RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ENHOQ6UWT2 76 aa9.55□□□□□ -0.88
TUBE1-208ENST00000604743 TMEM243Q9BU79 118 aa9.55□□□□□ -0.88
TUBE1-208ENST00000604743 FAM231BA6NCW3 169 aa9.54□□□□□ -0.88
TUBE1-208ENST00000604743 UQCC3Q6UW78 93 aa9.54□□□□□ -0.88
TUBE1-208ENST00000604743 NUP35Q8NFH5 326 aa9.54□□□□□ -0.88
TUBE1-208ENST00000604743 C1orf43Q9BWL3 253 aa9.54□□□□□ -0.88
TUBE1-208ENST00000604743 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
TUBE1-208ENST00000604743 UBE2L6O14933 153 aa9.53□□□□□ -0.88
TUBE1-208ENST00000604743 AMTP48728 403 aa9.53□□□□□ -0.88
TUBE1-208ENST00000604743 RIGQ13278 110 aa9.53□□□□□ -0.88
TUBE1-208ENST00000604743 LINC00269Q8N2A0 174 aa9.53□□□□□ -0.88
TUBE1-208ENST00000604743 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
TUBE1-208ENST00000604743 FRZBQ92765 325 aa9.53□□□□□ -0.88
TUBE1-208ENST00000604743 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
TUBE1-208ENST00000604743 GAS8-AS1O95177 125 aa9.52□□□□□ -0.89
TUBE1-208ENST00000604743 NAT8BQ9UHF3 227 aa9.52□□□□□ -0.89
TUBE1-208ENST00000604743 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
TUBE1-208ENST00000604743 HLA-DQA1P01909 254 aa9.51□□□□□ -0.89
TUBE1-208ENST00000604743 AMN1Q8IY45 258 aa9.51□□□□□ -0.89
TUBE1-208ENST00000604743 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
TUBE1-208ENST00000604743 KRTAP17-1Q9BYP8 105 aa9.51□□□□□ -0.89
TUBE1-208ENST00000604743 PCLOQ9Y6V0 5065 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 IGLV4-60A0A075B6I1 120 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 RAB4AP20338 218 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 PMCHP20382 165 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 MIAQ16674 131 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 COMMD7Q86VX2 200 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 KRTAP4-5Q9BYR2 181 aa9.5□□□□□ -0.89
TUBE1-208ENST00000604743 IGLV10-54A0A075B6I4 117 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 LINC00862A6NCI5 91 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 SMKR1H3BMG3 65 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 APCSP02743 223 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 CAMPP49913 170 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 REG3AQ06141 175 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 ST20Q9HBF5 79 aa9.49□□□□□ -0.89
TUBE1-208ENST00000604743 ABCA13Q86UQ4 5058 aa9.48□□□□□ -0.89
TUBE1-208ENST00000604743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.48□□□□□ -0.89
TUBE1-208ENST00000604743 IGKV2-29A2NJV5 120 aaPredicted RBP9.48□□□□□ -0.89
TUBE1-208ENST00000604743 NCR2O95944 276 aa9.48□□□□□ -0.89
TUBE1-208ENST00000604743 RPS10P46783 165 aaKnown RBP9.48□□□□□ -0.89
TUBE1-208ENST00000604743 XGP55808 180 aa9.48□□□□□ -0.89
TUBE1-208ENST00000604743 HAMPP81172 84 aa9.48□□□□□ -0.89
TUBE1-208ENST00000604743 MRAP2Q96G30 205 aa9.48□□□□□ -0.89
TUBE1-208ENST00000604743 PRR34Q9NV39 138 aa9.48□□□□□ -0.89
TUBE1-208ENST00000604743 DNAH8Q96JB1 4490 aa9.47□□□□□ -0.89
TUBE1-208ENST00000604743 IGKV3OR2-268A0A0C4DH90 116 aa9.47□□□□□ -0.89
TUBE1-208ENST00000604743 TRBV6-5A0A0K0K1A5 114 aa9.47□□□□□ -0.89
TUBE1-208ENST00000604743 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
TUBE1-208ENST00000604743 I3L3M4 83 aa9.47□□□□□ -0.89
TUBE1-208ENST00000604743 AMMECR1LQ6DCA0 310 aa9.47□□□□□ -0.89
TUBE1-208ENST00000604743 MRPL54Q6P161 138 aaKnown RBP9.47□□□□□ -0.89
TUBE1-208ENST00000604743 RNASEKQ6P5S7 137 aaKnown RBP9.47□□□□□ -0.89
TUBE1-208ENST00000604743 Q8N1X5 172 aa9.47□□□□□ -0.89
TUBE1-208ENST00000604743 NDUFA5Q16718 116 aa9.46□□□□□ -0.9
TUBE1-208ENST00000604743 LINC01620Q4KN68 170 aa9.46□□□□□ -0.9
TUBE1-208ENST00000604743 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
TUBE1-208ENST00000604743 TMEM242Q9NWH2 141 aa9.46□□□□□ -0.9
TUBE1-208ENST00000604743 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
TUBE1-208ENST00000604743 FAM104BQ5XKR9 115 aa9.45□□□□□ -0.9
TUBE1-208ENST00000604743 TSHBP01222 138 aa9.44□□□□□ -0.9
TUBE1-208ENST00000604743 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
TUBE1-208ENST00000604743 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
TUBE1-208ENST00000604743 MRPL51Q4U2R6 128 aaKnown RBP9.44□□□□□ -0.9
TUBE1-208ENST00000604743 C14orf177Q52M58 125 aa9.44□□□□□ -0.9
TUBE1-208ENST00000604743 FAM30AQ9NZY2 134 aa9.44□□□□□ -0.9
TUBE1-208ENST00000604743 TRAV8-4A0A0B4J246 113 aa9.43□□□□□ -0.9
TUBE1-208ENST00000604743 A0A1B0GW15 77 aa9.43□□□□□ -0.9
TUBE1-208ENST00000604743 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
TUBE1-208ENST00000604743 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
TUBE1-208ENST00000604743 FGF6P10767 208 aa9.43□□□□□ -0.9
TUBE1-208ENST00000604743 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
TUBE1-208ENST00000604743 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 F8W036 122 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 H7C423 109 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 VCYO14598 125 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 PPP1R17O96001 155 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 CKS2P33552 79 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 HBBP68871 147 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 NRACQ8N912 160 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
TUBE1-208ENST00000604743 TRBV27A0A0K0K1C4 114 aa9.41□□□□□ -0.9
TUBE1-208ENST00000604743 S100A8P05109 93 aa9.41□□□□□ -0.9
TUBE1-208ENST00000604743 PRSS1P07477 247 aa9.41□□□□□ -0.9
TUBE1-208ENST00000604743 FCER1GP30273 86 aa9.41□□□□□ -0.9
TUBE1-208ENST00000604743 SUMO2P61956 95 aaKnown RBP9.41□□□□□ -0.9
TUBE1-208ENST00000604743 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
TUBE1-208ENST00000604743 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
TUBE1-208ENST00000604743 FAT1Q14517 4588 aa9.4□□□□□ -0.9
TUBE1-208ENST00000604743 A0A1B0GXF2 115 aa9.4□□□□□ -0.9
TUBE1-208ENST00000604743 EPM2AB3EWF7 344 aa9.4□□□□□ -0.9
TUBE1-208ENST00000604743 MT-ND4LP03901 98 aa9.4□□□□□ -0.9
TUBE1-208ENST00000604743 ESDP10768 282 aa9.4□□□□□ -0.9
TUBE1-208ENST00000604743 C7orf77A4D0Y5 90 aa9.39□□□□□ -0.91
TUBE1-208ENST00000604743 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
TUBE1-208ENST00000604743 D6R8Y8 96 aa9.39□□□□□ -0.91
TUBE1-208ENST00000604743 OR5A1Q8NGJ0 315 aa9.39□□□□□ -0.91
TUBE1-208ENST00000604743 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
TUBE1-208ENST00000604743 KIR2DL4Q99706 377 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms