RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
CCDC12-213ENST00000605875 GATD1Q8NB37 220 aa11.86□□□□□ -0.51
CCDC12-213ENST00000605875 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
CCDC12-213ENST00000605875 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
CCDC12-213ENST00000605875 FOXA3P55318 350 aaPredicted RBP11.85□□□□□ -0.51
CCDC12-213ENST00000605875 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
CCDC12-213ENST00000605875 LINC01551Q86U37 167 aa11.85□□□□□ -0.51
CCDC12-213ENST00000605875 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
CCDC12-213ENST00000605875 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
CCDC12-213ENST00000605875 LRP1Q07954 4544 aaKnown RBP11.85□□□□□ -0.51
CCDC12-213ENST00000605875 A8MWL6 223 aa11.84□□□□□ -0.51
CCDC12-213ENST00000605875 SRP19P09132 144 aaKnown RBP11.84□□□□□ -0.51
CCDC12-213ENST00000605875 CT83Q5H943 113 aa11.84□□□□□ -0.51
CCDC12-213ENST00000605875 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
CCDC12-213ENST00000605875 RPL39LQ96EH5 51 aaKnown RBP11.84□□□□□ -0.51
CCDC12-213ENST00000605875 ZNF727A8MUV8 499 aa11.83□□□□□ -0.52
CCDC12-213ENST00000605875 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
CCDC12-213ENST00000605875 AMTP48728 403 aa11.83□□□□□ -0.52
CCDC12-213ENST00000605875 KRTAP10-4P60372 401 aaPredicted RBP11.83□□□□□ -0.52
CCDC12-213ENST00000605875 COTL1Q14019 142 aa11.83□□□□□ -0.52
CCDC12-213ENST00000605875 NDUFS6O75380 124 aaKnown RBP11.82□□□□□ -0.52
CCDC12-213ENST00000605875 REG3AQ06141 175 aa11.82□□□□□ -0.52
CCDC12-213ENST00000605875 C14orf177Q52M58 125 aa11.82□□□□□ -0.52
CCDC12-213ENST00000605875 C20orf203Q8NBC4 194 aa11.82□□□□□ -0.52
CCDC12-213ENST00000605875 CIRBP-AS1Q8TBR5 109 aa11.82□□□□□ -0.52
CCDC12-213ENST00000605875 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
CCDC12-213ENST00000605875 HMCN2Q8NDA2 5059 aa11.82□□□□□ -0.52
CCDC12-213ENST00000605875 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
CCDC12-213ENST00000605875 IGLV4-60A0A075B6I1 120 aa11.81□□□□□ -0.52
CCDC12-213ENST00000605875 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
CCDC12-213ENST00000605875 UBE2L6O14933 153 aa11.81□□□□□ -0.52
CCDC12-213ENST00000605875 BORCS7Q96B45 105 aa11.81□□□□□ -0.52
CCDC12-213ENST00000605875 OXTP01178 125 aa11.8□□□□□ -0.52
CCDC12-213ENST00000605875 KRTAP26-1Q6PEX3 210 aa11.8□□□□□ -0.52
CCDC12-213ENST00000605875 TSKUQ8WUA8 353 aa11.8□□□□□ -0.52
CCDC12-213ENST00000605875 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
CCDC12-213ENST00000605875 OSTCQ9NRP0 149 aa11.78□□□□□ -0.52
CCDC12-213ENST00000605875 A0A1B0GUT8 65 aa11.77□□□□□ -0.53
CCDC12-213ENST00000605875 A0A1B0GUV1 79 aa11.77□□□□□ -0.53
CCDC12-213ENST00000605875 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.53
CCDC12-213ENST00000605875 APCSP02743 223 aa11.77□□□□□ -0.53
CCDC12-213ENST00000605875 PRSS1P07477 247 aa11.77□□□□□ -0.53
CCDC12-213ENST00000605875 C9JQL5 133 aa11.76□□□□□ -0.53
CCDC12-213ENST00000605875 GAS8-AS1O95177 125 aa11.76□□□□□ -0.53
CCDC12-213ENST00000605875 TEX261Q6UWH6 196 aa11.76□□□□□ -0.53
CCDC12-213ENST00000605875 ISOC2Q96AB3 205 aa11.76□□□□□ -0.53
CCDC12-213ENST00000605875 V9GYV3 84 aa11.76□□□□□ -0.53
CCDC12-213ENST00000605875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-213ENST00000605875 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-213ENST00000605875 RPL23P62829 140 aaKnown RBP11.75□□□□□ -0.53
CCDC12-213ENST00000605875 SRSF3P84103 164 aaKnown RBP11.75□□□□□ -0.53
CCDC12-213ENST00000605875 ADIRFQ15847 76 aa11.75□□□□□ -0.53
CCDC12-213ENST00000605875 IGKV3OR2-268A0A0C4DH90 116 aa11.74□□□□□ -0.53
CCDC12-213ENST00000605875 FAM231BA6NCW3 169 aa11.74□□□□□ -0.53
CCDC12-213ENST00000605875 NCR2O95944 276 aa11.74□□□□□ -0.53
CCDC12-213ENST00000605875 TMEM241Q24JQ0 296 aa11.74□□□□□ -0.53
CCDC12-213ENST00000605875 FAM74A3Q4VXF1 159 aa11.74□□□□□ -0.53
CCDC12-213ENST00000605875 TMEM191AQ9H0A3 160 aa11.74□□□□□ -0.53
CCDC12-213ENST00000605875 TRAV8-4A0A0B4J246 113 aa11.73□□□□□ -0.53
CCDC12-213ENST00000605875 TRBV6-5A0A0K0K1A5 114 aa11.73□□□□□ -0.53
CCDC12-213ENST00000605875 AMMECR1LQ6DCA0 310 aa11.73□□□□□ -0.53
CCDC12-213ENST00000605875 AMN1Q8IY45 258 aa11.73□□□□□ -0.53
CCDC12-213ENST00000605875 RNF185Q96GF1 192 aa11.73□□□□□ -0.53
CCDC12-213ENST00000605875 PLA2G2DQ9UNK4 145 aa11.73□□□□□ -0.53
CCDC12-213ENST00000605875 PKHD1L1Q86WI1 4243 aa11.73□□□□□ -0.53
CCDC12-213ENST00000605875 RPS10P46783 165 aaKnown RBP11.72□□□□□ -0.53
CCDC12-213ENST00000605875 RPL37AP61513 92 aaKnown RBP11.72□□□□□ -0.53
CCDC12-213ENST00000605875 RNASEKQ6P5S7 137 aaKnown RBP11.72□□□□□ -0.53
CCDC12-213ENST00000605875 NUP35Q8NFH5 326 aa11.72□□□□□ -0.53
CCDC12-213ENST00000605875 TMEM242Q9NWH2 141 aa11.72□□□□□ -0.53
CCDC12-213ENST00000605875 NAT8Q9UHE5 227 aa11.72□□□□□ -0.53
CCDC12-213ENST00000605875 UBR4Q5T4S7 5183 aa11.72□□□□□ -0.53
CCDC12-213ENST00000605875 I3L3M4 83 aa11.71□□□□□ -0.53
CCDC12-213ENST00000605875 PMCHP20382 165 aa11.71□□□□□ -0.53
CCDC12-213ENST00000605875 ST20Q9HBF5 79 aa11.71□□□□□ -0.53
CCDC12-213ENST00000605875 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 SMKR1H3BMG3 65 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 TSHBP01222 138 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 FGF6P10767 208 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 RAB4AP20338 218 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 RIGQ13278 110 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 PEA15Q15121 130 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 MRAP2Q96G30 205 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 NAT8BQ9UHF3 227 aa11.7□□□□□ -0.54
CCDC12-213ENST00000605875 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
CCDC12-213ENST00000605875 H7C423 109 aa11.68□□□□□ -0.54
CCDC12-213ENST00000605875 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
CCDC12-213ENST00000605875 CLRN3Q8NCR9 226 aa11.68□□□□□ -0.54
CCDC12-213ENST00000605875 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
CCDC12-213ENST00000605875 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
CCDC12-213ENST00000605875 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
CCDC12-213ENST00000605875 CNBPP62633 177 aaKnown RBP11.66□□□□□ -0.54
CCDC12-213ENST00000605875 C15orf56Q8N910 161 aa11.66□□□□□ -0.54
CCDC12-213ENST00000605875 CHCHD10Q8WYQ3 142 aaPredicted RBP11.66□□□□□ -0.54
CCDC12-213ENST00000605875 TRBV27A0A0K0K1C4 114 aa11.65□□□□□ -0.54
CCDC12-213ENST00000605875 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.54
CCDC12-213ENST00000605875 ESDP10768 282 aa11.65□□□□□ -0.54
CCDC12-213ENST00000605875 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
CCDC12-213ENST00000605875 SMDT1Q9H4I9 107 aa11.65□□□□□ -0.54
CCDC12-213ENST00000605875 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms