RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 DSCAML1Q8TD84 2053 aa10.44□□□□□ -0.74
CIITA-213ENST00000618327 A0A096LPF7 62 aa10.44□□□□□ -0.74
CIITA-213ENST00000618327 ACYP1P07311 99 aa10.44□□□□□ -0.74
CIITA-213ENST00000618327 SMR3AQ99954 134 aa10.44□□□□□ -0.74
CIITA-213ENST00000618327 C18orf65Q6ZTR6 163 aa10.43□□□□□ -0.74
CIITA-213ENST00000618327 IGLV2-11P01706 119 aa10.43□□□□□ -0.74
CIITA-213ENST00000618327 RNASE13Q5GAN3 156 aaKnown RBP10.43□□□□□ -0.74
CIITA-213ENST00000618327 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
CIITA-213ENST00000618327 A0A0J9YY99 117 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 CRIP1P50238 77 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 ACANP16112 2415 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 FXYD2P54710 66 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 MRGPRG-AS1Q2M3A8 158 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 TAX1BP3O14907 124 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 DEFB135Q30KP9 77 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 ZFAND2AQ8N6M9 145 aa10.42□□□□□ -0.74
CIITA-213ENST00000618327 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
CIITA-213ENST00000618327 PSCAO43653 123 aa10.41□□□□□ -0.74
CIITA-213ENST00000618327 NKAPP1Q8N9T2 125 aa10.41□□□□□ -0.74
CIITA-213ENST00000618327 Q9H8V8 135 aa10.41□□□□□ -0.74
CIITA-213ENST00000618327 PRSS47A8MTI9 375 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 K7EQD1 137 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 ZMAT4Q9H898 229 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
CIITA-213ENST00000618327 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
CIITA-213ENST00000618327 A4D1N5 150 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 F8W735 103 aaPredicted RBP10.4□□□□□ -0.74
CIITA-213ENST00000618327 SZT2Q5T011 3432 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 TMEM263Q8WUH6 116 aaKnown RBP10.4□□□□□ -0.74
CIITA-213ENST00000618327 TP53TG3Q9ULZ0 132 aa10.4□□□□□ -0.74
CIITA-213ENST00000618327 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.75
CIITA-213ENST00000618327 ATP5G1P05496 136 aa10.39□□□□□ -0.75
CIITA-213ENST00000618327 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
CIITA-213ENST00000618327 HIGD1BQ9P298 99 aa10.38□□□□□ -0.75
CIITA-213ENST00000618327 GYPEP15421 78 aa10.38□□□□□ -0.75
CIITA-213ENST00000618327 ORMDL1Q9P0S3 153 aa10.38□□□□□ -0.75
CIITA-213ENST00000618327 FAM236AA0A1B0GUQ0 79 aa10.37□□□□□ -0.75
CIITA-213ENST00000618327 FAM236BA0A1B0GV22 79 aa10.37□□□□□ -0.75
CIITA-213ENST00000618327 MRPS12O15235 138 aaKnown RBP10.37□□□□□ -0.75
CIITA-213ENST00000618327 hADV29S1A0JD25 119 aa10.37□□□□□ -0.75
CIITA-213ENST00000618327 BRI3O95415 125 aa10.37□□□□□ -0.75
CIITA-213ENST00000618327 FOXI1Q12951 378 aa10.37□□□□□ -0.75
CIITA-213ENST00000618327 ZNF580Q9UK33 172 aa10.37□□□□□ -0.75
CIITA-213ENST00000618327 ATOX1O00244 68 aa10.37□□□□□ -0.75
CIITA-213ENST00000618327 DAZ2Q13117 558 aaKnown RBP10.37□□□□□ -0.75
CIITA-213ENST00000618327 DAZ4Q86SG3 579 aaKnown RBP10.37□□□□□ -0.75
CIITA-213ENST00000618327 DAZ3Q9NR90 486 aaKnown RBP10.37□□□□□ -0.75
CIITA-213ENST00000618327 XIRP2A4UGR9 3374 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
CIITA-213ENST00000618327 YPEL4Q96NS1 127 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 A0A1B0GX51 115 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 DCANP1Q8TF63 244 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 DEFB4AO15263 64 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 ATP6V0E2Q8NHE4 81 aa10.36□□□□□ -0.75
CIITA-213ENST00000618327 MUSTN1Q8IVN3 82 aa10.35□□□□□ -0.75
CIITA-213ENST00000618327 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
CIITA-213ENST00000618327 NDUFA7O95182 113 aa10.34□□□□□ -0.75
CIITA-213ENST00000618327 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
CIITA-213ENST00000618327 HERV-K104P63124 156 aa10.34□□□□□ -0.75
CIITA-213ENST00000618327 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
CIITA-213ENST00000618327 G3V4G9 280 aa10.34□□□□□ -0.75
CIITA-213ENST00000618327 H0YGX0 51 aa10.34□□□□□ -0.75
CIITA-213ENST00000618327 MRPL23Q16540 153 aaKnown RBP10.34□□□□□ -0.75
CIITA-213ENST00000618327 ESM1Q9NQ30 184 aa10.34□□□□□ -0.75
CIITA-213ENST00000618327 IGKV3D-7A0A0C4DH55 119 aa10.34□□□□□ -0.75
CIITA-213ENST00000618327 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
CIITA-213ENST00000618327 J3KT08 172 aa10.33□□□□□ -0.76
CIITA-213ENST00000618327 TET2Q6N021 2002 aaPredicted RBP10.33□□□□□ -0.76
CIITA-213ENST00000618327 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
CIITA-213ENST00000618327 SHISA2Q6UWI4 295 aa10.33□□□□□ -0.76
CIITA-213ENST00000618327 ICOSQ9Y6W8 199 aa10.33□□□□□ -0.76
CIITA-213ENST00000618327 EDN2P20800 178 aa10.33□□□□□ -0.76
CIITA-213ENST00000618327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
CIITA-213ENST00000618327 PRR9Q5T870 116 aa10.32□□□□□ -0.76
CIITA-213ENST00000618327 Q6ZTI0 123 aa10.32□□□□□ -0.76
CIITA-213ENST00000618327 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
CIITA-213ENST00000618327 XCL1P47992 114 aa10.32□□□□□ -0.76
CIITA-213ENST00000618327 Q6ZQT7 251 aa10.32□□□□□ -0.76
CIITA-213ENST00000618327 TOMM6Q96B49 74 aa10.31□□□□□ -0.76
CIITA-213ENST00000618327 SND1-IT1Q9HBX3 110 aa10.31□□□□□ -0.76
CIITA-213ENST00000618327 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
CIITA-213ENST00000618327 KLLNB2CW77 178 aa10.31□□□□□ -0.76
CIITA-213ENST00000618327 C5orf38Q86SI9 138 aa10.31□□□□□ -0.76
CIITA-213ENST00000618327 C5orf47Q569G3 176 aa10.31□□□□□ -0.76
CIITA-213ENST00000618327 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
CIITA-213ENST00000618327 E9PLD3 99 aa10.3□□□□□ -0.76
CIITA-213ENST00000618327 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
CIITA-213ENST00000618327 FLNBO75369 2602 aaKnown RBP10.3□□□□□ -0.76
CIITA-213ENST00000618327 H3BT86 120 aa10.29□□□□□ -0.76
CIITA-213ENST00000618327 PTH2Q96A98 100 aa10.29□□□□□ -0.76
CIITA-213ENST00000618327 WDFY4Q6ZS81 3184 aa10.29□□□□□ -0.76
CIITA-213ENST00000618327 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
CIITA-213ENST00000618327 ODF1Q14990 250 aa10.28□□□□□ -0.76
CIITA-213ENST00000618327 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms