RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 DEFB131AP59861 70 aa14.34□□□□□ -0.11
LAPTM4B-204ENST00000619747 SRSF9Q13242 221 aaKnown RBP eCLIP14.34□□□□□ -0.11
LAPTM4B-204ENST00000619747 SBSPONQ8IVN8 264 aa14.34□□□□□ -0.11
LAPTM4B-204ENST00000619747 TMEM61Q8N0U2 210 aa14.34□□□□□ -0.11
LAPTM4B-204ENST00000619747 RASL10AQ92737 203 aa14.34□□□□□ -0.11
LAPTM4B-204ENST00000619747 SMR3AQ99954 134 aa14.33□□□□□ -0.12
LAPTM4B-204ENST00000619747 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
LAPTM4B-204ENST00000619747 SCGB1C2P0DMR2 95 aa14.32□□□□□ -0.12
LAPTM4B-204ENST00000619747 UBE2D1P51668 147 aa14.32□□□□□ -0.12
LAPTM4B-204ENST00000619747 FAM74A4Q5TZK3 123 aa14.32□□□□□ -0.12
LAPTM4B-204ENST00000619747 Q8N8P6 123 aa14.32□□□□□ -0.12
LAPTM4B-204ENST00000619747 DPH3P1Q9H4G8 78 aa14.32□□□□□ -0.12
LAPTM4B-204ENST00000619747 CSDC2Q9Y534 153 aaKnown RBP14.32□□□□□ -0.12
LAPTM4B-204ENST00000619747 Q8N1Y9 231 aa14.31□□□□□ -0.12
LAPTM4B-204ENST00000619747 SLC25A20O43772 301 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 KRTAP1-1Q07627 177 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 SCGB1D4Q6XE38 83 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 PLEKHB2Q96CS7 222 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 C9JAW5 83 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 F5H697 171 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 LYRM7Q5U5X0 104 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 C15orf53Q8NAA6 179 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 CHCHD5Q9BSY4 110 aa14.3□□□□□ -0.12
LAPTM4B-204ENST00000619747 C4orf3Q8WVX3 66 aa14.29□□□□□ -0.12
LAPTM4B-204ENST00000619747 ANK3Q12955 4377 aaKnown RBP14.29□□□□□ -0.12
LAPTM4B-204ENST00000619747 LINC01546A6NGU7 62 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 LAGE3Q14657 143 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 DYNLRB2Q8TF09 96 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 CD28P10747 220 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 Q6Q795 121 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 NDUFA11Q86Y39 141 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 ODF3Q96PU9 254 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 OTOGQ6ZRI0 2925 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 LOC107984640A0A0U1RRK4 108 aa14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 SUMO2P61956 95 aaKnown RBP14.28□□□□□ -0.12
LAPTM4B-204ENST00000619747 PLNP26678 52 aa14.27□□□□□ -0.12
LAPTM4B-204ENST00000619747 TRPT1Q86TN4 253 aaKnown RBP14.27□□□□□ -0.12
LAPTM4B-204ENST00000619747 NTN5Q8WTR8 489 aaPredicted RBP14.27□□□□□ -0.12
LAPTM4B-204ENST00000619747 ZNF815PA8K554 130 aa14.27□□□□□ -0.13
LAPTM4B-204ENST00000619747 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.13
LAPTM4B-204ENST00000619747 LINC00694P0DN24 101 aa14.26□□□□□ -0.13
LAPTM4B-204ENST00000619747 C5orf47Q569G3 176 aa14.26□□□□□ -0.13
LAPTM4B-204ENST00000619747 PEMTQ9UBM1 199 aa14.26□□□□□ -0.13
LAPTM4B-204ENST00000619747 NACAE9PAV3 2078 aa14.26□□□□□ -0.13
LAPTM4B-204ENST00000619747 RBMY1A1P0DJD3 496 aaKnown RBP14.26□□□□□ -0.13
LAPTM4B-204ENST00000619747 RBMY1CP0DJD4 496 aa14.26□□□□□ -0.13
LAPTM4B-204ENST00000619747 RBMY1FQ15415 496 aaKnown RBP14.26□□□□□ -0.13
LAPTM4B-204ENST00000619747 IGHV3-16A0A0C4DH30 117 aa14.25□□□□□ -0.13
LAPTM4B-204ENST00000619747 LINC01587Q99440 93 aa14.25□□□□□ -0.13
LAPTM4B-204ENST00000619747 CITED2Q99967 270 aaPredicted RBP14.25□□□□□ -0.13
LAPTM4B-204ENST00000619747 C2CD3Q4AC94 2353 aa14.25□□□□□ -0.13
LAPTM4B-204ENST00000619747 IGHV1OR15-1A0A075B7D0 117 aa14.24□□□□□ -0.13
LAPTM4B-204ENST00000619747 PRADC1Q9BSG0 188 aa14.24□□□□□ -0.13
LAPTM4B-204ENST00000619747 TMEM126AQ9H061 195 aa14.24□□□□□ -0.13
LAPTM4B-204ENST00000619747 LINC00315P59091 139 aa14.24□□□□□ -0.13
LAPTM4B-204ENST00000619747 F8VRH5 84 aa14.23□□□□□ -0.13
LAPTM4B-204ENST00000619747 DUSP14O95147 198 aaKnown RBP14.23□□□□□ -0.13
LAPTM4B-204ENST00000619747 TMEM86BQ8N661 226 aa14.23□□□□□ -0.13
LAPTM4B-204ENST00000619747 TEX49A0A1B0GTD5 131 aa14.23□□□□□ -0.13
LAPTM4B-204ENST00000619747 MED14OSP0DP75 135 aa14.23□□□□□ -0.13
LAPTM4B-204ENST00000619747 SPXQ9BT56 116 aa14.23□□□□□ -0.13
LAPTM4B-204ENST00000619747 KIF25-AS1Q9Y6Z4 181 aa14.23□□□□□ -0.13
LAPTM4B-204ENST00000619747 H7C1H1 209 aa14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 TRAV8-4A0A0B4J246 113 aa14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 RBMY1BA6NDE4 496 aaKnown RBP14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 RBMY1EA6NEQ0 496 aaKnown RBP14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 RBMY1DP0C7P1 496 aaKnown RBP14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 CFC1BP0CG36 223 aa14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 CFC1P0CG37 223 aa14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 DEFB114Q30KQ6 69 aa14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 SUMO4Q6EEV6 95 aa14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 SPANXA1Q9NS26 97 aa14.22□□□□□ -0.13
LAPTM4B-204ENST00000619747 H3BMM0 161 aa14.21□□□□□ -0.13
LAPTM4B-204ENST00000619747 MRPL23Q16540 153 aaKnown RBP14.21□□□□□ -0.13
LAPTM4B-204ENST00000619747 ZNF876PQ49A33 203 aa14.21□□□□□ -0.13
LAPTM4B-204ENST00000619747 LINC01006Q8NI28 216 aa14.21□□□□□ -0.13
LAPTM4B-204ENST00000619747 IGHV3-73A0A0B4J1V6 119 aa14.21□□□□□ -0.14
LAPTM4B-204ENST00000619747 CCL24O00175 119 aa14.2□□□□□ -0.14
LAPTM4B-204ENST00000619747 ZNF56Q15929 161 aa14.2□□□□□ -0.14
LAPTM4B-204ENST00000619747 MAP6D1Q9H9H5 199 aa14.2□□□□□ -0.14
LAPTM4B-204ENST00000619747 TRAV2A0A0B4J234 112 aa14.19□□□□□ -0.14
LAPTM4B-204ENST00000619747 C10orf126Q8N4M7 172 aa14.19□□□□□ -0.14
LAPTM4B-204ENST00000619747 H7C2G1 150 aa14.19□□□□□ -0.14
LAPTM4B-204ENST00000619747 NXPH4O95158 308 aa14.19□□□□□ -0.14
LAPTM4B-204ENST00000619747 C9orf85Q96MD7 179 aa14.19□□□□□ -0.14
LAPTM4B-204ENST00000619747 DNAJC30Q96LL9 226 aa14.18□□□□□ -0.14
LAPTM4B-204ENST00000619747 SCGB3A1Q96QR1 104 aa14.18□□□□□ -0.14
LAPTM4B-204ENST00000619747 ZNF256Q9Y2P7 627 aaPredicted RBP14.18□□□□□ -0.14
LAPTM4B-204ENST00000619747 SMIM9A6NGZ8 99 aa14.17□□□□□ -0.14
LAPTM4B-204ENST00000619747 C2orf66Q6UXQ4 117 aa14.17□□□□□ -0.14
LAPTM4B-204ENST00000619747 IGHV3OR16-12A0A075B7B8 117 aa14.16□□□□□ -0.14
LAPTM4B-204ENST00000619747 PRO1854Q9UHT4 67 aa14.16□□□□□ -0.14
LAPTM4B-204ENST00000619747 CRYGDP07320 174 aa14.16□□□□□ -0.14
LAPTM4B-204ENST00000619747 XCL2Q9UBD3 114 aa14.16□□□□□ -0.14
LAPTM4B-204ENST00000619747 ORMDL2Q53FV1 153 aa14.15□□□□□ -0.14
LAPTM4B-204ENST00000619747 SDHAF1A6NFY7 115 aa14.15□□□□□ -0.14
LAPTM4B-204ENST00000619747 PROK1P58294 105 aa14.15□□□□□ -0.14
LAPTM4B-204ENST00000619747 FLNBO75369 2602 aaKnown RBP14.15□□□□□ -0.14
LAPTM4B-204ENST00000619747 VWFP04275 2813 aa14.14□□□□□ -0.15
LAPTM4B-204ENST00000619747 RPL39P62891 51 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms