RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	POM121L12	Q8N7R1	296 aa		10.62	□□□□□ -0.71
SYNRG-231	ENST00000622045	VPREB3	Q9UKI3	123 aa		10.62	□□□□□ -0.71
SYNRG-231	ENST00000622045	IGHV4-61	A0A0C4DH41	118 aa		10.62	□□□□□ -0.71
SYNRG-231	ENST00000622045	UCN	P55089	124 aa		10.62	□□□□□ -0.71
SYNRG-231	ENST00000622045	C20orf203	Q8NBC4	194 aa		10.62	□□□□□ -0.71
SYNRG-231	ENST00000622045		H3BUA1	57 aa		10.61	□□□□□ -0.71
SYNRG-231	ENST00000622045		M0QY20	66 aa		10.61	□□□□□ -0.71
SYNRG-231	ENST00000622045	LINC01587	Q99440	93 aa		10.61	□□□□□ -0.71
SYNRG-231	ENST00000622045	IGHV3-16	A0A0C4DH30	117 aa		10.61	□□□□□ -0.71
SYNRG-231	ENST00000622045	LITAF	Q99732	161 aa		10.61	□□□□□ -0.71
SYNRG-231	ENST00000622045	TNFRSF18	Q9Y5U5	241 aa		10.61	□□□□□ -0.71
SYNRG-231	ENST00000622045	LY6D	Q14210	128 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	IGHV1OR15-1	A0A075B7D0	117 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	TRBV6-5	A0A0K0K1A5	114 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	DCANP1	Q8TF63	244 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	PIMREG	Q9BSJ6	248 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	KLK5	Q9Y337	293 aa	Predicted RBP	10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045		H3BT86	120 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	RHOH	Q15669	191 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	TMEM101	Q96IK0	257 aa		10.6	□□□□□ -0.71
SYNRG-231	ENST00000622045	C9orf153	Q5TBE3	101 aa		10.59	□□□□□ -0.71
SYNRG-231	ENST00000622045	ZNF625	Q96I27	306 aa	Predicted RBP	10.59	□□□□□ -0.71
SYNRG-231	ENST00000622045	LINC00694	P0DN24	101 aa		10.59	□□□□□ -0.71
SYNRG-231	ENST00000622045	LOC107984640	A0A0U1RRK4	108 aa		10.59	□□□□□ -0.71
SYNRG-231	ENST00000622045	LST1	O00453	97 aa		10.58	□□□□□ -0.72
SYNRG-231	ENST00000622045	MRPL23	Q16540	153 aa	Known RBP	10.58	□□□□□ -0.72
SYNRG-231	ENST00000622045	ZFHX3	Q15911	3703 aa		10.58	□□□□□ -0.72
SYNRG-231	ENST00000622045	USP9Y	O00507	2555 aa	Predicted RBP	10.58	□□□□□ -0.72
SYNRG-231	ENST00000622045		A6NDX4	124 aa		10.58	□□□□□ -0.72
SYNRG-231	ENST00000622045	PROK1	P58294	105 aa		10.58	□□□□□ -0.72
SYNRG-231	ENST00000622045	YAE1D1	Q9NRH1	226 aa		10.58	□□□□□ -0.72
SYNRG-231	ENST00000622045	NSUN5P1	Q3KNT7	163 aa		10.57	□□□□□ -0.72
SYNRG-231	ENST00000622045	C9orf85	Q96MD7	179 aa		10.57	□□□□□ -0.72
SYNRG-231	ENST00000622045	C19orf84	I3L1E1	186 aa		10.57	□□□□□ -0.72
SYNRG-231	ENST00000622045		K7EMT4	169 aa		10.57	□□□□□ -0.72
SYNRG-231	ENST00000622045	ABCA2	Q9BZC7	2435 aa		10.57	□□□□□ -0.72
SYNRG-231	ENST00000622045		A0A0J9YX75	114 aa		10.57	□□□□□ -0.72
SYNRG-231	ENST00000622045	KNCN	A6PVL3	124 aa		10.56	□□□□□ -0.72
SYNRG-231	ENST00000622045	RS1	O15537	224 aa		10.56	□□□□□ -0.72
SYNRG-231	ENST00000622045	MIA	Q16674	131 aa		10.56	□□□□□ -0.72
SYNRG-231	ENST00000622045	SYNJ2BP	P57105	145 aa		10.56	□□□□□ -0.72
SYNRG-231	ENST00000622045	TMEM61	Q8N0U2	210 aa		10.56	□□□□□ -0.72
SYNRG-231	ENST00000622045	IGLV1-40	P01703	118 aa		10.56	□□□□□ -0.72
SYNRG-231	ENST00000622045	ATP5J2	P56134	94 aa		10.56	□□□□□ -0.72
SYNRG-231	ENST00000622045	C10orf99	Q6UWK7	81 aa		10.55	□□□□□ -0.72
SYNRG-231	ENST00000622045	SMCR5	Q8TEV8	140 aa		10.55	□□□□□ -0.72
SYNRG-231	ENST00000622045		Q9UF83	564 aa		10.55	□□□□□ -0.72
SYNRG-231	ENST00000622045	C2CD3	Q4AC94	2353 aa		10.55	□□□□□ -0.72
SYNRG-231	ENST00000622045	NACA	E9PAV3	2078 aa		10.55	□□□□□ -0.72
SYNRG-231	ENST00000622045	IGHV1-58	A0A0C4DH39	117 aa		10.55	□□□□□ -0.72
SYNRG-231	ENST00000622045	TMEM126A	Q9H061	195 aa		10.55	□□□□□ -0.72
SYNRG-231	ENST00000622045	TRBV7-7	A0A0K0K1E9	115 aa		10.54	□□□□□ -0.72
SYNRG-231	ENST00000622045	CCL19	Q99731	98 aa		10.54	□□□□□ -0.72
SYNRG-231	ENST00000622045	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.54	□□□□□ -0.72
SYNRG-231	ENST00000622045	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.54	□□□□□ -0.72
SYNRG-231	ENST00000622045	PRM2	P04554	102 aa		10.54	□□□□□ -0.72
SYNRG-231	ENST00000622045	IGHV3-38	A0A0C4DH36	116 aa		10.52	□□□□□ -0.72
SYNRG-231	ENST00000622045	FAM240A	A0A1B0GVK7	77 aa		10.52	□□□□□ -0.72
SYNRG-231	ENST00000622045	VSIG2	Q96IQ7	327 aa		10.52	□□□□□ -0.72
SYNRG-231	ENST00000622045	MSMB	P08118	114 aa		10.52	□□□□□ -0.73
SYNRG-231	ENST00000622045	HERVK_113	P63121	156 aa		10.52	□□□□□ -0.73
SYNRG-231	ENST00000622045	SPANXD	Q9BXN6	97 aa		10.52	□□□□□ -0.73
SYNRG-231	ENST00000622045	SPANXC	Q9NY87	97 aa		10.52	□□□□□ -0.73
SYNRG-231	ENST00000622045	IGHV4-30-2	A0A087WSY4	118 aa		10.51	□□□□□ -0.73
SYNRG-231	ENST00000622045	LINC01600	Q96MT4	127 aa		10.51	□□□□□ -0.73
SYNRG-231	ENST00000622045		K7EQG2	157 aa		10.51	□□□□□ -0.73
SYNRG-231	ENST00000622045	FAM104A	Q969W3	186 aa		10.51	□□□□□ -0.73
SYNRG-231	ENST00000622045	IGHV4-59	P01825	116 aa		10.51	□□□□□ -0.73
SYNRG-231	ENST00000622045	GNLY	P22749	145 aa		10.51	□□□□□ -0.73
SYNRG-231	ENST00000622045	NDUFA7	O95182	113 aa		10.5	□□□□□ -0.73
SYNRG-231	ENST00000622045	MRPS36	P82909	103 aa	Known RBP	10.5	□□□□□ -0.73
SYNRG-231	ENST00000622045	C3orf22	Q8N5N4	141 aa		10.5	□□□□□ -0.73
SYNRG-231	ENST00000622045	SPANXA1	Q9NS26	97 aa		10.5	□□□□□ -0.73
SYNRG-231	ENST00000622045	DGAT2L7P	Q6IED9	249 aa		10.5	□□□□□ -0.73
SYNRG-231	ENST00000622045	C10orf105	Q8TEF2	133 aa		10.5	□□□□□ -0.73
SYNRG-231	ENST00000622045	CITED2	Q99967	270 aa	Predicted RBP	10.5	□□□□□ -0.73
SYNRG-231	ENST00000622045	MYO9A	B2RTY4	2548 aa		10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	DAZ2	Q13117	558 aa	Known RBP	10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	DAZ4	Q86SG3	579 aa	Known RBP	10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	EDA2R	Q9HAV5	297 aa		10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	DAZ3	Q9NR90	486 aa	Known RBP	10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	CDKN2A-AS1	Q9UH64	79 aa		10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	USP9X	Q93008	2570 aa	Predicted RBP	10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	DEFB121	Q5J5C9	76 aa		10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	GAGE2A	Q6NT46	116 aa		10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045		Q8N2B8	174 aa		10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	PSMB8	P28062	276 aa		10.49	□□□□□ -0.73
SYNRG-231	ENST00000622045	AVP	P01185	164 aa		10.48	□□□□□ -0.73
SYNRG-231	ENST00000622045	DEFB131A	P59861	70 aa		10.48	□□□□□ -0.73
SYNRG-231	ENST00000622045	HOXD3	P31249	432 aa	Predicted RBP	10.48	□□□□□ -0.73
SYNRG-231	ENST00000622045	BAALC-AS2	P0C853	105 aa		10.47	□□□□□ -0.73
SYNRG-231	ENST00000622045	CSDC2	Q9Y534	153 aa	Known RBP	10.47	□□□□□ -0.73
SYNRG-231	ENST00000622045	ACACB	O00763	2458 aa		10.47	□□□□□ -0.73
SYNRG-231	ENST00000622045		Q9H8V8	135 aa		10.47	□□□□□ -0.73
SYNRG-231	ENST00000622045		Q9HAA7	133 aa		10.47	□□□□□ -0.73
SYNRG-231	ENST00000622045	CFHR3	Q02985	330 aa		10.46	□□□□□ -0.73
SYNRG-231	ENST00000622045	DEFB112	Q30KQ8	113 aa		10.46	□□□□□ -0.73
SYNRG-231	ENST00000622045	LINC00643	Q86TS7	51 aa		10.46	□□□□□ -0.73
SYNRG-231	ENST00000622045	PYGO1	Q9Y3Y4	419 aa		10.46	□□□□□ -0.73
SYNRG-231	ENST00000622045		B4DSR2	109 aa		10.46	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms