RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ELOBQ15370 118 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 MPV17L2Q567V2 206 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 CDPF1Q6NVV7 123 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 ENHOQ6UWT2 76 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 MAPKAPK5-AS1Q8N8E1 139 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 BORCS7Q96B45 105 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 RPL39LQ96EH5 51 aaKnown RBP5.48□□□□□ -1.53
NEK3-209ENST00000618856 MRAP2Q96G30 205 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 TMEM218A2RU14 115 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 PPP1R2P9O14990 202 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 NCR2O95944 276 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 POLR2KP53803 58 aaKnown RBP5.47□□□□□ -1.53
NEK3-209ENST00000618856 RBX1P62877 108 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 KCNIP4Q6PIL6 250 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 AMN1Q8IY45 258 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 NRACQ8N912 160 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 TM2D2Q9BX73 214 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 KLK12Q9UKR0 248 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 COX11Q9Y6N1 276 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 URGCP-MRPS24S4R325 110 aa5.47□□□□□ -1.53
NEK3-209ENST00000618856 TRBV24-1A0A075B6N3 115 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 TRBV27A0A0K0K1C4 114 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 LINC00862A6NCI5 91 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 SDHAF1A6NFY7 115 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 C16orf90A8MZG2 172 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 CDK2AP2O75956 126 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 RPS10P46783 165 aaKnown RBP5.46□□□□□ -1.54
NEK3-209ENST00000618856 Q0VG73 95 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 C10orf91Q5T1B1 145 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 ATP5L2Q7Z4Y8 100 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 Q8N814 137 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 Q8N976 141 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 C20orf203Q8NBC4 194 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 CHCHD5Q9BSY4 110 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 TMEM70Q9BUB7 260 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 Q9HAA7 133 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.54
NEK3-209ENST00000618856 TMEM262E9PQX1 116 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 H7C423 109 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 I3L3M4 83 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 TSHBP01222 138 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 ESDP10768 282 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 RPL32P62910 135 aaKnown RBP5.45□□□□□ -1.54
NEK3-209ENST00000618856 GAGE6Q13070 117 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 COTL1Q14019 142 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 WFDC2Q14508 124 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 MIAQ16674 131 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 MRPL51Q4U2R6 128 aaKnown RBP5.45□□□□□ -1.54
NEK3-209ENST00000618856 XP32Q5T750 250 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
NEK3-209ENST00000618856 TMEM243Q9BU79 118 aa5.45□□□□□ -1.54
NEK3-209ENST00000618856 IGLV4-60A0A075B6I1 120 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 PSCAO43653 123 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 PPP1R17O96001 155 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 MT-ND4LP03901 98 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 S100A8P05109 93 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 AMTP48728 403 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 HBBP68871 147 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 UBE2WQ96B02 151 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 RMI2Q96E14 147 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 IMMP2LQ96T52 175 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 SEC11CQ9BY50 192 aa5.44□□□□□ -1.54
NEK3-209ENST00000618856 SMKR1H3BMG3 65 aa5.43□□□□□ -1.54
NEK3-209ENST00000618856 EIF4EBP3O60516 100 aaPredicted RBP5.43□□□□□ -1.54
NEK3-209ENST00000618856 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
NEK3-209ENST00000618856 CAMPP49913 170 aa5.43□□□□□ -1.54
NEK3-209ENST00000618856 SUMO2P61956 95 aaKnown RBP5.43□□□□□ -1.54
NEK3-209ENST00000618856 MRPL54Q6P161 138 aaKnown RBP5.43□□□□□ -1.54
NEK3-209ENST00000618856 LINC00269Q8N2A0 174 aa5.43□□□□□ -1.54
NEK3-209ENST00000618856 C20orf78Q9BR46 151 aa5.43□□□□□ -1.54
NEK3-209ENST00000618856 KRTAP17-1Q9BYP8 105 aa5.43□□□□□ -1.54
NEK3-209ENST00000618856 ST20Q9HBF5 79 aa5.43□□□□□ -1.54
NEK3-209ENST00000618856 IGKV2D-24A0A075B6R9 120 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 TRAV8-4A0A0B4J246 113 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 PRSS47A8MTI9 375 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 F8W036 122 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 VCYO14598 125 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 PHOX2AO14813 284 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 APCSP02743 223 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 PPBPP02775 128 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 PMCHP20382 165 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 KRTAP10-1P60331 282 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 REG3AQ06141 175 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 MRPL52Q86TS9 123 aaKnown RBP5.42□□□□□ -1.54
NEK3-209ENST00000618856 COMMD7Q86VX2 200 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 C1orf43Q9BWL3 253 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 CTDSP1Q9GZU7 261 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 TMEM242Q9NWH2 141 aa5.42□□□□□ -1.54
NEK3-209ENST00000618856 CARHSP1Q9Y2V2 147 aaKnown RBP5.42□□□□□ -1.54
NEK3-209ENST00000618856 CRPP02741 224 aa5.41□□□□□ -1.54
NEK3-209ENST00000618856 FGF6P10767 208 aa5.41□□□□□ -1.54
NEK3-209ENST00000618856 ZNF25P17030 456 aaPredicted RBP5.41□□□□□ -1.54
NEK3-209ENST00000618856 FUSP35637 526 aaKnown RBP eCLIP5.41□□□□□ -1.54
NEK3-209ENST00000618856 DEFB104AQ8WTQ1 72 aa5.41□□□□□ -1.54
NEK3-209ENST00000618856 BAALCQ8WXS3 180 aa5.41□□□□□ -1.54
NEK3-209ENST00000618856 BTF3L4Q96K17 158 aa5.41□□□□□ -1.54
NEK3-209ENST00000618856 CSDC2Q9Y534 153 aaKnown RBP5.41□□□□□ -1.54
NEK3-209ENST00000618856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms