RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 FAM229AH3BQW9 127 aa14.3□□□□□ -0.12
TRAF4-217ENST00000618771 CT83Q5H943 113 aa14.3□□□□□ -0.12
TRAF4-217ENST00000618771 DEFB104AQ8WTQ1 72 aa14.3□□□□□ -0.12
TRAF4-217ENST00000618771 ZNF727A8MUV8 499 aa14.29□□□□□ -0.12
TRAF4-217ENST00000618771 COTL1Q14019 142 aa14.29□□□□□ -0.12
TRAF4-217ENST00000618771 LINC01551Q86U37 167 aa14.29□□□□□ -0.12
TRAF4-217ENST00000618771 USP17L23D6RBM5 183 aa14.28□□□□□ -0.12
TRAF4-217ENST00000618771 SRP19P09132 144 aaKnown RBP14.28□□□□□ -0.12
TRAF4-217ENST00000618771 AMTP48728 403 aa14.28□□□□□ -0.12
TRAF4-217ENST00000618771 FOXA3P55318 350 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-217ENST00000618771 C20orf203Q8NBC4 194 aa14.28□□□□□ -0.12
TRAF4-217ENST00000618771 A0A1B0GUV1 79 aa14.27□□□□□ -0.13
TRAF4-217ENST00000618771 UBE2L6O14933 153 aa14.27□□□□□ -0.13
TRAF4-217ENST00000618771 REG3AQ06141 175 aa14.27□□□□□ -0.13
TRAF4-217ENST00000618771 KRTAP26-1Q6PEX3 210 aa14.26□□□□□ -0.13
TRAF4-217ENST00000618771 BORCS7Q96B45 105 aa14.26□□□□□ -0.13
TRAF4-217ENST00000618771 RPL39LQ96EH5 51 aaKnown RBP14.26□□□□□ -0.13
TRAF4-217ENST00000618771 DNAH8Q96JB1 4490 aa14.26□□□□□ -0.13
TRAF4-217ENST00000618771 IGLV4-60A0A075B6I1 120 aa14.25□□□□□ -0.13
TRAF4-217ENST00000618771 TEX261Q6UWH6 196 aa14.25□□□□□ -0.13
TRAF4-217ENST00000618771 IGLV10-54A0A075B6I4 117 aa14.24□□□□□ -0.13
TRAF4-217ENST00000618771 TSKUQ8WUA8 353 aa14.24□□□□□ -0.13
TRAF4-217ENST00000618771 OSTCQ9NRP0 149 aa14.24□□□□□ -0.13
TRAF4-217ENST00000618771 HIGD1CA8MV81 97 aa14.23□□□□□ -0.13
TRAF4-217ENST00000618771 GFRA4Q9GZZ7 299 aa14.23□□□□□ -0.13
TRAF4-217ENST00000618771 TRAV8-4A0A0B4J246 113 aa14.22□□□□□ -0.13
TRAF4-217ENST00000618771 A0A1B0GUT8 65 aa14.22□□□□□ -0.13
TRAF4-217ENST00000618771 PRSS1P07477 247 aa14.22□□□□□ -0.13
TRAF4-217ENST00000618771 SCXQ7RTU7 201 aa14.22□□□□□ -0.13
TRAF4-217ENST00000618771 FAM231BA6NCW3 169 aa14.21□□□□□ -0.13
TRAF4-217ENST00000618771 NCR2O95944 276 aa14.21□□□□□ -0.13
TRAF4-217ENST00000618771 SDHAF1A6NFY7 115 aa14.2□□□□□ -0.14
TRAF4-217ENST00000618771 J3QL48 77 aa14.2□□□□□ -0.14
TRAF4-217ENST00000618771 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
TRAF4-217ENST00000618771 FAM74A3Q4VXF1 159 aa14.19□□□□□ -0.14
TRAF4-217ENST00000618771 LINC00528Q8N1L1 170 aa14.19□□□□□ -0.14
TRAF4-217ENST00000618771 CHAC1Q9BUX1 264 aa14.19□□□□□ -0.14
TRAF4-217ENST00000618771 APCSP02743 223 aa14.18□□□□□ -0.14
TRAF4-217ENST00000618771 ISOC2Q96AB3 205 aa14.18□□□□□ -0.14
TRAF4-217ENST00000618771 TMEM191AQ9H0A3 160 aa14.18□□□□□ -0.14
TRAF4-217ENST00000618771 V9GYV3 84 aa14.18□□□□□ -0.14
TRAF4-217ENST00000618771 TRBV6-5A0A0K0K1A5 114 aa14.17□□□□□ -0.14
TRAF4-217ENST00000618771 PLA2G1BP04054 148 aaKnown RBP14.17□□□□□ -0.14
TRAF4-217ENST00000618771 AMMECR1LQ6DCA0 310 aa14.17□□□□□ -0.14
TRAF4-217ENST00000618771 DGAT2L7PQ6IED9 249 aa14.17□□□□□ -0.14
TRAF4-217ENST00000618771 CLRN3Q8NCR9 226 aa14.17□□□□□ -0.14
TRAF4-217ENST00000618771 C9JQL5 133 aa14.16□□□□□ -0.14
TRAF4-217ENST00000618771 GAS8-AS1O95177 125 aa14.16□□□□□ -0.14
TRAF4-217ENST00000618771 RPL23P62829 140 aaKnown RBP14.16□□□□□ -0.14
TRAF4-217ENST00000618771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-217ENST00000618771 IGKV2-29A2NJV5 120 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-217ENST00000618771 H7C423 109 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 I3L3M4 83 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 PMCHP20382 165 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 ADIRFQ15847 76 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 RNASEKQ6P5S7 137 aaKnown RBP14.15□□□□□ -0.14
TRAF4-217ENST00000618771 NUP35Q8NFH5 326 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 CIRBP-AS1Q8TBR5 109 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 RNF185Q96GF1 192 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 ST20Q9HBF5 79 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 NAT8Q9UHE5 227 aa14.15□□□□□ -0.14
TRAF4-217ENST00000618771 IGKV3OR2-268A0A0C4DH90 116 aa14.14□□□□□ -0.15
TRAF4-217ENST00000618771 RIGQ13278 110 aa14.14□□□□□ -0.15
TRAF4-217ENST00000618771 PEA15Q15121 130 aa14.14□□□□□ -0.15
TRAF4-217ENST00000618771 AMN1Q8IY45 258 aa14.14□□□□□ -0.15
TRAF4-217ENST00000618771 C9orf163Q8N9P6 203 aa14.14□□□□□ -0.15
TRAF4-217ENST00000618771 MRAP2Q96G30 205 aa14.14□□□□□ -0.15
TRAF4-217ENST00000618771 FGF6P10767 208 aa14.13□□□□□ -0.15
TRAF4-217ENST00000618771 RAB4AP20338 218 aa14.13□□□□□ -0.15
TRAF4-217ENST00000618771 SRSF3P84103 164 aaKnown RBP14.13□□□□□ -0.15
TRAF4-217ENST00000618771 hDV102S1A0JD36 115 aa14.12□□□□□ -0.15
TRAF4-217ENST00000618771 RPS10P46783 165 aaKnown RBP14.12□□□□□ -0.15
TRAF4-217ENST00000618771 SMDT1Q9H4I9 107 aa14.12□□□□□ -0.15
TRAF4-217ENST00000618771 TMEM242Q9NWH2 141 aa14.12□□□□□ -0.15
TRAF4-217ENST00000618771 NAT8BQ9UHF3 227 aa14.12□□□□□ -0.15
TRAF4-217ENST00000618771 TSHBP01222 138 aa14.11□□□□□ -0.15
TRAF4-217ENST00000618771 GAGE12HA6NDE8 117 aa14.1□□□□□ -0.15
TRAF4-217ENST00000618771 ZNF25P17030 456 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-217ENST00000618771 CNBPP62633 177 aaKnown RBP14.1□□□□□ -0.15
TRAF4-217ENST00000618771 AP5S1Q9NUS5 200 aa14.1□□□□□ -0.15
TRAF4-217ENST00000618771 ESDP10768 282 aa14.09□□□□□ -0.15
TRAF4-217ENST00000618771 POLR2KP53803 58 aaKnown RBP14.09□□□□□ -0.15
TRAF4-217ENST00000618771 BTF3L4Q96K17 158 aa14.09□□□□□ -0.15
TRAF4-217ENST00000618771 TRBV27A0A0K0K1C4 114 aa14.08□□□□□ -0.16
TRAF4-217ENST00000618771 CHCHD10Q8WYQ3 142 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-217ENST00000618771 SMIM27A0A1W2PRY6 76 aa14.07□□□□□ -0.16
TRAF4-217ENST00000618771 SMKR1H3BMG3 65 aa14.07□□□□□ -0.16
TRAF4-217ENST00000618771 TMEM101Q96IK0 257 aa14.07□□□□□ -0.16
TRAF4-217ENST00000618771 PPP1R17O96001 155 aa14.06□□□□□ -0.16
TRAF4-217ENST00000618771 CFAP161Q6P656 301 aa14.06□□□□□ -0.16
TRAF4-217ENST00000618771 SDIM1Q6ZPB5 146 aa14.06□□□□□ -0.16
TRAF4-217ENST00000618771 C15orf56Q8N910 161 aa14.06□□□□□ -0.16
TRAF4-217ENST00000618771 OR5A1Q8NGJ0 315 aa14.06□□□□□ -0.16
TRAF4-217ENST00000618771 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-217ENST00000618771 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-217ENST00000618771 C7orf77A4D0Y5 90 aa14.04□□□□□ -0.16
TRAF4-217ENST00000618771 KRTAP29-1A8MX34 341 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-217ENST00000618771 SLPIP03973 132 aa14.04□□□□□ -0.16
TRAF4-217ENST00000618771 CAMPP49913 170 aa14.04□□□□□ -0.16
TRAF4-217ENST00000618771 SUMO2P61956 95 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms