RNA–Protein interactions for RNA: ENST00000615093.1

RAB43-208, Transcript of RAB43, member RAS oncogene family, human

TSL 5 BASIC

Gene RAB43, Length 783 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB43-208	ENST00000615093	PRSS1	P07477	247 aa		14.01	□□□□□ -0.17
RAB43-208	ENST00000615093	FAM231D	Q6ZW35	169 aa		14.01	□□□□□ -0.17
RAB43-208	ENST00000615093	GATD1	Q8NB37	220 aa		14.01	□□□□□ -0.17
RAB43-208	ENST00000615093	DEFB104A	Q8WTQ1	72 aa		14.01	□□□□□ -0.17
RAB43-208	ENST00000615093	IGLV4-60	A0A075B6I1	120 aa		14	□□□□□ -0.17
RAB43-208	ENST00000615093	COTL1	Q14019	142 aa		14	□□□□□ -0.17
RAB43-208	ENST00000615093	TRAV26-2	A0A0B4J265	109 aa		13.99	□□□□□ -0.17
RAB43-208	ENST00000615093	CIRBP-AS1	Q8TBR5	109 aa		13.99	□□□□□ -0.17
RAB43-208	ENST00000615093	GFRA4	Q9GZZ7	299 aa		13.99	□□□□□ -0.17
RAB43-208	ENST00000615093	IGLV10-54	A0A075B6I4	117 aa		13.98	□□□□□ -0.17
RAB43-208	ENST00000615093	TRAV8-4	A0A0B4J246	113 aa		13.98	□□□□□ -0.17
RAB43-208	ENST00000615093	AMT	P48728	403 aa		13.98	□□□□□ -0.17
RAB43-208	ENST00000615093	DGAT2L7P	Q6IED9	249 aa		13.98	□□□□□ -0.17
RAB43-208	ENST00000615093		A8MWL6	223 aa		13.97	□□□□□ -0.17
RAB43-208	ENST00000615093	NDUFS6	O75380	124 aa	Known RBP	13.97	□□□□□ -0.17
RAB43-208	ENST00000615093	CEBPG	P53567	150 aa		13.97	□□□□□ -0.17
RAB43-208	ENST00000615093	FOXA3	P55318	350 aa	Predicted RBP	13.97	□□□□□ -0.17
RAB43-208	ENST00000615093	SMIM15	Q7Z3B0	74 aa		13.97	□□□□□ -0.17
RAB43-208	ENST00000615093	UBE2L6	O14933	153 aa		13.96	□□□□□ -0.17
RAB43-208	ENST00000615093	CT83	Q5H943	113 aa		13.96	□□□□□ -0.17
RAB43-208	ENST00000615093	C9orf163	Q8N9P6	203 aa		13.95	□□□□□ -0.18
RAB43-208	ENST00000615093	RPL39L	Q96EH5	51 aa	Known RBP	13.95	□□□□□ -0.18
RAB43-208	ENST00000615093	EIF5A2	Q9GZV4	153 aa	Known RBP	13.95	□□□□□ -0.18
RAB43-208	ENST00000615093	TEX261	Q6UWH6	196 aa		13.94	□□□□□ -0.18
RAB43-208	ENST00000615093	CLRN3	Q8NCR9	226 aa		13.94	□□□□□ -0.18
RAB43-208	ENST00000615093	FAM210A	Q96ND0	272 aa		13.94	□□□□□ -0.18
RAB43-208	ENST00000615093	SMIM7	Q9BQ49	75 aa		13.94	□□□□□ -0.18
RAB43-208	ENST00000615093	NCR2	O95944	276 aa		13.92	□□□□□ -0.18
RAB43-208	ENST00000615093	KRTAP10-4	P60372	401 aa	Predicted RBP	13.92	□□□□□ -0.18
RAB43-208	ENST00000615093	LINC01551	Q86U37	167 aa		13.92	□□□□□ -0.18
RAB43-208	ENST00000615093	SDHAF1	A6NFY7	115 aa		13.91	□□□□□ -0.18
RAB43-208	ENST00000615093	SRP19	P09132	144 aa	Known RBP	13.91	□□□□□ -0.18
RAB43-208	ENST00000615093	ZNF727	A8MUV8	499 aa		13.89	□□□□□ -0.19
RAB43-208	ENST00000615093	CNBP	P62633	177 aa	Known RBP	13.89	□□□□□ -0.19
RAB43-208	ENST00000615093	TSKU	Q8WUA8	353 aa		13.89	□□□□□ -0.19
RAB43-208	ENST00000615093	BORCS7	Q96B45	105 aa		13.89	□□□□□ -0.19
RAB43-208	ENST00000615093	OSTC	Q9NRP0	149 aa		13.89	□□□□□ -0.19
RAB43-208	ENST00000615093	TRBV6-5	A0A0K0K1A5	114 aa		13.88	□□□□□ -0.19
RAB43-208	ENST00000615093		A0A1B0GUT8	65 aa		13.88	□□□□□ -0.19
RAB43-208	ENST00000615093		A0A1B0GVG6	124 aa		13.88	□□□□□ -0.19
RAB43-208	ENST00000615093	hDV102S1	A0JD36	115 aa		13.88	□□□□□ -0.19
RAB43-208	ENST00000615093	HIGD1C	A8MV81	97 aa		13.88	□□□□□ -0.19
RAB43-208	ENST00000615093	APCS	P02743	223 aa		13.88	□□□□□ -0.19
RAB43-208	ENST00000615093	SDIM1	Q6ZPB5	146 aa		13.88	□□□□□ -0.19
RAB43-208	ENST00000615093	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB43-208	ENST00000615093	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB43-208	ENST00000615093	FAM231B	A6NCW3	169 aa		13.87	□□□□□ -0.19
RAB43-208	ENST00000615093		H7C423	109 aa		13.87	□□□□□ -0.19
RAB43-208	ENST00000615093	AMMECR1L	Q6DCA0	310 aa		13.87	□□□□□ -0.19
RAB43-208	ENST00000615093	TMEM191A	Q9H0A3	160 aa		13.87	□□□□□ -0.19
RAB43-208	ENST00000615093	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB43-208	ENST00000615093	GAGE12H	A6NDE8	117 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	PANO1	I0J062	215 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093		I3L3M4	83 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093		J3QL48	77 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	GAS8-AS1	O95177	125 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	FGF6	P10767	208 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	PMCH	P20382	165 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	RNASEK	Q6P5S7	137 aa	Known RBP	13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	AP5S1	Q9NUS5	200 aa		13.85	□□□□□ -0.19
RAB43-208	ENST00000615093	IGKV3OR2-268	A0A0C4DH90	116 aa		13.84	□□□□□ -0.19
RAB43-208	ENST00000615093	SLPI	P03973	132 aa		13.84	□□□□□ -0.19
RAB43-208	ENST00000615093	RNF185	Q96GF1	192 aa		13.84	□□□□□ -0.19
RAB43-208	ENST00000615093		V9GYV3	84 aa		13.84	□□□□□ -0.19
RAB43-208	ENST00000615093	C15orf56	Q8N910	161 aa		13.83	□□□□□ -0.2
RAB43-208	ENST00000615093	ST20	Q9HBF5	79 aa		13.83	□□□□□ -0.2
RAB43-208	ENST00000615093	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.82	□□□□□ -0.2
RAB43-208	ENST00000615093	ESD	P10768	282 aa		13.82	□□□□□ -0.2
RAB43-208	ENST00000615093	ZNF25	P17030	456 aa	Predicted RBP	13.82	□□□□□ -0.2
RAB43-208	ENST00000615093	RAB4A	P20338	218 aa		13.82	□□□□□ -0.2
RAB43-208	ENST00000615093	ISOC2	Q96AB3	205 aa		13.82	□□□□□ -0.2
RAB43-208	ENST00000615093	TSHB	P01222	138 aa		13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	POLR2K	P53803	58 aa	Known RBP	13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	CIRBP	Q14011	172 aa	Known RBP	13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	TMEM241	Q24JQ0	296 aa		13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	FAM74A3	Q4VXF1	159 aa		13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	CFAP161	Q6P656	301 aa		13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	MRAP2	Q96G30	205 aa		13.81	□□□□□ -0.2
RAB43-208	ENST00000615093	IGHV3-64	A0A075B6Q5	118 aa		13.8	□□□□□ -0.2
RAB43-208	ENST00000615093	RPS10	P46783	165 aa	Known RBP	13.8	□□□□□ -0.2
RAB43-208	ENST00000615093	RPL37A	P61513	92 aa	Known RBP	13.8	□□□□□ -0.2
RAB43-208	ENST00000615093	AMN1	Q8IY45	258 aa		13.8	□□□□□ -0.2
RAB43-208	ENST00000615093	NUP35	Q8NFH5	326 aa		13.8	□□□□□ -0.2
RAB43-208	ENST00000615093	TMEM242	Q9NWH2	141 aa		13.8	□□□□□ -0.2
RAB43-208	ENST00000615093	RPL23	P62829	140 aa	Known RBP	13.79	□□□□□ -0.2
RAB43-208	ENST00000615093	RIG	Q13278	110 aa		13.79	□□□□□ -0.2
RAB43-208	ENST00000615093	OR5A1	Q8NGJ0	315 aa		13.79	□□□□□ -0.2
RAB43-208	ENST00000615093	PKHD1L1	Q86WI1	4243 aa		13.78	□□□□□ -0.2
RAB43-208	ENST00000615093	LRP1	Q07954	4544 aa	Known RBP	13.78	□□□□□ -0.2
RAB43-208	ENST00000615093	TRBV27	A0A0K0K1C4	114 aa		13.78	□□□□□ -0.2
RAB43-208	ENST00000615093		C9JQL5	133 aa		13.78	□□□□□ -0.2
RAB43-208	ENST00000615093	TMEM101	Q96IK0	257 aa		13.78	□□□□□ -0.2
RAB43-208	ENST00000615093	BTF3L4	Q96K17	158 aa		13.78	□□□□□ -0.2
RAB43-208	ENST00000615093	FOXI1	Q12951	378 aa		13.76	□□□□□ -0.21
RAB43-208	ENST00000615093	ADIRF	Q15847	76 aa		13.76	□□□□□ -0.21
RAB43-208	ENST00000615093	MRPL52	Q86TS9	123 aa	Known RBP	13.76	□□□□□ -0.21
RAB43-208	ENST00000615093	NAT8	Q9UHE5	227 aa		13.76	□□□□□ -0.21
RAB43-208	ENST00000615093	NAT8B	Q9UHF3	227 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms