RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 RHOHQ15669 191 aa11.16□□□□□ -0.62
CBWD3-216ENST00000621396 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
CBWD3-216ENST00000621396 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.62
CBWD3-216ENST00000621396 VSIG2Q96IQ7 327 aa11.15□□□□□ -0.62
CBWD3-216ENST00000621396 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
CBWD3-216ENST00000621396 TRBV10-1A0A0K0K1A3 114 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 PAX4O43316 350 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 UBE2D3P61077 147 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 UBE2D2P62837 147 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 C11orf45Q8TAV5 145 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 ZMAT4Q9H898 229 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
CBWD3-216ENST00000621396 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-216ENST00000621396 C11orf68Q9H3H3 251 aaKnown RBP11.14□□□□□ -0.63
CBWD3-216ENST00000621396 RPL32P62910 135 aaKnown RBP11.13□□□□□ -0.63
CBWD3-216ENST00000621396 NTM-AS1Q6ZSK4 140 aa11.13□□□□□ -0.63
CBWD3-216ENST00000621396 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
CBWD3-216ENST00000621396 OPRPNQ99935 248 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-216ENST00000621396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-216ENST00000621396 IGKV2-29A2NJV5 120 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-216ENST00000621396 ZC2HC1BQ5TFG8 222 aa11.12□□□□□ -0.63
CBWD3-216ENST00000621396 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
CBWD3-216ENST00000621396 LYSTQ99698 3801 aa11.12□□□□□ -0.63
CBWD3-216ENST00000621396 CIDEAO60543 219 aa11.11□□□□□ -0.63
CBWD3-216ENST00000621396 COTL1Q14019 142 aa11.11□□□□□ -0.63
CBWD3-216ENST00000621396 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
CBWD3-216ENST00000621396 IFI27L1Q96BM0 104 aa11.11□□□□□ -0.63
CBWD3-216ENST00000621396 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
CBWD3-216ENST00000621396 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
CBWD3-216ENST00000621396 FBN3Q75N90 2809 aa11.11□□□□□ -0.63
CBWD3-216ENST00000621396 Q8N976 141 aa11.1□□□□□ -0.63
CBWD3-216ENST00000621396 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
CBWD3-216ENST00000621396 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
CBWD3-216ENST00000621396 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
CBWD3-216ENST00000621396 SYS1-DBNDD2H3BUS1 97 aa11.1□□□□□ -0.63
CBWD3-216ENST00000621396 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
CBWD3-216ENST00000621396 C12orf57Q99622 126 aa11.1□□□□□ -0.63
CBWD3-216ENST00000621396 MAP1LC3CQ9BXW4 147 aa11.1□□□□□ -0.63
CBWD3-216ENST00000621396 CYSLTR1Q9Y271 337 aa11.09□□□□□ -0.63
CBWD3-216ENST00000621396 LINC00694P0DN24 101 aa11.09□□□□□ -0.63
CBWD3-216ENST00000621396 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
CBWD3-216ENST00000621396 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
CBWD3-216ENST00000621396 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
CBWD3-216ENST00000621396 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
CBWD3-216ENST00000621396 K7EMI3 77 aa11.08□□□□□ -0.64
CBWD3-216ENST00000621396 TGP01266 2768 aa11.08□□□□□ -0.64
CBWD3-216ENST00000621396 PRSS1P07477 247 aa11.08□□□□□ -0.64
CBWD3-216ENST00000621396 TEX48A0A1B0GUV7 120 aa11.07□□□□□ -0.64
CBWD3-216ENST00000621396 LINC00518Q8N0U6 118 aa11.07□□□□□ -0.64
CBWD3-216ENST00000621396 ATP6V0E2Q8NHE4 81 aa11.07□□□□□ -0.64
CBWD3-216ENST00000621396 DEFB131BA0A096LNP1 70 aa11.07□□□□□ -0.64
CBWD3-216ENST00000621396 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
CBWD3-216ENST00000621396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
CBWD3-216ENST00000621396 MAJINQ3KP22 176 aa11.06□□□□□ -0.64
CBWD3-216ENST00000621396 ERASQ7Z444 233 aa11.05□□□□□ -0.64
CBWD3-216ENST00000621396 TCTAP57738 103 aa11.05□□□□□ -0.64
CBWD3-216ENST00000621396 TENM2Q9NT68 2774 aa11.04□□□□□ -0.64
CBWD3-216ENST00000621396 SMIM6P0DI80 62 aa11.04□□□□□ -0.64
CBWD3-216ENST00000621396 Q6ZN92 141 aa11.04□□□□□ -0.64
CBWD3-216ENST00000621396 BAALCQ8WXS3 180 aa11.04□□□□□ -0.64
CBWD3-216ENST00000621396 FAM104AQ969W3 186 aa11.04□□□□□ -0.64
CBWD3-216ENST00000621396 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
CBWD3-216ENST00000621396 ATP5LO75964 103 aa11.03□□□□□ -0.64
CBWD3-216ENST00000621396 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
CBWD3-216ENST00000621396 GAGE6Q13070 117 aa11.03□□□□□ -0.64
CBWD3-216ENST00000621396 PRSS29PA6NIE9 313 aa11.02□□□□□ -0.65
CBWD3-216ENST00000621396 CHCHD5Q9BSY4 110 aa11.02□□□□□ -0.65
CBWD3-216ENST00000621396 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
CBWD3-216ENST00000621396 Q8N3U1 123 aa11.01□□□□□ -0.65
CBWD3-216ENST00000621396 MRPL23Q16540 153 aaKnown RBP11.01□□□□□ -0.65
CBWD3-216ENST00000621396 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
CBWD3-216ENST00000621396 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
CBWD3-216ENST00000621396 IGLV4-3A0A075B6K6 122 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 FGF6P10767 208 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 ODF1Q14990 250 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 LINC01545Q5VT33 79 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 PET117Q6UWS5 81 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 TMEM243Q9BU79 118 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 Q6ZUT4 128 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 PAM16Q9Y3D7 125 aa11□□□□□ -0.65
CBWD3-216ENST00000621396 hDV102S1A0JD36 115 aa10.99□□□□□ -0.65
CBWD3-216ENST00000621396 UBE2L6O14933 153 aa10.99□□□□□ -0.65
CBWD3-216ENST00000621396 G0S2P27469 103 aa10.99□□□□□ -0.65
CBWD3-216ENST00000621396 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
CBWD3-216ENST00000621396 TMEM262E9PQX1 116 aa10.99□□□□□ -0.65
CBWD3-216ENST00000621396 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
CBWD3-216ENST00000621396 IGLV4-60A0A075B6I1 120 aa10.98□□□□□ -0.65
CBWD3-216ENST00000621396 IGLL5B9A064 214 aa10.98□□□□□ -0.65
CBWD3-216ENST00000621396 AMMECR1LQ6DCA0 310 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 STPG4Q8N801 248 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 CST9LQ9H4G1 147 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 TRAV10A0A0B4J240 114 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 IGKV3OR2-268A0A0C4DH90 116 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 TEX43Q6ZNM6 134 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 TMEM141Q96I45 108 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 VCX2Q9H322 139 aa10.97□□□□□ -0.65
CBWD3-216ENST00000621396 DNAH7Q8WXX0 4024 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms