RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 IGKV2D-26A0A0A0MRZ7 120 aa14.49□□□□□ -0.09
MMP28-207ENST00000619655 PLNP26678 52 aa14.49□□□□□ -0.09
MMP28-207ENST00000619655 EMP1P54849 157 aa14.49□□□□□ -0.09
MMP28-207ENST00000619655 BAHCC1Q9P281 2608 aa14.48□□□□□ -0.09
MMP28-207ENST00000619655 IGHV3-38A0A0C4DH36 116 aa14.48□□□□□ -0.09
MMP28-207ENST00000619655 FGF6P10767 208 aa14.48□□□□□ -0.09
MMP28-207ENST00000619655 RHOHQ15669 191 aa14.48□□□□□ -0.09
MMP28-207ENST00000619655 RNF151Q2KHN1 245 aa14.48□□□□□ -0.09
MMP28-207ENST00000619655 PHLDA1Q8WV24 401 aaPredicted RBP14.48□□□□□ -0.09
MMP28-207ENST00000619655 NBEAL2Q6ZNJ1 2754 aa14.48□□□□□ -0.09
MMP28-207ENST00000619655 GAGE12BA1L429 117 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 PLAC8L1A1L4L8 177 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 GAGE7O76087 117 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 GAGE12FP0CL80 117 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 GAGE12GP0CL81 117 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 GAGE12IP0CL82 117 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 OPRPNQ99935 248 aaPredicted RBP14.47□□□□□ -0.09
MMP28-207ENST00000619655 TTTY13Q9BZ97 58 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 CST9LQ9H4G1 147 aa14.47□□□□□ -0.09
MMP28-207ENST00000619655 C20orf203Q8NBC4 194 aa14.46□□□□□ -0.09
MMP28-207ENST00000619655 TRGV2A0A075B6R0 118 aa14.46□□□□□ -0.1
MMP28-207ENST00000619655 TIMM17AQ99595 171 aa14.46□□□□□ -0.1
MMP28-207ENST00000619655 LINC01549A6NIU2 74 aa14.45□□□□□ -0.1
MMP28-207ENST00000619655 DAZ2Q13117 558 aaKnown RBP14.45□□□□□ -0.1
MMP28-207ENST00000619655 BOD1L2Q8IYS8 172 aa14.45□□□□□ -0.1
MMP28-207ENST00000619655 TMEM141Q96I45 108 aa14.45□□□□□ -0.1
MMP28-207ENST00000619655 OCIAD2Q56VL3 154 aa14.44□□□□□ -0.1
MMP28-207ENST00000619655 PMVKQ15126 192 aa14.44□□□□□ -0.1
MMP28-207ENST00000619655 AMMECR1LQ6DCA0 310 aa14.44□□□□□ -0.1
MMP28-207ENST00000619655 FBN1P35555 2871 aaKnown RBP14.44□□□□□ -0.1
MMP28-207ENST00000619655 TRAV4A0A0B4J268 109 aa14.43□□□□□ -0.1
MMP28-207ENST00000619655 ZNRF2Q8NHG8 242 aa14.43□□□□□ -0.1
MMP28-207ENST00000619655 VPS25Q9BRG1 176 aa14.42□□□□□ -0.1
MMP28-207ENST00000619655 CYSRT1A8MQ03 144 aa14.42□□□□□ -0.1
MMP28-207ENST00000619655 KRTAP24-1Q3LI83 254 aa14.42□□□□□ -0.1
MMP28-207ENST00000619655 TMEM97Q5BJF2 176 aa14.42□□□□□ -0.1
MMP28-207ENST00000619655 TRAV8-6A0A0B4J262 113 aa14.41□□□□□ -0.1
MMP28-207ENST00000619655 CEMP1Q6PRD7 247 aaPredicted RBP14.41□□□□□ -0.1
MMP28-207ENST00000619655 DNAJC30Q96LL9 226 aa14.41□□□□□ -0.1
MMP28-207ENST00000619655 SLC25A29Q8N8R3 303 aa14.41□□□□□ -0.1
MMP28-207ENST00000619655 K7EQD1 137 aa14.4□□□□□ -0.1
MMP28-207ENST00000619655 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.4□□□□□ -0.11
MMP28-207ENST00000619655 IGKV2-29A2NJV5 120 aaPredicted RBP14.4□□□□□ -0.11
MMP28-207ENST00000619655 SEC11AP67812 179 aa14.4□□□□□ -0.11
MMP28-207ENST00000619655 IGLV4-69A0A075B6H9 119 aa14.39□□□□□ -0.11
MMP28-207ENST00000619655 SIVA1O15304 175 aa14.39□□□□□ -0.11
MMP28-207ENST00000619655 TRBV7-3A0A075B6L6 115 aa14.38□□□□□ -0.11
MMP28-207ENST00000619655 C11orf86A6NJI1 115 aa14.38□□□□□ -0.11
MMP28-207ENST00000619655 K7ERU9 68 aa14.38□□□□□ -0.11
MMP28-207ENST00000619655 OVOL2Q9BRP0 275 aa14.38□□□□□ -0.11
MMP28-207ENST00000619655 CHCHD7Q9BUK0 85 aa14.38□□□□□ -0.11
MMP28-207ENST00000619655 GAGE12JA6NER3 117 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 DEFB130BP0DP73 79 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 DEFB130AP0DP74 79 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 GAGE4Q13068 117 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 GAGE5Q13069 117 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 GAGE13Q4V321 117 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 RNASE13Q5GAN3 156 aaKnown RBP14.37□□□□□ -0.11
MMP28-207ENST00000619655 WFDC9Q8NEX5 89 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 IGLV4-3A0A075B6K6 122 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 RPL36AP83881 106 aaKnown RBP14.37□□□□□ -0.11
MMP28-207ENST00000619655 DEFB135Q30KP9 77 aa14.37□□□□□ -0.11
MMP28-207ENST00000619655 RPL36ALQ969Q0 106 aaKnown RBP14.37□□□□□ -0.11
MMP28-207ENST00000619655 VCX2Q9H322 139 aa14.36□□□□□ -0.11
MMP28-207ENST00000619655 STAB1Q9NY15 2570 aa14.36□□□□□ -0.11
MMP28-207ENST00000619655 TRGV4A0A0C4DH28 118 aa14.36□□□□□ -0.11
MMP28-207ENST00000619655 MAPKAPK5-AS1Q8N8E1 139 aa14.36□□□□□ -0.11
MMP28-207ENST00000619655 TMEM170BQ5T4T1 132 aa14.35□□□□□ -0.11
MMP28-207ENST00000619655 OR11H2Q8NH07 326 aa14.35□□□□□ -0.11
MMP28-207ENST00000619655 X6R8D5 127 aa14.35□□□□□ -0.11
MMP28-207ENST00000619655 LOC100131303A0A0U1RQF7 123 aa14.34□□□□□ -0.11
MMP28-207ENST00000619655 HSD52Q0P140 79 aa14.34□□□□□ -0.11
MMP28-207ENST00000619655 TRBV10-1A0A0K0K1A3 114 aa14.33□□□□□ -0.11
MMP28-207ENST00000619655 C3orf56Q8N813 242 aa14.33□□□□□ -0.11
MMP28-207ENST00000619655 PRADC1Q9BSG0 188 aa14.33□□□□□ -0.12
MMP28-207ENST00000619655 CHAC1Q9BUX1 264 aa14.33□□□□□ -0.12
MMP28-207ENST00000619655 TRBV25-1A0A075B6N4 114 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 OXLD1Q5BKU9 147 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 PAPPA-AS1Q5QFB9 102 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 UBE2D4Q9Y2X8 147 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 MAST4O15021 2626 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 A6NDN8 102 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 GAGE10A6NGK3 116 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 DEFB4AO15263 64 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 PYGO1Q9Y3Y4 419 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 PKD1L1Q8TDX9 2849 aa14.32□□□□□ -0.12
MMP28-207ENST00000619655 APOC4P55056 127 aa14.31□□□□□ -0.12
MMP28-207ENST00000619655 GTF2H5Q6ZYL4 71 aa14.31□□□□□ -0.12
MMP28-207ENST00000619655 E9PLD3 99 aa14.31□□□□□ -0.12
MMP28-207ENST00000619655 FAM104AQ969W3 186 aa14.31□□□□□ -0.12
MMP28-207ENST00000619655 A0A0J9YXV3 536 aa14.3□□□□□ -0.12
MMP28-207ENST00000619655 H3BRM9 83 aa14.3□□□□□ -0.12
MMP28-207ENST00000619655 UBE2D3P61077 147 aa14.3□□□□□ -0.12
MMP28-207ENST00000619655 UBE2D2P62837 147 aa14.3□□□□□ -0.12
MMP28-207ENST00000619655 C9orf118A6NHY6 69 aa14.3□□□□□ -0.12
MMP28-207ENST00000619655 DAZ4Q86SG3 579 aaKnown RBP14.29□□□□□ -0.12
MMP28-207ENST00000619655 DAZ3Q9NR90 486 aaKnown RBP14.29□□□□□ -0.12
MMP28-207ENST00000619655 IGHV4-30-4P0DP06 118 aa14.29□□□□□ -0.12
MMP28-207ENST00000619655 HERVK_113P61574 105 aa14.29□□□□□ -0.12
MMP28-207ENST00000619655 FHL2Q14192 279 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms