RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 FOXA3P55318 350 aaPredicted RBP9.49□□□□□ -0.89
PKNOX1-210ENST00000607049 PEA15Q15121 130 aa9.49□□□□□ -0.89
PKNOX1-210ENST00000607049 TMEM241Q24JQ0 296 aa9.49□□□□□ -0.89
PKNOX1-210ENST00000607049 GATD1Q8NB37 220 aa9.49□□□□□ -0.89
PKNOX1-210ENST00000607049 OSTCQ9NRP0 149 aa9.49□□□□□ -0.89
PKNOX1-210ENST00000607049 PRR34Q9NV39 138 aa9.49□□□□□ -0.89
PKNOX1-210ENST00000607049 TRAV8-4A0A0B4J246 113 aa9.48□□□□□ -0.89
PKNOX1-210ENST00000607049 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
PKNOX1-210ENST00000607049 NCR2O95944 276 aa9.48□□□□□ -0.89
PKNOX1-210ENST00000607049 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
PKNOX1-210ENST00000607049 REG3AQ06141 175 aa9.48□□□□□ -0.89
PKNOX1-210ENST00000607049 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
PKNOX1-210ENST00000607049 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
PKNOX1-210ENST00000607049 HIGD1CA8MV81 97 aa9.47□□□□□ -0.89
PKNOX1-210ENST00000607049 Q5VSD8 79 aa9.47□□□□□ -0.89
PKNOX1-210ENST00000607049 AMMECR1LQ6DCA0 310 aa9.47□□□□□ -0.89
PKNOX1-210ENST00000607049 SMDT1Q9H4I9 107 aa9.47□□□□□ -0.89
PKNOX1-210ENST00000607049 USP17L23D6RBM5 183 aa9.46□□□□□ -0.9
PKNOX1-210ENST00000607049 APCSP02743 223 aa9.46□□□□□ -0.9
PKNOX1-210ENST00000607049 SMR3BP02814 79 aaPredicted RBP9.46□□□□□ -0.9
PKNOX1-210ENST00000607049 RIGQ13278 110 aa9.46□□□□□ -0.9
PKNOX1-210ENST00000607049 H7C423 109 aa9.45□□□□□ -0.9
PKNOX1-210ENST00000607049 INAFM2P0DMQ5 153 aa9.45□□□□□ -0.9
PKNOX1-210ENST00000607049 PMCHP20382 165 aa9.45□□□□□ -0.9
PKNOX1-210ENST00000607049 CLRN3Q8NCR9 226 aa9.45□□□□□ -0.9
PKNOX1-210ENST00000607049 NAT8Q9UHE5 227 aa9.45□□□□□ -0.9
PKNOX1-210ENST00000607049 SDHAF1A6NFY7 115 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 I3L3M4 83 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 PPP1R17O96001 155 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 HAMPP81172 84 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 ADIRFQ15847 76 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 TMEM191AQ9H0A3 160 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 ST20Q9HBF5 79 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
PKNOX1-210ENST00000607049 IGLV10-54A0A075B6I4 117 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 Q6ZSA8 131 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 DEFB104AQ8WTQ1 72 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 MRAP2Q96G30 205 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 TMEM101Q96IK0 257 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 BTF3L4Q96K17 158 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
PKNOX1-210ENST00000607049 IGLV4-60A0A075B6I1 120 aa9.42□□□□□ -0.9
PKNOX1-210ENST00000607049 TRBV6-5A0A0K0K1A5 114 aa9.42□□□□□ -0.9
PKNOX1-210ENST00000607049 PLA2G1BP04054 148 aaKnown RBP9.42□□□□□ -0.9
PKNOX1-210ENST00000607049 ISOC2Q96AB3 205 aa9.42□□□□□ -0.9
PKNOX1-210ENST00000607049 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
PKNOX1-210ENST00000607049 V9GYV3 84 aa9.42□□□□□ -0.9
PKNOX1-210ENST00000607049 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-210ENST00000607049 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
PKNOX1-210ENST00000607049 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
PKNOX1-210ENST00000607049 CFAP161Q6P656 301 aa9.41□□□□□ -0.9
PKNOX1-210ENST00000607049 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.4□□□□□ -0.9
PKNOX1-210ENST00000607049 A0A1B0GW15 77 aa9.4□□□□□ -0.9
PKNOX1-210ENST00000607049 S100A8P05109 93 aa9.4□□□□□ -0.9
PKNOX1-210ENST00000607049 RAB14P61106 215 aa9.4□□□□□ -0.9
PKNOX1-210ENST00000607049 SMAGPQ0VAQ4 97 aa9.4□□□□□ -0.9
PKNOX1-210ENST00000607049 NUP35Q8NFH5 326 aa9.4□□□□□ -0.9
PKNOX1-210ENST00000607049 IGKV3OR2-268A0A0C4DH90 116 aa9.39□□□□□ -0.91
PKNOX1-210ENST00000607049 hDV102S1A0JD36 115 aa9.39□□□□□ -0.91
PKNOX1-210ENST00000607049 PRSS1P07477 247 aa9.39□□□□□ -0.91
PKNOX1-210ENST00000607049 FGF6P10767 208 aa9.39□□□□□ -0.91
PKNOX1-210ENST00000607049 RAB4AP20338 218 aa9.39□□□□□ -0.91
PKNOX1-210ENST00000607049 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
PKNOX1-210ENST00000607049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
PKNOX1-210ENST00000607049 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
PKNOX1-210ENST00000607049 VCYO14598 125 aa9.38□□□□□ -0.91
PKNOX1-210ENST00000607049 FCER1GP30273 86 aa9.38□□□□□ -0.91
PKNOX1-210ENST00000607049 AMN1Q8IY45 258 aa9.38□□□□□ -0.91
PKNOX1-210ENST00000607049 OR5A1Q8NGJ0 315 aa9.38□□□□□ -0.91
PKNOX1-210ENST00000607049 FAT1Q14517 4588 aa9.38□□□□□ -0.91
PKNOX1-210ENST00000607049 PPP1R2P9O14990 202 aa9.37□□□□□ -0.91
PKNOX1-210ENST00000607049 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
PKNOX1-210ENST00000607049 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
PKNOX1-210ENST00000607049 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
PKNOX1-210ENST00000607049 C9orf163Q8N9P6 203 aa9.37□□□□□ -0.91
PKNOX1-210ENST00000607049 KIR2DL4Q99706 377 aa9.37□□□□□ -0.91
PKNOX1-210ENST00000607049 TRBV27A0A0K0K1C4 114 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 GAGE12HA6NDE8 117 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 C9JQL5 133 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 F8W036 122 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 CAMPP49913 170 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 RNF185Q96GF1 192 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
PKNOX1-210ENST00000607049 C7orf77A4D0Y5 90 aa9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 TSHBP01222 138 aa9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 SRSF3P84103 164 aaKnown RBP9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 TMEM18Q96B42 140 aa9.35□□□□□ -0.91
PKNOX1-210ENST00000607049 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
PKNOX1-210ENST00000607049 TCAPO15273 167 aa9.34□□□□□ -0.91
PKNOX1-210ENST00000607049 CKS2P33552 79 aa9.34□□□□□ -0.91
PKNOX1-210ENST00000607049 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms