.48□□□□□ -1.37
PCDHGC3-207ENST00000622656 AMMECR1LQ6DCA0 310 aa6.48□□□□□ -1.37
PCDHGC3-207ENST00000622656 CLRN3Q8NCR9 226 aa6.48□□□□□ -1.37
PCDHGC3-207ENST00000622656 CHCHD10Q8WYQ3 142 aaPredicted RBP6.48□□□□□ -1.37
PCDHGC3-207ENST00000622656 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 I3L3M4 83 aa6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 CIRBPQ14011 172 aaKnown RBP6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 ADIRFQ15847 76 aa6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 TMEM241Q24JQ0 296 aa6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 TEX261Q6UWH6 196 aa6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 NRACQ8N912 160 aa6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 ST20Q9HBF5 79 aa6.47□□□□□ -1.37
PCDHGC3-207ENST00000622656 J3QL48 77 aa6.46□□□□□ -1.38
PCDHGC3-207ENST00000622656 RPL37AP61513 92 aaKnown RBP6.46□□□□□ -1.38
PCDHGC3-207ENST00000622656 FOXI1Q12951 378 aa6.46□□□□□ -1.38
PCDHGC3-207ENST00000622656 BORCS7Q96B45 105 aa6.46□□□□□ -1.38
PCDHGC3-207ENST00000622656 LINC00526Q96FQ7 95 aa6.46□□□□□ -1.38
PCDHGC3-207ENST00000622656 TRBV27A0A0K0K1C4 114 aa6.45□□□□□ -1.38
PCDHGC3-207ENST00000622656 LINC00959A0A1B0GUT2 108 aa6.45□□□□□ -1.38
PCDHGC3-207ENST00000622656 H7C423 109 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms