RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ADIRFQ15847 76 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 GATD1Q8NB37 220 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 GFRA4Q9GZZ7 299 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 SMDT1Q9H4I9 107 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 NAT8Q9UHE5 227 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 IGKV2D-24A0A075B6R9 120 aa12.69□□□□□ -0.38
SGMS1-208ENST00000608287 IGHV1-24A0A0C4DH33 117 aa12.69□□□□□ -0.38
SGMS1-208ENST00000608287 GAGE6Q13070 117 aa12.69□□□□□ -0.38
SGMS1-208ENST00000608287 COX11Q9Y6N1 276 aa12.69□□□□□ -0.38
SGMS1-208ENST00000608287 A0A1B0GUT8 65 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 ANGP03950 147 aaKnown RBP12.68□□□□□ -0.38
SGMS1-208ENST00000608287 Q0VG73 95 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 IQCJQ1A5X6 159 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 ATRAIDQ6UW56 229 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 Q8N976 141 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 FAM30AQ9NZY2 134 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 V9GYV3 84 aa12.68□□□□□ -0.38
SGMS1-208ENST00000608287 CRPP02741 224 aa12.67□□□□□ -0.38
SGMS1-208ENST00000608287 Q6ZSA8 131 aa12.67□□□□□ -0.38
SGMS1-208ENST00000608287 LECT2O14960 151 aa12.66□□□□□ -0.38
SGMS1-208ENST00000608287 RAB14P61106 215 aa12.65□□□□□ -0.38
SGMS1-208ENST00000608287 RBX1P62877 108 aa12.65□□□□□ -0.38
SGMS1-208ENST00000608287 COTL1Q14019 142 aa12.65□□□□□ -0.38
SGMS1-208ENST00000608287 WFDC2Q14508 124 aa12.65□□□□□ -0.38
SGMS1-208ENST00000608287 ENHOQ6UWT2 76 aa12.65□□□□□ -0.38
SGMS1-208ENST00000608287 BAALCQ8WXS3 180 aa12.65□□□□□ -0.38
SGMS1-208ENST00000608287 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
SGMS1-208ENST00000608287 TMEM243Q9BU79 118 aa12.65□□□□□ -0.38
SGMS1-208ENST00000608287 NUP35Q8NFH5 326 aa12.64□□□□□ -0.39
SGMS1-208ENST00000608287 C1orf43Q9BWL3 253 aa12.64□□□□□ -0.39
SGMS1-208ENST00000608287 AMTP48728 403 aa12.63□□□□□ -0.39
SGMS1-208ENST00000608287 RIGQ13278 110 aa12.63□□□□□ -0.39
SGMS1-208ENST00000608287 TMEM191AQ9H0A3 160 aa12.63□□□□□ -0.39
SGMS1-208ENST00000608287 NAT8BQ9UHF3 227 aa12.63□□□□□ -0.39
SGMS1-208ENST00000608287 UBE2L6O14933 153 aa12.62□□□□□ -0.39
SGMS1-208ENST00000608287 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
SGMS1-208ENST00000608287 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
SGMS1-208ENST00000608287 SDHAF1A6NFY7 115 aa12.6□□□□□ -0.39
SGMS1-208ENST00000608287 MIAQ16674 131 aa12.6□□□□□ -0.39
SGMS1-208ENST00000608287 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.59□□□□□ -0.39
SGMS1-208ENST00000608287 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
SGMS1-208ENST00000608287 RAB4AP20338 218 aa12.59□□□□□ -0.39
SGMS1-208ENST00000608287 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
SGMS1-208ENST00000608287 RNF185Q96GF1 192 aa12.59□□□□□ -0.39
SGMS1-208ENST00000608287 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
SGMS1-208ENST00000608287 GAS8-AS1O95177 125 aa12.58□□□□□ -0.4
SGMS1-208ENST00000608287 C20orf203Q8NBC4 194 aa12.58□□□□□ -0.4
SGMS1-208ENST00000608287 IGLV4-60A0A075B6I1 120 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 TRBV6-5A0A0K0K1A5 114 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 A0A1B0GUV1 79 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 NCR2O95944 276 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 HLA-DQA1P01909 254 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 PMCHP20382 165 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 REG3AQ06141 175 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 MRAP2Q96G30 205 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 ST20Q9HBF5 79 aa12.57□□□□□ -0.4
SGMS1-208ENST00000608287 LRP1Q07954 4544 aaKnown RBP12.57□□□□□ -0.4
SGMS1-208ENST00000608287 I3L3M4 83 aa12.56□□□□□ -0.4
SGMS1-208ENST00000608287 APCSP02743 223 aa12.56□□□□□ -0.4
SGMS1-208ENST00000608287 SCXQ7RTU7 201 aa12.56□□□□□ -0.4
SGMS1-208ENST00000608287 CAMPP49913 170 aa12.55□□□□□ -0.4
SGMS1-208ENST00000608287 IGLV10-54A0A075B6I4 117 aa12.54□□□□□ -0.4
SGMS1-208ENST00000608287 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
SGMS1-208ENST00000608287 RPS10P46783 165 aaKnown RBP12.54□□□□□ -0.4
SGMS1-208ENST00000608287 CLLU1Q5K131 121 aa12.54□□□□□ -0.4
SGMS1-208ENST00000608287 AMMECR1LQ6DCA0 310 aa12.54□□□□□ -0.4
SGMS1-208ENST00000608287 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
SGMS1-208ENST00000608287 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.53□□□□□ -0.4
SGMS1-208ENST00000608287 A0A1B0GW15 77 aa12.53□□□□□ -0.4
SGMS1-208ENST00000608287 IGKV2-29A2NJV5 120 aaPredicted RBP12.53□□□□□ -0.4
SGMS1-208ENST00000608287 C14orf177Q52M58 125 aa12.53□□□□□ -0.4
SGMS1-208ENST00000608287 FAM104BQ5XKR9 115 aa12.52□□□□□ -0.41
SGMS1-208ENST00000608287 MRPL54Q6P161 138 aaKnown RBP12.52□□□□□ -0.41
SGMS1-208ENST00000608287 CHAC1Q9BUX1 264 aa12.52□□□□□ -0.41
SGMS1-208ENST00000608287 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.41
SGMS1-208ENST00000608287 TRAV8-4A0A0B4J246 113 aa12.51□□□□□ -0.41
SGMS1-208ENST00000608287 USP17L23D6RBM5 183 aa12.51□□□□□ -0.41
SGMS1-208ENST00000608287 PPP1R2P9O14990 202 aa12.51□□□□□ -0.41
SGMS1-208ENST00000608287 TSHBP01222 138 aa12.51□□□□□ -0.41
SGMS1-208ENST00000608287 POLR2KP53803 58 aaKnown RBP12.51□□□□□ -0.41
SGMS1-208ENST00000608287 KRTAP10-4P60372 401 aaPredicted RBP12.51□□□□□ -0.41
SGMS1-208ENST00000608287 MRPL51Q4U2R6 128 aaKnown RBP12.51□□□□□ -0.41
SGMS1-208ENST00000608287 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
SGMS1-208ENST00000608287 KRTAP26-1Q6PEX3 210 aa12.51□□□□□ -0.41
SGMS1-208ENST00000608287 H7C423 109 aa12.5□□□□□ -0.41
SGMS1-208ENST00000608287 PPP1R17O96001 155 aa12.5□□□□□ -0.41
SGMS1-208ENST00000608287 IFITM2Q01629 132 aa12.5□□□□□ -0.41
SGMS1-208ENST00000608287 PNRC1Q12796 327 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-208ENST00000608287 FAT3Q8TDW7 4589 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 IGKV3OR2-268A0A0C4DH90 116 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 TRBV27A0A0K0K1C4 114 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 S100A8P05109 93 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 FGF6P10767 208 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 HBBP68871 147 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 LINC01620Q4KN68 170 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 NRACQ8N912 160 aa12.49□□□□□ -0.41
SGMS1-208ENST00000608287 VCYO14598 125 aa12.48□□□□□ -0.41
SGMS1-208ENST00000608287 A0A1B0GXF2 115 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms