RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 LOC389332A0A1B0GUA5 103 aa12.63□□□□□ -0.39
KCNN4-208ENST00000601549 ESDP10768 282 aa12.63□□□□□ -0.39
KCNN4-208ENST00000601549 SMAGPQ0VAQ4 97 aa12.63□□□□□ -0.39
KCNN4-208ENST00000601549 LAGE3Q14657 143 aa12.63□□□□□ -0.39
KCNN4-208ENST00000601549 MUC7Q8TAX7 377 aa12.63□□□□□ -0.39
KCNN4-208ENST00000601549 A0A096LPF7 62 aa12.62□□□□□ -0.39
KCNN4-208ENST00000601549 LOC100131303A0A0U1RQF7 123 aa12.62□□□□□ -0.39
KCNN4-208ENST00000601549 TMEM18Q96B42 140 aa12.62□□□□□ -0.39
KCNN4-208ENST00000601549 Q9UF83 564 aa12.62□□□□□ -0.39
KCNN4-208ENST00000601549 H7C423 109 aa12.61□□□□□ -0.39
KCNN4-208ENST00000601549 PKIAP61925 76 aa12.61□□□□□ -0.39
KCNN4-208ENST00000601549 IQCJQ1A5X6 159 aa12.61□□□□□ -0.39
KCNN4-208ENST00000601549 C3orf84H3BNL1 204 aa12.6□□□□□ -0.39
KCNN4-208ENST00000601549 HSBP1O75506 76 aa12.6□□□□□ -0.39
KCNN4-208ENST00000601549 TSHBP01222 138 aa12.6□□□□□ -0.39
KCNN4-208ENST00000601549 RNASEKQ6P5S7 137 aaKnown RBP12.6□□□□□ -0.39
KCNN4-208ENST00000601549 TRBV25-1A0A075B6N4 114 aa12.59□□□□□ -0.39
KCNN4-208ENST00000601549 TRBV6-8A0A0A6YYG3 113 aa12.59□□□□□ -0.39
KCNN4-208ENST00000601549 IGHV1-24A0A0C4DH33 117 aa12.59□□□□□ -0.39
KCNN4-208ENST00000601549 SERF1AO75920 110 aa12.59□□□□□ -0.39
KCNN4-208ENST00000601549 NDUFA6P56556 154 aa12.59□□□□□ -0.39
KCNN4-208ENST00000601549 PACRGQ96M98 296 aaPredicted RBP12.59□□□□□ -0.39
KCNN4-208ENST00000601549 IGLL5B9A064 214 aa12.58□□□□□ -0.4
KCNN4-208ENST00000601549 NUDT3O95989 172 aa12.58□□□□□ -0.4
KCNN4-208ENST00000601549 NPSP0C0P6 89 aa12.57□□□□□ -0.4
KCNN4-208ENST00000601549 AMTP48728 403 aa12.57□□□□□ -0.4
KCNN4-208ENST00000601549 LELP1Q5T871 98 aa12.57□□□□□ -0.4
KCNN4-208ENST00000601549 URB1-AS1Q96HZ7 61 aa12.57□□□□□ -0.4
KCNN4-208ENST00000601549 TMEM243Q9BU79 118 aa12.56□□□□□ -0.4
KCNN4-208ENST00000601549 IGHV3-38A0A0C4DH36 116 aa12.55□□□□□ -0.4
KCNN4-208ENST00000601549 HBDP02042 147 aa12.55□□□□□ -0.4
KCNN4-208ENST00000601549 LYPD5Q6UWN5 251 aa12.55□□□□□ -0.4
KCNN4-208ENST00000601549 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
KCNN4-208ENST00000601549 CYSLTR1Q9Y271 337 aa12.55□□□□□ -0.4
KCNN4-208ENST00000601549 TRAV8-6A0A0B4J262 113 aa12.54□□□□□ -0.4
KCNN4-208ENST00000601549 CCL18P55774 89 aa12.54□□□□□ -0.4
KCNN4-208ENST00000601549 LINC00310P59036 64 aa12.54□□□□□ -0.4
KCNN4-208ENST00000601549 TIMM21Q9BVV7 248 aa12.54□□□□□ -0.4
KCNN4-208ENST00000601549 C5orf52A6NGY3 159 aa12.53□□□□□ -0.4
KCNN4-208ENST00000601549 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
KCNN4-208ENST00000601549 TOMM6Q96B49 74 aa12.53□□□□□ -0.4
KCNN4-208ENST00000601549 CHCHD7Q9BUK0 85 aa12.53□□□□□ -0.4
KCNN4-208ENST00000601549 PYGO1Q9Y3Y4 419 aa12.53□□□□□ -0.4
KCNN4-208ENST00000601549 CSDC2Q9Y534 153 aaKnown RBP12.53□□□□□ -0.4
KCNN4-208ENST00000601549 UBE2L6O14933 153 aa12.52□□□□□ -0.41
KCNN4-208ENST00000601549 ZNF25P17030 456 aaPredicted RBP12.52□□□□□ -0.41
KCNN4-208ENST00000601549 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.41
KCNN4-208ENST00000601549 MRPL52Q86TS9 123 aaKnown RBP12.52□□□□□ -0.41
KCNN4-208ENST00000601549 SPANXA1Q9NS26 97 aa12.52□□□□□ -0.41
KCNN4-208ENST00000601549 APLNQ9ULZ1 77 aa12.52□□□□□ -0.41
KCNN4-208ENST00000601549 PAPPA-AS1Q5QFB9 102 aa12.51□□□□□ -0.41
KCNN4-208ENST00000601549 CASC10Q5T4H9 136 aa12.51□□□□□ -0.41
KCNN4-208ENST00000601549 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
KCNN4-208ENST00000601549 ATP5LO75964 103 aa12.5□□□□□ -0.41
KCNN4-208ENST00000601549 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
KCNN4-208ENST00000601549 S100A2P29034 98 aa12.5□□□□□ -0.41
KCNN4-208ENST00000601549 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
KCNN4-208ENST00000601549 TIMM17AQ99595 171 aa12.5□□□□□ -0.41
KCNN4-208ENST00000601549 HSPB8Q9UJY1 196 aa12.5□□□□□ -0.41
KCNN4-208ENST00000601549 TMA7Q9Y2S6 64 aaKnown RBP12.5□□□□□ -0.41
KCNN4-208ENST00000601549 MRPS16Q9Y3D3 137 aaKnown RBP12.5□□□□□ -0.41
KCNN4-208ENST00000601549 A0A1B0GUV1 79 aa12.49□□□□□ -0.41
KCNN4-208ENST00000601549 SNRPEP62304 92 aaKnown RBP12.49□□□□□ -0.41
KCNN4-208ENST00000601549 ESRGQ1W209 222 aa12.49□□□□□ -0.41
KCNN4-208ENST00000601549 PDZD11Q5EBL8 140 aa12.49□□□□□ -0.41
KCNN4-208ENST00000601549 ERASQ7Z444 233 aa12.49□□□□□ -0.41
KCNN4-208ENST00000601549 HIST3H2BBQ8N257 126 aa12.49□□□□□ -0.41
KCNN4-208ENST00000601549 CHCHD5Q9BSY4 110 aa12.49□□□□□ -0.41
KCNN4-208ENST00000601549 UPK3BQ9BT76 320 aa12.49□□□□□ -0.41
KCNN4-208ENST00000601549 A0A096LNJ9 63 aa12.48□□□□□ -0.41
KCNN4-208ENST00000601549 K7EP13 123 aa12.48□□□□□ -0.41
KCNN4-208ENST00000601549 NUPR1O60356 82 aa12.48□□□□□ -0.41
KCNN4-208ENST00000601549 LEPROTL1O95214 131 aa12.48□□□□□ -0.41
KCNN4-208ENST00000601549 AMMECR1LQ6DCA0 310 aa12.47□□□□□ -0.41
KCNN4-208ENST00000601549 TMEM101Q96IK0 257 aa12.47□□□□□ -0.41
KCNN4-208ENST00000601549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.46□□□□□ -0.41
KCNN4-208ENST00000601549 MRPS36P82909 103 aaKnown RBP12.46□□□□□ -0.41
KCNN4-208ENST00000601549 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.41
KCNN4-208ENST00000601549 SCGB3A1Q96QR1 104 aa12.46□□□□□ -0.41
KCNN4-208ENST00000601549 UBE2D4Q9Y2X8 147 aa12.46□□□□□ -0.41
KCNN4-208ENST00000601549 IGIPA6NJ69 53 aa12.45□□□□□ -0.42
KCNN4-208ENST00000601549 FGF6P10767 208 aa12.45□□□□□ -0.42
KCNN4-208ENST00000601549 FAM19A2Q8N3H0 131 aa12.45□□□□□ -0.42
KCNN4-208ENST00000601549 HYDINQ4G0P3 5121 aa12.45□□□□□ -0.42
KCNN4-208ENST00000601549 A0A087WX48 190 aa12.44□□□□□ -0.42
KCNN4-208ENST00000601549 Q6ZN92 141 aa12.44□□□□□ -0.42
KCNN4-208ENST00000601549 OR5A1Q8NGJ0 315 aa12.44□□□□□ -0.42
KCNN4-208ENST00000601549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.43□□□□□ -0.42
KCNN4-208ENST00000601549 IGKV2-29A2NJV5 120 aaPredicted RBP12.43□□□□□ -0.42
KCNN4-208ENST00000601549 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
KCNN4-208ENST00000601549 PMCHL1Q16048 86 aa12.43□□□□□ -0.42
KCNN4-208ENST00000601549 HIST1H2BLQ99880 126 aa12.43□□□□□ -0.42
KCNN4-208ENST00000601549 LINC00588Q9Y4M8 146 aa12.43□□□□□ -0.42
KCNN4-208ENST00000601549 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
KCNN4-208ENST00000601549 AKR1D1P51857 326 aa12.42□□□□□ -0.42
KCNN4-208ENST00000601549 LINC01556Q5JQF7 62 aa12.42□□□□□ -0.42
KCNN4-208ENST00000601549 IFI27L1Q96BM0 104 aa12.42□□□□□ -0.42
KCNN4-208ENST00000601549 PCLOQ9Y6V0 5065 aa12.42□□□□□ -0.42
KCNN4-208ENST00000601549 DNAH7Q8WXX0 4024 aa12.42□□□□□ -0.42
KCNN4-208ENST00000601549 DNAH10OSP0CZ25 163 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms