RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TRBV6-5A0A0K0K1A5 114 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 IGHV3-30-3P0DP02 117 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 SLC25A29Q8N8R3 303 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 PRM2P04554 102 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 RPL32P62910 135 aaKnown RBP6.44□□□□□ -1.38
LIG4-204ENST00000611712 ZFAND6Q6FIF0 208 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 NTN5Q8WTR8 489 aaPredicted RBP6.44□□□□□ -1.38
LIG4-204ENST00000611712 IGLV4-3A0A075B6K6 122 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 HERVK_113P63121 156 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 HIST2H2BDQ6DRA6 164 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 C9orf85Q96MD7 179 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 C11orf68Q9H3H3 251 aaKnown RBP6.44□□□□□ -1.38
LIG4-204ENST00000611712 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
LIG4-204ENST00000611712 MTORP42345 2549 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 IGIPA6NJ69 53 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 ZNF22P17026 224 aaPredicted RBP6.44□□□□□ -1.38
LIG4-204ENST00000611712 RNF152Q8N8N0 203 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 Q9H8V8 135 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 MAP6D1Q9H9H5 199 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
LIG4-204ENST00000611712 FOXI1Q12951 378 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 TEN1Q86WV5 123 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 DNAJC30Q96LL9 226 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 IGHV4-31P0DP07 118 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 HTN3P15516 51 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 GAGE6Q13070 117 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 DAND5Q8N907 189 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 TCL1BO95988 128 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 TSHBP01222 138 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 CRPP02741 224 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 C18orf65Q6ZTR6 163 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 C4orf3Q8WVX3 66 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 UBE2WQ96B02 151 aa6.43□□□□□ -1.38
LIG4-204ENST00000611712 IGHV1-58A0A0C4DH39 117 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 PAX4O43316 350 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 BRI3O95415 125 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 RNASE1P07998 156 aaKnown RBP6.42□□□□□ -1.38
LIG4-204ENST00000611712 Q6ZUT4 128 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 ZNF702PQ9H963 129 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 ANKRD17O75179 2603 aaKnown RBP6.42□□□□□ -1.38
LIG4-204ENST00000611712 TMEM223A0PJW6 202 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 C6orf226Q5I0X4 101 aa6.42□□□□□ -1.38
LIG4-204ENST00000611712 ANKRD29Q8N6D5 301 aa6.41□□□□□ -1.38
LIG4-204ENST00000611712 DEFB114Q30KQ6 69 aa6.41□□□□□ -1.38
LIG4-204ENST00000611712 LINC01620Q4KN68 170 aa6.41□□□□□ -1.38
LIG4-204ENST00000611712 CARD19Q96LW7 228 aa6.41□□□□□ -1.38
LIG4-204ENST00000611712 MAP1AP78559 2803 aaPredicted RBP6.4□□□□□ -1.38
LIG4-204ENST00000611712 RBMY1BA6NDE4 496 aaKnown RBP6.4□□□□□ -1.38
LIG4-204ENST00000611712 RBMY1EA6NEQ0 496 aaKnown RBP6.4□□□□□ -1.38
LIG4-204ENST00000611712 RBMY1DP0C7P1 496 aaKnown RBP6.4□□□□□ -1.38
LIG4-204ENST00000611712 RBMY1A1P0DJD3 496 aaKnown RBP6.4□□□□□ -1.38
LIG4-204ENST00000611712 RBMY1CP0DJD4 496 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 CFAP161Q6P656 301 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 LINC00467Q9BRT7 94 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 IGLV4-69A0A075B6H9 119 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 IGHV3-30P01768 117 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 IGHV3-30-5P0DP03 117 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 PFN2P35080 140 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 VSIG2Q96IQ7 327 aa6.4□□□□□ -1.38
LIG4-204ENST00000611712 FN1P02751 2386 aaKnown RBP6.4□□□□□ -1.39
LIG4-204ENST00000611712 K7EQD1 137 aa6.4□□□□□ -1.39
LIG4-204ENST00000611712 NXPH4O95158 308 aa6.4□□□□□ -1.39
LIG4-204ENST00000611712 CENPEQ02224 2701 aa6.4□□□□□ -1.39
LIG4-204ENST00000611712 IFITM1P13164 125 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 ICOSQ9Y6W8 199 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 KIF25-AS1Q9Y6Z4 181 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 MALP21145 153 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 KLK9Q2XQG4 91 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 CITED2Q99967 270 aaPredicted RBP6.39□□□□□ -1.39
LIG4-204ENST00000611712 CDKN2A-AS1Q9UH64 79 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 TMEM86BQ8N661 226 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 TRAV25A0A0B4J276 109 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
LIG4-204ENST00000611712 Q6ZTI0 123 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
LIG4-204ENST00000611712 EPG5Q9HCE0 2579 aa6.39□□□□□ -1.39
LIG4-204ENST00000611712 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
LIG4-204ENST00000611712 TINCRA0A1B0GVN0 87 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 A8MZ25 164 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 INSL3P51460 131 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 TSPEAR-AS2P59090 65 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 DNAJC9-AS1A6NH13 148 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 ATP6V0E2Q8NHE4 81 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 SCGB1A1P11684 91 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 LINC00315P59091 139 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
LIG4-204ENST00000611712 ACANP16112 2415 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 FAM19A4Q96LR4 140 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 A0A096LPF7 62 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 UBE2D1P51668 147 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 SS18Q15532 418 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 Q6ZSV7 163 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms