RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 KIR2DL4Q99706 377 aa7.47□□□□□ -1.21
CPNE3-212ENST00000621783 TRAV26-1A0A087WT03 109 aa7.46□□□□□ -1.22
CPNE3-212ENST00000621783 A0A0J9YY99 117 aa7.46□□□□□ -1.22
CPNE3-212ENST00000621783 NHLRC4P0CG21 123 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-212ENST00000621783 ORMDL2Q53FV1 153 aa7.46□□□□□ -1.22
CPNE3-212ENST00000621783 NUDT3O95989 172 aa7.45□□□□□ -1.22
CPNE3-212ENST00000621783 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
CPNE3-212ENST00000621783 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-212ENST00000621783 COTL1Q14019 142 aa7.45□□□□□ -1.22
CPNE3-212ENST00000621783 LCE2AQ5TA79 106 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-212ENST00000621783 DAZ4Q86SG3 579 aaKnown RBP7.45□□□□□ -1.22
CPNE3-212ENST00000621783 DAZ3Q9NR90 486 aaKnown RBP7.45□□□□□ -1.22
CPNE3-212ENST00000621783 NBEAL1Q6ZS30 2694 aa7.45□□□□□ -1.22
CPNE3-212ENST00000621783 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
CPNE3-212ENST00000621783 LINC00173Q6ZV60 143 aa7.44□□□□□ -1.22
CPNE3-212ENST00000621783 OR10D4PQ8NGN7 298 aa7.44□□□□□ -1.22
CPNE3-212ENST00000621783 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
CPNE3-212ENST00000621783 TRAV10A0A0B4J240 114 aa7.43□□□□□ -1.22
CPNE3-212ENST00000621783 AKR1D1P51857 326 aa7.43□□□□□ -1.22
CPNE3-212ENST00000621783 C2orf66Q6UXQ4 117 aa7.43□□□□□ -1.22
CPNE3-212ENST00000621783 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
CPNE3-212ENST00000621783 CYSLTR1Q9Y271 337 aa7.43□□□□□ -1.22
CPNE3-212ENST00000621783 ICOSQ9Y6W8 199 aa7.43□□□□□ -1.22
CPNE3-212ENST00000621783 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 A0A096LPF7 62 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 C20orf203Q8NBC4 194 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 TOMM6Q96B49 74 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 HSPB8Q9UJY1 196 aa7.42□□□□□ -1.22
CPNE3-212ENST00000621783 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
CPNE3-212ENST00000621783 H3BNG1 76 aa7.41□□□□□ -1.22
CPNE3-212ENST00000621783 G0S2P27469 103 aa7.41□□□□□ -1.22
CPNE3-212ENST00000621783 KRTDAPP60985 99 aa7.41□□□□□ -1.22
CPNE3-212ENST00000621783 RPL39P62891 51 aaKnown RBP7.41□□□□□ -1.22
CPNE3-212ENST00000621783 MRPL23Q16540 153 aaKnown RBP7.41□□□□□ -1.22
CPNE3-212ENST00000621783 GTSF1LQ9H1H1 148 aa7.41□□□□□ -1.22
CPNE3-212ENST00000621783 TENM3Q9P273 2699 aa7.4□□□□□ -1.22
CPNE3-212ENST00000621783 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-212ENST00000621783 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-212ENST00000621783 C3orf79P0CE67 100 aa7.4□□□□□ -1.22
CPNE3-212ENST00000621783 TMEM97Q5BJF2 176 aa7.4□□□□□ -1.22
CPNE3-212ENST00000621783 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 TRBV6-8A0A0A6YYG3 113 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 ATP5LO75964 103 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 SH2D6Q7Z4S9 175 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 IFI27L1Q96BM0 104 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 SCGB3A1Q96QR1 104 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 TMEM243Q9BU79 118 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 MAP1LC3CQ9BXW4 147 aa7.39□□□□□ -1.23
CPNE3-212ENST00000621783 SYS1-DBNDD2H3BUS1 97 aa7.38□□□□□ -1.23
CPNE3-212ENST00000621783 ERASQ7Z444 233 aa7.38□□□□□ -1.23
CPNE3-212ENST00000621783 SPATA12Q7Z6I5 190 aa7.38□□□□□ -1.23
CPNE3-212ENST00000621783 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
CPNE3-212ENST00000621783 IGIPA6NJ69 53 aa7.37□□□□□ -1.23
CPNE3-212ENST00000621783 H0Y8G0 127 aa7.37□□□□□ -1.23
CPNE3-212ENST00000621783 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-212ENST00000621783 Q8N976 141 aa7.37□□□□□ -1.23
CPNE3-212ENST00000621783 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
CPNE3-212ENST00000621783 SPANXA1Q9NS26 97 aa7.37□□□□□ -1.23
CPNE3-212ENST00000621783 UBE2D4Q9Y2X8 147 aa7.37□□□□□ -1.23
CPNE3-212ENST00000621783 IGLV4-3A0A075B6K6 122 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 UBE2L6O14933 153 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 GAGE6Q13070 117 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 JOSD1Q15040 202 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-212ENST00000621783 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 CEMP1Q6PRD7 247 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-212ENST00000621783 C15orf53Q8NAA6 179 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 BAALCQ8WXS3 180 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 CHCHD5Q9BSY4 110 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 PYGO1Q9Y3Y4 419 aa7.36□□□□□ -1.23
CPNE3-212ENST00000621783 H7C423 109 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 FGF6P10767 208 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 TIRAPP58753 221 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 LELP1Q5T871 98 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 PET117Q6UWS5 81 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 Q6ZN92 141 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 Q6ZUT4 128 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
CPNE3-212ENST00000621783 OPRPNQ99935 248 aaPredicted RBP7.35□□□□□ -1.23
CPNE3-212ENST00000621783 TIMM21Q9BVV7 248 aa7.35□□□□□ -1.23
CPNE3-212ENST00000621783 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 C20orf202A1L168 122 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 IGLL5B9A064 214 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 SCGB1D1O95968 90 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 PRSS1P07477 247 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 NPSP0C0P6 89 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 SMIM6P0DI80 62 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 SMAGPQ0VAQ4 97 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 LINC01545Q5VT33 79 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
CPNE3-212ENST00000621783 TRAV12-1A0A0B4J245 112 aa7.33□□□□□ -1.24
CPNE3-212ENST00000621783 ZNF25P17030 456 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-212ENST00000621783 MRPS36P82909 103 aaKnown RBP7.33□□□□□ -1.24
CPNE3-212ENST00000621783 ODF1Q14990 250 aa7.33□□□□□ -1.24
CPNE3-212ENST00000621783 PMVKQ15126 192 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms