RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 USP17L23D6RBM5 183 aa13.77□□□□□ -0.21
SNRPA-211ENST00000601545 UBE2L6O14933 153 aa13.77□□□□□ -0.21
SNRPA-211ENST00000601545 IGLV4-60A0A075B6I1 120 aa13.76□□□□□ -0.21
SNRPA-211ENST00000601545 IGLV10-54A0A075B6I4 117 aa13.76□□□□□ -0.21
SNRPA-211ENST00000601545 AMTP48728 403 aa13.76□□□□□ -0.21
SNRPA-211ENST00000601545 REG3AQ06141 175 aa13.76□□□□□ -0.21
SNRPA-211ENST00000601545 LINC01551Q86U37 167 aa13.76□□□□□ -0.21
SNRPA-211ENST00000601545 C20orf203Q8NBC4 194 aa13.76□□□□□ -0.21
SNRPA-211ENST00000601545 RPL39LQ96EH5 51 aaKnown RBP13.76□□□□□ -0.21
SNRPA-211ENST00000601545 Q6ZSA8 131 aa13.75□□□□□ -0.21
SNRPA-211ENST00000601545 A0A1B0GUV1 79 aa13.74□□□□□ -0.21
SNRPA-211ENST00000601545 CT83Q5H943 113 aa13.74□□□□□ -0.21
SNRPA-211ENST00000601545 KRTAP26-1Q6PEX3 210 aa13.74□□□□□ -0.21
SNRPA-211ENST00000601545 BORCS7Q96B45 105 aa13.74□□□□□ -0.21
SNRPA-211ENST00000601545 NDUFS6O75380 124 aaKnown RBP13.73□□□□□ -0.21
SNRPA-211ENST00000601545 PRSS1P07477 247 aa13.73□□□□□ -0.21
SNRPA-211ENST00000601545 GFRA4Q9GZZ7 299 aa13.73□□□□□ -0.21
SNRPA-211ENST00000601545 VPS13BQ7Z7G8 4022 aa13.73□□□□□ -0.21
SNRPA-211ENST00000601545 TEX261Q6UWH6 196 aa13.72□□□□□ -0.21
SNRPA-211ENST00000601545 TSKUQ8WUA8 353 aa13.72□□□□□ -0.21
SNRPA-211ENST00000601545 OSTCQ9NRP0 149 aa13.72□□□□□ -0.21
SNRPA-211ENST00000601545 HIGD1CA8MV81 97 aa13.71□□□□□ -0.21
SNRPA-211ENST00000601545 TRAV8-4A0A0B4J246 113 aa13.7□□□□□ -0.22
SNRPA-211ENST00000601545 A0A1B0GUT8 65 aa13.7□□□□□ -0.22
SNRPA-211ENST00000601545 TMEM241Q24JQ0 296 aa13.7□□□□□ -0.22
SNRPA-211ENST00000601545 SCXQ7RTU7 201 aa13.7□□□□□ -0.22
SNRPA-211ENST00000601545 SDHAF1A6NFY7 115 aa13.69□□□□□ -0.22
SNRPA-211ENST00000601545 IGKV3OR2-268A0A0C4DH90 116 aa13.68□□□□□ -0.22
SNRPA-211ENST00000601545 GAS8-AS1O95177 125 aa13.68□□□□□ -0.22
SNRPA-211ENST00000601545 PMCHP20382 165 aa13.68□□□□□ -0.22
SNRPA-211ENST00000601545 LINC00528Q8N1L1 170 aa13.68□□□□□ -0.22
SNRPA-211ENST00000601545 CHAC1Q9BUX1 264 aa13.68□□□□□ -0.22
SNRPA-211ENST00000601545 SRRM2Q9UQ35 2752 aaKnown RBP13.67□□□□□ -0.22
SNRPA-211ENST00000601545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.67□□□□□ -0.22
SNRPA-211ENST00000601545 IGKV2-29A2NJV5 120 aaPredicted RBP13.67□□□□□ -0.22
SNRPA-211ENST00000601545 C9JQL5 133 aa13.67□□□□□ -0.22
SNRPA-211ENST00000601545 APCSP02743 223 aa13.67□□□□□ -0.22
SNRPA-211ENST00000601545 AMMECR1LQ6DCA0 310 aa13.67□□□□□ -0.22
SNRPA-211ENST00000601545 DGAT2L7PQ6IED9 249 aa13.67□□□□□ -0.22
SNRPA-211ENST00000601545 RNASEKQ6P5S7 137 aaKnown RBP13.67□□□□□ -0.22
SNRPA-211ENST00000601545 TMEM191AQ9H0A3 160 aa13.67□□□□□ -0.22
SNRPA-211ENST00000601545 V9GYV3 84 aa13.67□□□□□ -0.22
SNRPA-211ENST00000601545 FAM231BA6NCW3 169 aa13.66□□□□□ -0.22
SNRPA-211ENST00000601545 NCR2O95944 276 aa13.66□□□□□ -0.22
SNRPA-211ENST00000601545 RPL23P62829 140 aaKnown RBP13.66□□□□□ -0.22
SNRPA-211ENST00000601545 FAM74A3Q4VXF1 159 aa13.66□□□□□ -0.22
SNRPA-211ENST00000601545 ISOC2Q96AB3 205 aa13.66□□□□□ -0.22
SNRPA-211ENST00000601545 I3L3M4 83 aa13.65□□□□□ -0.22
SNRPA-211ENST00000601545 PLA2G1BP04054 148 aaKnown RBP13.65□□□□□ -0.22
SNRPA-211ENST00000601545 RAB4AP20338 218 aa13.65□□□□□ -0.22
SNRPA-211ENST00000601545 SRSF3P84103 164 aaKnown RBP13.65□□□□□ -0.22
SNRPA-211ENST00000601545 ADIRFQ15847 76 aa13.65□□□□□ -0.22
SNRPA-211ENST00000601545 CLRN3Q8NCR9 226 aa13.65□□□□□ -0.22
SNRPA-211ENST00000601545 NUP35Q8NFH5 326 aa13.65□□□□□ -0.22
SNRPA-211ENST00000601545 CIRBP-AS1Q8TBR5 109 aa13.65□□□□□ -0.22
SNRPA-211ENST00000601545 ST20Q9HBF5 79 aa13.65□□□□□ -0.22
SNRPA-211ENST00000601545 RIGQ13278 110 aa13.64□□□□□ -0.23
SNRPA-211ENST00000601545 PEA15Q15121 130 aa13.64□□□□□ -0.23
SNRPA-211ENST00000601545 AMN1Q8IY45 258 aa13.64□□□□□ -0.23
SNRPA-211ENST00000601545 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
SNRPA-211ENST00000601545 TRBV6-5A0A0K0K1A5 114 aa13.63□□□□□ -0.23
SNRPA-211ENST00000601545 hDV102S1A0JD36 115 aa13.63□□□□□ -0.23
SNRPA-211ENST00000601545 FGF6P10767 208 aa13.63□□□□□ -0.23
SNRPA-211ENST00000601545 C9orf163Q8N9P6 203 aa13.63□□□□□ -0.23
SNRPA-211ENST00000601545 NAT8Q9UHE5 227 aa13.63□□□□□ -0.23
SNRPA-211ENST00000601545 GAGE12HA6NDE8 117 aa13.62□□□□□ -0.23
SNRPA-211ENST00000601545 RPS10P46783 165 aaKnown RBP13.62□□□□□ -0.23
SNRPA-211ENST00000601545 H7C423 109 aa13.61□□□□□ -0.23
SNRPA-211ENST00000601545 MRAP2Q96G30 205 aa13.61□□□□□ -0.23
SNRPA-211ENST00000601545 TMEM242Q9NWH2 141 aa13.61□□□□□ -0.23
SNRPA-211ENST00000601545 SMKR1H3BMG3 65 aa13.6□□□□□ -0.23
SNRPA-211ENST00000601545 AP5S1Q9NUS5 200 aa13.6□□□□□ -0.23
SNRPA-211ENST00000601545 NAT8BQ9UHF3 227 aa13.6□□□□□ -0.23
SNRPA-211ENST00000601545 FLG2Q5D862 2391 aaPredicted RBP13.6□□□□□ -0.23
SNRPA-211ENST00000601545 TSHBP01222 138 aa13.59□□□□□ -0.23
SNRPA-211ENST00000601545 POLR2KP53803 58 aaKnown RBP13.59□□□□□ -0.23
SNRPA-211ENST00000601545 BTF3L4Q96K17 158 aa13.59□□□□□ -0.23
SNRPA-211ENST00000601545 CHCHD10Q8WYQ3 142 aaPredicted RBP13.58□□□□□ -0.24
SNRPA-211ENST00000601545 TMEM101Q96IK0 257 aa13.58□□□□□ -0.24
SNRPA-211ENST00000601545 ESDP10768 282 aa13.57□□□□□ -0.24
SNRPA-211ENST00000601545 CAMPP49913 170 aa13.57□□□□□ -0.24
SNRPA-211ENST00000601545 SDIM1Q6ZPB5 146 aa13.57□□□□□ -0.24
SNRPA-211ENST00000601545 SMDT1Q9H4I9 107 aa13.57□□□□□ -0.24
SNRPA-211ENST00000601545 SMIM27A0A1W2PRY6 76 aa13.56□□□□□ -0.24
SNRPA-211ENST00000601545 SLPIP03973 132 aa13.56□□□□□ -0.24
SNRPA-211ENST00000601545 CNBPP62633 177 aaKnown RBP13.56□□□□□ -0.24
SNRPA-211ENST00000601545 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
SNRPA-211ENST00000601545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.56□□□□□ -0.24
SNRPA-211ENST00000601545 TRBV27A0A0K0K1C4 114 aa13.55□□□□□ -0.24
SNRPA-211ENST00000601545 VCYO14598 125 aa13.55□□□□□ -0.24
SNRPA-211ENST00000601545 ZNF25P17030 456 aaPredicted RBP13.55□□□□□ -0.24
SNRPA-211ENST00000601545 DPH3Q96FX2 82 aa13.55□□□□□ -0.24
SNRPA-211ENST00000601545 MYCBP2O75592 4640 aa13.55□□□□□ -0.24
SNRPA-211ENST00000601545 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.54□□□□□ -0.24
SNRPA-211ENST00000601545 OR5A1Q8NGJ0 315 aa13.54□□□□□ -0.24
SNRPA-211ENST00000601545 HERC1Q15751 4861 aa13.54□□□□□ -0.24
SNRPA-211ENST00000601545 PANO1I0J062 215 aa13.53□□□□□ -0.24
SNRPA-211ENST00000601545 FCER1GP30273 86 aa13.53□□□□□ -0.24
SNRPA-211ENST00000601545 MRPL51Q4U2R6 128 aaKnown RBP13.53□□□□□ -0.24
SNRPA-211ENST00000601545 HIGD2BQ4VC39 106 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms