RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 CIDEAO60543 219 aa7.11□□□□□ -1.27
UPF1-213ENST00000601981 OR4C5Q8NGB2 326 aa7.11□□□□□ -1.27
UPF1-213ENST00000601981 NACAE9PAV3 2078 aa7.11□□□□□ -1.27
UPF1-213ENST00000601981 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
UPF1-213ENST00000601981 NUDT3O95989 172 aa7.1□□□□□ -1.27
UPF1-213ENST00000601981 IGHV3-53P01767 116 aa7.1□□□□□ -1.27
UPF1-213ENST00000601981 G0S2P27469 103 aa7.1□□□□□ -1.27
UPF1-213ENST00000601981 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
UPF1-213ENST00000601981 C15orf53Q8NAA6 179 aa7.1□□□□□ -1.27
UPF1-213ENST00000601981 IFI27L1Q96BM0 104 aa7.1□□□□□ -1.27
UPF1-213ENST00000601981 IGHV3-73A0A0B4J1V6 119 aa7.09□□□□□ -1.27
UPF1-213ENST00000601981 TRGV4A0A0C4DH28 118 aa7.09□□□□□ -1.27
UPF1-213ENST00000601981 ATP5LO75964 103 aa7.09□□□□□ -1.27
UPF1-213ENST00000601981 PKIAP61925 76 aa7.09□□□□□ -1.27
UPF1-213ENST00000601981 DNAJC30Q96LL9 226 aa7.09□□□□□ -1.27
UPF1-213ENST00000601981 KIR2DL4Q99706 377 aa7.09□□□□□ -1.27
UPF1-213ENST00000601981 VAMP8Q9BV40 100 aa7.09□□□□□ -1.27
UPF1-213ENST00000601981 STARD9Q9P2P6 4700 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 I3L3M4 83 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 RHOHQ15669 191 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 LGALS9CQ6DKI2 356 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 ZNF664Q8N3J9 261 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 CSMD3Q7Z407 3707 aa7.08□□□□□ -1.28
UPF1-213ENST00000601981 TRBV10-1A0A0K0K1A3 114 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 PCP4L1A6NKN8 68 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 H3BNG1 76 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 Q6ZSN1 163 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 NEGR1Q7Z3B1 354 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 NEXN-AS1Q8NBZ9 246 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 ZNF479Q96JC4 524 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 PRO0255Q9UI72 69 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 CYSLTR1Q9Y271 337 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 TNFRSF18Q9Y5U5 241 aa7.07□□□□□ -1.28
UPF1-213ENST00000601981 TENM2Q9NT68 2774 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 DYNC2H1Q8NCM8 4307 aaKnown RBP7.06□□□□□ -1.28
UPF1-213ENST00000601981 TRAV26-1A0A087WT03 109 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 K7EQD1 137 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 PAX4O43316 350 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 TSHBP01222 138 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 P0DMU3 169 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 FAM231AP0DMU4 169 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 FAM231CP0DMU5 169 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 C2orf66Q6UXQ4 117 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 HHLA3Q9XRX5 114 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
UPF1-213ENST00000601981 TRAV9-2A0A087WT02 112 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 A0A0J9YY99 117 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 H0Y8G0 127 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
UPF1-213ENST00000601981 FHL2Q14192 279 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 ERASQ7Z444 233 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 SCGB3A1Q96QR1 104 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 PRADC1Q9BSG0 188 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 PRO1933Q9H354 126 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 APLNQ9ULZ1 77 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 PAM16Q9Y3D7 125 aa7.05□□□□□ -1.28
UPF1-213ENST00000601981 EPPK1P58107 5090 aaKnown RBP7.05□□□□□ -1.28
UPF1-213ENST00000601981 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 TRBV6-4A0A1B0GX49 114 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 CRYBA4P53673 196 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 ODF1Q14990 250 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 SPATA45Q537H7 98 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 Q6ZN92 141 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 ATOH7Q8N100 152 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 TIMM17AQ99595 171 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 ICOSQ9Y6W8 199 aa7.04□□□□□ -1.28
UPF1-213ENST00000601981 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
UPF1-213ENST00000601981 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
UPF1-213ENST00000601981 PRSS1P07477 247 aa7.03□□□□□ -1.28
UPF1-213ENST00000601981 RPL36AP83881 106 aaKnown RBP7.03□□□□□ -1.28
UPF1-213ENST00000601981 MRPL23Q16540 153 aaKnown RBP7.03□□□□□ -1.28
UPF1-213ENST00000601981 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
UPF1-213ENST00000601981 UBE2DNLQ8IWF7 75 aa7.03□□□□□ -1.28
UPF1-213ENST00000601981 SLC25A29Q8N8R3 303 aa7.03□□□□□ -1.28
UPF1-213ENST00000601981 C20orf203Q8NBC4 194 aa7.03□□□□□ -1.28
UPF1-213ENST00000601981 RPL36ALQ969Q0 106 aaKnown RBP7.03□□□□□ -1.28
UPF1-213ENST00000601981 RYR2Q92736 4967 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 TRBV7-3A0A075B6L6 115 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 A0A087WX48 190 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 IGIPA6NJ69 53 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 DDTP30046 118 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 CCL18P55774 89 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 COTL1Q14019 142 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 PMCHL2Q9BQD1 86 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 Q9UF83 564 aa7.02□□□□□ -1.29
UPF1-213ENST00000601981 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
UPF1-213ENST00000601981 DPM2O94777 84 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 LY6G6CO95867 125 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 NPSP0C0P6 89 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 GYPEP15421 78 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 UBE2D3P61077 147 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 UBE2D2P62837 147 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 RPL39P62891 51 aaKnown RBP7.01□□□□□ -1.29
UPF1-213ENST00000601981 MAJINQ3KP22 176 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 DAZ4Q86SG3 579 aaKnown RBP7.01□□□□□ -1.29
UPF1-213ENST00000601981 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
UPF1-213ENST00000601981 BAALCQ8WXS3 180 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms