RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
FAM3A-221ENST00000612856 LINC00574Q9H8X3 128 aa8.22□□□□□ -1.09
FAM3A-221ENST00000612856 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
FAM3A-221ENST00000612856 RS1O15537 224 aa8.21□□□□□ -1.09
FAM3A-221ENST00000612856 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.09
FAM3A-221ENST00000612856 F8VRH5 84 aa8.21□□□□□ -1.09
FAM3A-221ENST00000612856 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.09
FAM3A-221ENST00000612856 NF1P21359 2839 aa8.21□□□□□ -1.1
FAM3A-221ENST00000612856 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.1
FAM3A-221ENST00000612856 TRGV11A0A075B6L2 103 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
FAM3A-221ENST00000612856 COX6CP09669 75 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 CFAP126Q5VTH2 177 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 TAL2Q16559 108 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 Q8N8P6 123 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 WI2-2373I1.2A0A1W2PRP0 233 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 THAP8Q8NA92 274 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
FAM3A-221ENST00000612856 IGF1P05019 195 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 Q6ZQT7 251 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 PRO1854Q9UHT4 67 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 ADARB2-AS1A8MUL3 147 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 RNASE1P07998 156 aaKnown RBP8.19□□□□□ -1.1
FAM3A-221ENST00000612856 MYCNOSP40205 109 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 C2orf66Q6UXQ4 117 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 EDA2RQ9HAV5 297 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
FAM3A-221ENST00000612856 TRAV8-3A0A0A6YYJ7 113 aa8.18□□□□□ -1.1
FAM3A-221ENST00000612856 TEX49A0A1B0GTD5 131 aa8.18□□□□□ -1.1
FAM3A-221ENST00000612856 IGHV1OR15-1A0A075B7D0 117 aa8.18□□□□□ -1.1
FAM3A-221ENST00000612856 ZNF80P51504 273 aaPredicted RBP8.18□□□□□ -1.1
FAM3A-221ENST00000612856 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
FAM3A-221ENST00000612856 CRLF1O75462 422 aa8.18□□□□□ -1.1
FAM3A-221ENST00000612856 Q9HAA7 133 aa8.18□□□□□ -1.1
FAM3A-221ENST00000612856 PPP1R17O96001 155 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 IGLV2-11P01706 119 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 IGHG4P01861 327 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
FAM3A-221ENST00000612856 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
FAM3A-221ENST00000612856 PMVKQ15126 192 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
FAM3A-221ENST00000612856 TMEM101Q96IK0 257 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 M0QXV9 152 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 CRYGCP07315 174 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 PDE6HQ13956 83 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 C9orf66Q5T8R8 295 aa8.17□□□□□ -1.1
FAM3A-221ENST00000612856 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 ZNF702PQ9H963 129 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 U3KQE9 123 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 H3BMM0 161 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 MORN3Q6PF18 240 aaPredicted RBP8.16□□□□□ -1.1
FAM3A-221ENST00000612856 UBE2WQ96B02 151 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 SMCPP49901 116 aaPredicted RBP8.16□□□□□ -1.1
FAM3A-221ENST00000612856 HILS1P60008 231 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 ZMAT4Q9H898 229 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 SMAD5-AS1Q9Y6J3 95 aa8.16□□□□□ -1.1
FAM3A-221ENST00000612856 A4D1N5 150 aa8.15□□□□□ -1.1
FAM3A-221ENST00000612856 PSCAO43653 123 aa8.15□□□□□ -1.1
FAM3A-221ENST00000612856 JPT2Q9H910 190 aa8.15□□□□□ -1.1
FAM3A-221ENST00000612856 FHL3Q13643 280 aa8.15□□□□□ -1.1
FAM3A-221ENST00000612856 Q8N1Y9 231 aa8.15□□□□□ -1.1
FAM3A-221ENST00000612856 OR13C6PQ8NH95 151 aa8.15□□□□□ -1.1
FAM3A-221ENST00000612856 RPL39LQ96EH5 51 aaKnown RBP8.15□□□□□ -1.1
FAM3A-221ENST00000612856 FAM236AA0A1B0GUQ0 79 aa8.15□□□□□ -1.11
FAM3A-221ENST00000612856 FAM236BA0A1B0GV22 79 aa8.15□□□□□ -1.11
FAM3A-221ENST00000612856 CRPP02741 224 aa8.15□□□□□ -1.11
FAM3A-221ENST00000612856 ATXN8Q156A1 80 aa8.15□□□□□ -1.11
FAM3A-221ENST00000612856 MRGPRG-AS1Q2M3A8 158 aa8.15□□□□□ -1.11
FAM3A-221ENST00000612856 ZNF493Q6ZR52 646 aa8.15□□□□□ -1.11
FAM3A-221ENST00000612856 LYPD1Q8N2G4 141 aa8.15□□□□□ -1.11
FAM3A-221ENST00000612856 CRIP2P52943 208 aaPredicted RBP8.14□□□□□ -1.11
FAM3A-221ENST00000612856 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
FAM3A-221ENST00000612856 MALP21145 153 aa8.14□□□□□ -1.11
FAM3A-221ENST00000612856 NDUFA11Q86Y39 141 aa8.14□□□□□ -1.11
FAM3A-221ENST00000612856 ATP6V0E2Q8NHE4 81 aa8.14□□□□□ -1.11
FAM3A-221ENST00000612856 APOC4P55056 127 aa8.14□□□□□ -1.11
FAM3A-221ENST00000612856 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
FAM3A-221ENST00000612856 TP53TG1Q9Y2A0 90 aa8.13□□□□□ -1.11
FAM3A-221ENST00000612856 SMIM2Q9BVW6 85 aa8.13□□□□□ -1.11
FAM3A-221ENST00000612856 H3BUA1 57 aa8.13□□□□□ -1.11
FAM3A-221ENST00000612856 TENM4Q6N022 2769 aa8.13□□□□□ -1.11
FAM3A-221ENST00000612856 CRYGBP07316 175 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 CFC1P0CG37 223 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 TMEM14CQ9P0S9 112 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 CUBNO60494 3623 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 IGLV10-54A0A075B6I4 117 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 TRBV7-3A0A075B6L6 115 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 CMC4P56277 68 aaPredicted RBP8.12□□□□□ -1.11
FAM3A-221ENST00000612856 GPHB5Q86YW7 130 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 SPXQ9BT56 116 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 RHODO00212 210 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 MDFICQ9P1T7 246 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
FAM3A-221ENST00000612856 C4orf3Q8WVX3 66 aa8.11□□□□□ -1.11
FAM3A-221ENST00000612856 PAX4O43316 350 aa8.11□□□□□ -1.11
FAM3A-221ENST00000612856 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms