RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 SULT1A2P50226 295 aa14.8□□□□□ -0.04
GTPBP3-227ENST00000602056 MED9Q9NWA0 146 aa14.8□□□□□ -0.04
GTPBP3-227ENST00000602056 XKRY2A2RUG3 117 aa14.79□□□□□ -0.04
GTPBP3-227ENST00000602056 PDE6DO43924 150 aa14.79□□□□□ -0.04
GTPBP3-227ENST00000602056 CHTF8P0CG12 524 aa14.79□□□□□ -0.04
GTPBP3-227ENST00000602056 MT1HL1P0DM35 61 aa14.79□□□□□ -0.04
GTPBP3-227ENST00000602056 CTRLP40313 264 aa14.79□□□□□ -0.04
GTPBP3-227ENST00000602056 NUDT10Q8NFP7 164 aa14.79□□□□□ -0.04
GTPBP3-227ENST00000602056 NUDT11Q96G61 164 aa14.79□□□□□ -0.04
GTPBP3-227ENST00000602056 PLA2G2DQ9UNK4 145 aa14.78□□□□□ -0.04
GTPBP3-227ENST00000602056 BCL2P10415 239 aa14.77□□□□□ -0.05
GTPBP3-227ENST00000602056 AMTP48728 403 aa14.77□□□□□ -0.05
GTPBP3-227ENST00000602056 WDR73Q6P4I2 378 aa14.77□□□□□ -0.05
GTPBP3-227ENST00000602056 GATD1Q8NB37 220 aa14.77□□□□□ -0.05
GTPBP3-227ENST00000602056 CNFNQ9BYD5 112 aa14.77□□□□□ -0.05
GTPBP3-227ENST00000602056 IGHV3-64A0A075B6Q5 118 aa14.76□□□□□ -0.05
GTPBP3-227ENST00000602056 COTL1Q14019 142 aa14.76□□□□□ -0.05
GTPBP3-227ENST00000602056 A0A087WYN8 130 aa14.75□□□□□ -0.05
GTPBP3-227ENST00000602056 TRAV26-2A0A0B4J265 109 aa14.75□□□□□ -0.05
GTPBP3-227ENST00000602056 TEX46H3BTG2 121 aa14.75□□□□□ -0.05
GTPBP3-227ENST00000602056 EIF5AL1Q6IS14 154 aaKnown RBP14.75□□□□□ -0.05
GTPBP3-227ENST00000602056 C15orf56Q8N910 161 aa14.75□□□□□ -0.05
GTPBP3-227ENST00000602056 SPACA4Q8TDM5 124 aa14.75□□□□□ -0.05
GTPBP3-227ENST00000602056 K7EN84 100 aa14.74□□□□□ -0.05
GTPBP3-227ENST00000602056 UBE2L6O14933 153 aa14.74□□□□□ -0.05
GTPBP3-227ENST00000602056 TWIST1Q15672 202 aa14.74□□□□□ -0.05
GTPBP3-227ENST00000602056 BIN3Q9NQY0 253 aa14.74□□□□□ -0.05
GTPBP3-227ENST00000602056 AP5S1Q9NUS5 200 aa14.74□□□□□ -0.05
GTPBP3-227ENST00000602056 GAGE12HA6NDE8 117 aa14.73□□□□□ -0.05
GTPBP3-227ENST00000602056 RNASE7Q9H1E1 156 aaKnown RBP14.73□□□□□ -0.05
GTPBP3-227ENST00000602056 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.72□□□□□ -0.05
GTPBP3-227ENST00000602056 FOXA3P55318 350 aaPredicted RBP14.72□□□□□ -0.05
GTPBP3-227ENST00000602056 Q6ZNX1 250 aa14.72□□□□□ -0.05
GTPBP3-227ENST00000602056 RPP21Q9H633 154 aaKnown RBP14.72□□□□□ -0.05
GTPBP3-227ENST00000602056 IGKV3OR2-268A0A0C4DH90 116 aa14.71□□□□□ -0.05
GTPBP3-227ENST00000602056 Q6ZRU5 148 aa14.71□□□□□ -0.05
GTPBP3-227ENST00000602056 OCC1Q8TAD7 63 aa14.71□□□□□ -0.05
GTPBP3-227ENST00000602056 GTSF1Q8WW33 167 aa14.71□□□□□ -0.05
GTPBP3-227ENST00000602056 RPL39LQ96EH5 51 aaKnown RBP14.71□□□□□ -0.05
GTPBP3-227ENST00000602056 DPH3Q96FX2 82 aa14.71□□□□□ -0.05
GTPBP3-227ENST00000602056 RNF185Q96GF1 192 aa14.71□□□□□ -0.05
GTPBP3-227ENST00000602056 PLAC8Q9NZF1 115 aa14.69□□□□□ -0.06
GTPBP3-227ENST00000602056 HIGD2BQ4VC39 106 aa14.68□□□□□ -0.06
GTPBP3-227ENST00000602056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.67□□□□□ -0.06
GTPBP3-227ENST00000602056 IGKV2-29A2NJV5 120 aaPredicted RBP14.67□□□□□ -0.06
GTPBP3-227ENST00000602056 COX6A2Q02221 97 aa14.67□□□□□ -0.06
GTPBP3-227ENST00000602056 SLC51BQ86UW2 128 aa14.67□□□□□ -0.06
GTPBP3-227ENST00000602056 CHCHD10Q8WYQ3 142 aaPredicted RBP14.67□□□□□ -0.06
GTPBP3-227ENST00000602056 CFAP161Q6P656 301 aa14.66□□□□□ -0.06
GTPBP3-227ENST00000602056 TCTE3Q8IZS6 198 aa14.66□□□□□ -0.06
GTPBP3-227ENST00000602056 PRSS3P2Q8NHM4 247 aa14.66□□□□□ -0.06
GTPBP3-227ENST00000602056 PHOX2AO14813 284 aa14.65□□□□□ -0.06
GTPBP3-227ENST00000602056 NCR2O95944 276 aa14.65□□□□□ -0.06
GTPBP3-227ENST00000602056 RPS10P46783 165 aaKnown RBP14.65□□□□□ -0.06
GTPBP3-227ENST00000602056 FGF6P10767 208 aa14.64□□□□□ -0.07
GTPBP3-227ENST00000602056 TAGLN2P37802 199 aaKnown RBP14.64□□□□□ -0.07
GTPBP3-227ENST00000602056 AMMECR1LQ6DCA0 310 aa14.64□□□□□ -0.07
GTPBP3-227ENST00000602056 GVQW2A0A096LPI5 108 aaPredicted RBP14.63□□□□□ -0.07
GTPBP3-227ENST00000602056 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
GTPBP3-227ENST00000602056 SDHAF1A6NFY7 115 aa14.63□□□□□ -0.07
GTPBP3-227ENST00000602056 GAS8-AS1O95177 125 aa14.63□□□□□ -0.07
GTPBP3-227ENST00000602056 FOXI1Q12951 378 aa14.63□□□□□ -0.07
GTPBP3-227ENST00000602056 RNASEKQ6P5S7 137 aaKnown RBP14.63□□□□□ -0.07
GTPBP3-227ENST00000602056 H7C423 109 aa14.62□□□□□ -0.07
GTPBP3-227ENST00000602056 APCSP02743 223 aa14.62□□□□□ -0.07
GTPBP3-227ENST00000602056 NDUFS6O75380 124 aaKnown RBP14.61□□□□□ -0.07
GTPBP3-227ENST00000602056 MAJINQ3KP22 176 aa14.61□□□□□ -0.07
GTPBP3-227ENST00000602056 IGKV2-24A0A0C4DH68 120 aa14.6□□□□□ -0.07
GTPBP3-227ENST00000602056 GATCO43716 136 aaKnown RBP14.59□□□□□ -0.07
GTPBP3-227ENST00000602056 SMIM15Q7Z3B0 74 aa14.59□□□□□ -0.07
GTPBP3-227ENST00000602056 TRBV6-5A0A0K0K1A5 114 aa14.58□□□□□ -0.08
GTPBP3-227ENST00000602056 TEX261Q6UWH6 196 aa14.58□□□□□ -0.08
GTPBP3-227ENST00000602056 FAM231DQ6ZW35 169 aa14.58□□□□□ -0.08
GTPBP3-227ENST00000602056 OR5A1Q8NGJ0 315 aa14.58□□□□□ -0.08
GTPBP3-227ENST00000602056 C7orf33Q8WU49 177 aa14.58□□□□□ -0.08
GTPBP3-227ENST00000602056 A0A096LNI7 61 aa14.57□□□□□ -0.08
GTPBP3-227ENST00000602056 I3L3M4 83 aa14.57□□□□□ -0.08
GTPBP3-227ENST00000602056 TSHBP01222 138 aa14.57□□□□□ -0.08
GTPBP3-227ENST00000602056 ESDP10768 282 aa14.57□□□□□ -0.08
GTPBP3-227ENST00000602056 TNXBP22105 4242 aa14.57□□□□□ -0.08
GTPBP3-227ENST00000602056 TMEM250H0YL14 139 aa14.56□□□□□ -0.08
GTPBP3-227ENST00000602056 ZNF25P17030 456 aaPredicted RBP14.56□□□□□ -0.08
GTPBP3-227ENST00000602056 PMCHP20382 165 aa14.56□□□□□ -0.08
GTPBP3-227ENST00000602056 XCL1P47992 114 aa14.56□□□□□ -0.08
GTPBP3-227ENST00000602056 STPG4Q8N801 248 aa14.56□□□□□ -0.08
GTPBP3-227ENST00000602056 LINC00526Q96FQ7 95 aa14.56□□□□□ -0.08
GTPBP3-227ENST00000602056 LINC00959A0A1B0GUT2 108 aa14.55□□□□□ -0.08
GTPBP3-227ENST00000602056 A8MWL6 223 aa14.55□□□□□ -0.08
GTPBP3-227ENST00000602056 PRR3P79522 188 aaKnown RBP14.55□□□□□ -0.08
GTPBP3-227ENST00000602056 TMEM242Q9NWH2 141 aa14.55□□□□□ -0.08
GTPBP3-227ENST00000602056 CCL25O15444 150 aa14.54□□□□□ -0.08
GTPBP3-227ENST00000602056 LYPD6BQ8NI32 183 aa14.54□□□□□ -0.08
GTPBP3-227ENST00000602056 CT83Q5H943 113 aa14.53□□□□□ -0.08
GTPBP3-227ENST00000602056 ALKAL2Q6UX46 152 aa14.52□□□□□ -0.09
GTPBP3-227ENST00000602056 POLR2KP53803 58 aaKnown RBP14.51□□□□□ -0.09
GTPBP3-227ENST00000602056 TMEM101Q96IK0 257 aa14.51□□□□□ -0.09
GTPBP3-227ENST00000602056 BTF3L4Q96K17 158 aa14.51□□□□□ -0.09
GTPBP3-227ENST00000602056 ST20Q9HBF5 79 aa14.51□□□□□ -0.09
GTPBP3-227ENST00000602056 CDC42SE2Q9NRR3 84 aa14.51□□□□□ -0.09
GTPBP3-227ENST00000602056 IGHV1-58A0A0C4DH39 117 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms