RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 C9orf139Q6ZV77 190 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 RNF182Q8N6D2 247 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV7-81A0A0B4J1V7 117 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 KNCNA6PVL3 124 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHG2P01859 326 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 ZFP36P26651 326 aaKnown RBP5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 VMO1Q7Z5L0 202 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 MRPL53Q96EL3 112 aaKnown RBP5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 VSIG2Q96IQ7 327 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 C16orf92Q96LL3 132 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 ZFAND3Q9H8U3 227 aa5.56□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV3-66A0A0C4DH42 116 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 M0R1W7 72 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 DNAL4O96015 105 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 PRSS2P07478 247 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 BEAN1Q3B7T3 259 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV4OR15-8A0A075B7B6 117 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV3OR16-13A0A075B7E8 117 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 A0A087WW49 117 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV3-74A0A0B4J1X5 117 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 MGPP08493 103 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 C6orf226Q5I0X4 101 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 C11orf71Q6IPW1 123 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 GPHB5Q86YW7 130 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 LINC01561Q8N1V8 128 aa5.55□□□□□ -1.52
TRIM49B-202ENST00000622138 RBMY1BA6NDE4 496 aaKnown RBP5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 RBMY1EA6NEQ0 496 aaKnown RBP5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 FAM223BA6NKX1 122 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 CCL21O00585 134 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 VCYO14598 125 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 RBMY1DP0C7P1 496 aaKnown RBP5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 BAALC-AS2P0C853 105 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 RBMY1A1P0DJD3 496 aaKnown RBP5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 RBMY1CP0DJD4 496 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 POLR2KP53803 58 aaKnown RBP5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 ADORA2A-AS1P86434 159 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 RBMY1FQ15415 496 aaKnown RBP5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 FBXL19-AS1Q494R0 122 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 ATP5EP2Q5VTU8 51 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 Q8N9W7 124 aa5.54□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV3-49A0A0A0MS15 119 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 A0A1W2PPR1 153 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 CLPSL1A2RUU4 121 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 RPL39P62891 51 aaKnown RBP5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 ECSCRQ19T08 205 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 UBE2D4Q9Y2X8 147 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 LENEPQ9Y5L5 61 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 PRRC2AP48634 2157 aaKnown RBP5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 ATP6V0E1O15342 81 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 BCE1O60756 84 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 AVPP01185 164 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 C15orf32Q32M92 178 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 CCDC140Q96MF4 163 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
TRIM49B-202ENST00000622138 AKAP6Q13023 2319 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 IGKV3D-7A0A0C4DH55 119 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 G3V318 75 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 NXPH4O95158 308 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 GHRHP01286 108 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 FP248Q71RG6 208 aaPredicted RBP5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 WFDC11Q8NEX6 87 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 OVOL2Q9BRP0 275 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 SIRPDQ9H106 197 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 SPTBN1Q01082 2364 aaKnown RBP5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 TRBV6-5A0A0K0K1A5 114 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 TRBV27A0A0K0K1C4 114 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 XCL1P47992 114 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 S100A7L2Q5SY68 101 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 ADAMTSL4-AS1Q5T5F5 129 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 Q6ZSV7 163 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 FAM223AQ8IWN6 122 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 FAM110DQ8TAY7 271 aaPredicted RBP5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 XCL2Q9UBD3 114 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 NDUFA12Q9UI09 145 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 PHLDA3Q9Y5J5 127 aa5.52□□□□□ -1.53
TRIM49B-202ENST00000622138 ZFHX3Q15911 3703 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 A0A087WVE0 104 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 IGHV1-58A0A0C4DH39 117 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 H7BZZ5 65 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 NBL1P41271 181 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 CLEC19AQ6UXS0 136 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 COL6A6A6NMZ7 2263 aa5.51□□□□□ -1.53
TRIM49B-202ENST00000622138 CELSR1Q9NYQ6 3014 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 TRAV12-3A0A0B4J271 114 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 S100A4P26447 101 aaKnown RBP5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 PRR9Q5T870 116 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 MINOS1Q5TGZ0 78 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 MINOS1-NBL1R4GNA1 71 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 NACAE9PAV3 2078 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 TRAV21A0A0B4J279 112 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 IGF1P05019 195 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 RNASE4P34096 147 aaKnown RBP5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 ABCA2Q9BZC7 2435 aa5.5□□□□□ -1.53
TRIM49B-202ENST00000622138 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms