RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 C16orf74Q96GX8 76 aa12.46□□□□□ -0.41
PCDHGC3-205ENST00000617641 ZNF479Q96JC4 524 aa12.46□□□□□ -0.41
PCDHGC3-205ENST00000617641 TIMM17AQ99595 171 aa12.46□□□□□ -0.41
PCDHGC3-205ENST00000617641 TEP1Q99973 2627 aaKnown RBP12.46□□□□□ -0.42
PCDHGC3-205ENST00000617641 TMEM141Q96I45 108 aa12.45□□□□□ -0.42
PCDHGC3-205ENST00000617641 MPV17L2Q567V2 206 aa12.45□□□□□ -0.42
PCDHGC3-205ENST00000617641 C20orf203Q8NBC4 194 aa12.45□□□□□ -0.42
PCDHGC3-205ENST00000617641 DAZ2Q13117 558 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-205ENST00000617641 ORAOV1Q8WV07 137 aa12.44□□□□□ -0.42
PCDHGC3-205ENST00000617641 TTTY13Q9BZ97 58 aa12.44□□□□□ -0.42
PCDHGC3-205ENST00000617641 RRN3P1Q2M238 152 aa12.44□□□□□ -0.42
PCDHGC3-205ENST00000617641 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-205ENST00000617641 UBE2V1Q13404 147 aa12.43□□□□□ -0.42
PCDHGC3-205ENST00000617641 PMVKQ15126 192 aa12.43□□□□□ -0.42
PCDHGC3-205ENST00000617641 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
PCDHGC3-205ENST00000617641 PHLDA1Q8WV24 401 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC3-205ENST00000617641 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
PCDHGC3-205ENST00000617641 IGHV3-38A0A0C4DH36 116 aa12.42□□□□□ -0.42
PCDHGC3-205ENST00000617641 EMP1P54849 157 aa12.42□□□□□ -0.42
PCDHGC3-205ENST00000617641 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
PCDHGC3-205ENST00000617641 GAGE12BA1L429 117 aa12.41□□□□□ -0.42
PCDHGC3-205ENST00000617641 GAGE7O76087 117 aa12.41□□□□□ -0.42
PCDHGC3-205ENST00000617641 GAGE12FP0CL80 117 aa12.41□□□□□ -0.42
PCDHGC3-205ENST00000617641 GAGE12GP0CL81 117 aa12.41□□□□□ -0.42
PCDHGC3-205ENST00000617641 GAGE12IP0CL82 117 aa12.41□□□□□ -0.42
PCDHGC3-205ENST00000617641 IGLV4-69A0A075B6H9 119 aa12.4□□□□□ -0.42
PCDHGC3-205ENST00000617641 BVES-AS1Q5T3Y7 98 aa12.4□□□□□ -0.42
PCDHGC3-205ENST00000617641 TRGV2A0A075B6R0 118 aa12.39□□□□□ -0.43
PCDHGC3-205ENST00000617641 C11orf86A6NJI1 115 aa12.39□□□□□ -0.43
PCDHGC3-205ENST00000617641 OVOL2Q9BRP0 275 aa12.39□□□□□ -0.43
PCDHGC3-205ENST00000617641 TRRAPQ9Y4A5 3859 aa12.39□□□□□ -0.43
PCDHGC3-205ENST00000617641 K7EQD1 137 aa12.38□□□□□ -0.43
PCDHGC3-205ENST00000617641 C12orf54Q6X4T0 127 aa12.38□□□□□ -0.43
PCDHGC3-205ENST00000617641 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
PCDHGC3-205ENST00000617641 CHCHD7Q9BUK0 85 aa12.38□□□□□ -0.43
PCDHGC3-205ENST00000617641 IGLV4-3A0A075B6K6 122 aa12.38□□□□□ -0.43
PCDHGC3-205ENST00000617641 TRAV8-6A0A0B4J262 113 aa12.38□□□□□ -0.43
PCDHGC3-205ENST00000617641 SIVA1O15304 175 aa12.37□□□□□ -0.43
PCDHGC3-205ENST00000617641 MAPKAPK5-AS1Q8N8E1 139 aa12.37□□□□□ -0.43
PCDHGC3-205ENST00000617641 SLC25A29Q8N8R3 303 aa12.37□□□□□ -0.43
PCDHGC3-205ENST00000617641 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
PCDHGC3-205ENST00000617641 CEMP1Q6PRD7 247 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-205ENST00000617641 WFDC9Q8NEX5 89 aa12.37□□□□□ -0.43
PCDHGC3-205ENST00000617641 KRTAP24-1Q3LI83 254 aa12.36□□□□□ -0.43
PCDHGC3-205ENST00000617641 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
PCDHGC3-205ENST00000617641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.36□□□□□ -0.43
PCDHGC3-205ENST00000617641 IGKV2-29A2NJV5 120 aaPredicted RBP12.36□□□□□ -0.43
PCDHGC3-205ENST00000617641 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
PCDHGC3-205ENST00000617641 TRBV10-1A0A0K0K1A3 114 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 CYSRT1A8MQ03 144 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 RPL36AP83881 106 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 OCIAD2Q56VL3 154 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 RPL36ALQ969Q0 106 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 PYGO1Q9Y3Y4 419 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 TRBV25-1A0A075B6N4 114 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 PAPPA-AS1Q5QFB9 102 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 OR11H2Q8NH07 326 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 VCX2Q9H322 139 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 X6R8D5 127 aa12.34□□□□□ -0.43
PCDHGC3-205ENST00000617641 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 E9PLD3 99 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 GAGE4Q13068 117 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 GAGE5Q13069 117 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 Q6ZVH6 145 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 PRADC1Q9BSG0 188 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 RNASE13Q5GAN3 156 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 UBE2D4Q9Y2X8 147 aa12.33□□□□□ -0.44
PCDHGC3-205ENST00000617641 HSD52Q0P140 79 aa12.32□□□□□ -0.44
PCDHGC3-205ENST00000617641 TMEM170BQ5T4T1 132 aa12.32□□□□□ -0.44
PCDHGC3-205ENST00000617641 CHAC1Q9BUX1 264 aa12.32□□□□□ -0.44
PCDHGC3-205ENST00000617641 TRGV4A0A0C4DH28 118 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 LOC100131303A0A0U1RQF7 123 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 UBE2D3P61077 147 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 UBE2D2P62837 147 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 DEFB130BP0DP73 79 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 DEFB130AP0DP74 79 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 DEFB135Q30KP9 77 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 AMELXQ99217 191 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
PCDHGC3-205ENST00000617641 A0A0J9YXV3 536 aa12.3□□□□□ -0.44
PCDHGC3-205ENST00000617641 WIPF1O43516 503 aa12.3□□□□□ -0.44
PCDHGC3-205ENST00000617641 FHL2Q14192 279 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 FBN1P35555 2871 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 NBEAL2Q6ZNJ1 2754 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 HERVK_113P61574 105 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 NTM-AS1Q6ZSK4 140 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 Q6ZUT4 128 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 DAZ4Q86SG3 579 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 KIR2DL5BQ8NHK3 375 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 COX11Q9Y6N1 276 aa12.29□□□□□ -0.44
PCDHGC3-205ENST00000617641 SMIM9A6NGZ8 99 aa12.28□□□□□ -0.44
PCDHGC3-205ENST00000617641 APOC4P55056 127 aa12.28□□□□□ -0.44
PCDHGC3-205ENST00000617641 BAHCC1Q9P281 2608 aa12.28□□□□□ -0.44
PCDHGC3-205ENST00000617641 K7ERU9 68 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms