RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 FAM110AQ9BQ89 295 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 TNFRSF18Q9Y5U5 241 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 TRBV27A0A0K0K1C4 114 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 LOC100131303A0A0U1RQF7 123 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 TSHBP01222 138 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 SPXQ9BT56 116 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 KRTAP10-11P60412 298 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 WFDC9Q8NEX5 89 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 ZNRF2Q8NHG8 242 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 HSBP1L1C9JCN9 74 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 PPP1R17O96001 155 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 PRB2P02812 416 aaPredicted RBP5.56□□□□□ -1.52
NEK3-207ENST00000617054 LGALS9BQ3B8N2 356 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 LGALS9CQ6DKI2 356 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 SLC25A29Q8N8R3 303 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 IL17DQ8TAD2 202 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 LINC00467Q9BRT7 94 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 C1QTNF4Q9BXJ3 329 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 I3L3M4 83 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 RS1O15537 224 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 NMUP48645 174 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 Q6ZVH6 145 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 BAALCQ8WXS3 180 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.56□□□□□ -1.52
NEK3-207ENST00000617054 IGKV2D-26A0A0A0MRZ7 120 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 IGKV2-29A2NJV5 120 aaPredicted RBP5.56□□□□□ -1.52
NEK3-207ENST00000617054 PCP2Q8IVA1 136 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 HHLA3Q9XRX5 114 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 CYSLTR1Q9Y271 337 aa5.56□□□□□ -1.52
NEK3-207ENST00000617054 TRBV6-5A0A0K0K1A5 114 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 GAGE12JA6NER3 117 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 ATP5LO75964 103 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 IGHV4-30-4P0DP06 118 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 GAGE1Q13065 139 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 GAGE4Q13068 117 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 GAGE5Q13069 117 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 GAGE13Q4V321 117 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 C16orf74Q96GX8 76 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 C12orf54Q6X4T0 127 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 UQCR10Q9UDW1 63 aa5.55□□□□□ -1.52
NEK3-207ENST00000617054 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
NEK3-207ENST00000617054 G3V4G9 280 aa5.54□□□□□ -1.52
NEK3-207ENST00000617054 IGKCP01834 107 aa5.54□□□□□ -1.52
NEK3-207ENST00000617054 SMCPP49901 116 aaPredicted RBP5.54□□□□□ -1.52
NEK3-207ENST00000617054 HNRNPA3P51991 378 aaKnown RBP5.54□□□□□ -1.52
NEK3-207ENST00000617054 H7C1H1 209 aa5.54□□□□□ -1.52
NEK3-207ENST00000617054 M0R143 59 aa5.54□□□□□ -1.52
NEK3-207ENST00000617054 HINT1P49773 126 aaPredicted RBP5.54□□□□□ -1.52
NEK3-207ENST00000617054 DAZ2Q13117 558 aaKnown RBP5.54□□□□□ -1.52
NEK3-207ENST00000617054 OR11H2Q8NH07 326 aa5.54□□□□□ -1.52
NEK3-207ENST00000617054 A0A087WX48 190 aa5.54□□□□□ -1.52
NEK3-207ENST00000617054 CHTOPQ9Y3Y2 248 aaKnown RBP5.54□□□□□ -1.52
NEK3-207ENST00000617054 A0A096LPF7 62 aa5.53□□□□□ -1.52
NEK3-207ENST00000617054 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
NEK3-207ENST00000617054 TRGV4A0A0C4DH28 118 aa5.53□□□□□ -1.52
NEK3-207ENST00000617054 DPM2O94777 84 aa5.53□□□□□ -1.52
NEK3-207ENST00000617054 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
NEK3-207ENST00000617054 RETNQ9HD89 108 aa5.53□□□□□ -1.52
NEK3-207ENST00000617054 TRAV4A0A0B4J268 109 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 RHODO00212 210 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 FAM222AQ5U5X8 452 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 SLC25A34Q6PIV7 304 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 TRBV7-3A0A075B6L6 115 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 TRAV8-6A0A0B4J262 113 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 K7EQD1 137 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 ZNF25P17030 456 aaPredicted RBP5.52□□□□□ -1.53
NEK3-207ENST00000617054 RPL32P62910 135 aaKnown RBP5.52□□□□□ -1.53
NEK3-207ENST00000617054 SPATA25Q9BR10 227 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 K7EMI3 77 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 NPSP0C0P6 89 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 LINC00694P0DN24 101 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 PIK3CD-AS1Q5SR53 167 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
NEK3-207ENST00000617054 NTM-AS1Q6ZSK4 140 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 FAM104AQ969W3 186 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 PTH2Q96A98 100 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 CST9LQ9H4G1 147 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 CELA1Q9UNI1 258 aa5.52□□□□□ -1.53
NEK3-207ENST00000617054 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 IGHV4-28A0A0C4DH34 117 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 F8VRH5 84 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 FHL2Q14192 279 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 MPV17L2Q567V2 206 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 OVOL2Q9BRP0 275 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 DNAH3Q8TD57 4116 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 C11orf86A6NJI1 115 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 COX8AP10176 69 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 MAPKAPK5-AS1Q8N8E1 139 aa5.51□□□□□ -1.53
NEK3-207ENST00000617054 IGLV4-69A0A075B6H9 119 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 A0A0J9YY99 117 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 FGF6P10767 208 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 COTL1Q14019 142 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 IGLV4-3A0A075B6K6 122 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 HTN3P15516 51 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 RPL36AP83881 106 aaKnown RBP5.5□□□□□ -1.53
NEK3-207ENST00000617054 PMVKQ15126 192 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 RPL36ALQ969Q0 106 aaKnown RBP5.5□□□□□ -1.53
NEK3-207ENST00000617054 A0A0J9YXV3 536 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 APOC4P55056 127 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms