RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 DMBT1Q9UGM3 2413 aaPredicted RBP14.7□□□□□ -0.06
SSBP4-209ENST00000601357 IGLV4-60A0A075B6I1 120 aa14.69□□□□□ -0.06
SSBP4-209ENST00000601357 PLA2G1BP04054 148 aaKnown RBP14.69□□□□□ -0.06
SSBP4-209ENST00000601357 PRSS1P07477 247 aa14.69□□□□□ -0.06
SSBP4-209ENST00000601357 TRAV26-2A0A0B4J265 109 aa14.68□□□□□ -0.06
SSBP4-209ENST00000601357 CIRBP-AS1Q8TBR5 109 aa14.68□□□□□ -0.06
SSBP4-209ENST00000601357 COTL1Q14019 142 aa14.67□□□□□ -0.06
SSBP4-209ENST00000601357 DGAT2L7PQ6IED9 249 aa14.67□□□□□ -0.06
SSBP4-209ENST00000601357 DEFB104AQ8WTQ1 72 aa14.67□□□□□ -0.06
SSBP4-209ENST00000601357 GFRA4Q9GZZ7 299 aa14.67□□□□□ -0.06
SSBP4-209ENST00000601357 GATCO43716 136 aaKnown RBP14.66□□□□□ -0.06
SSBP4-209ENST00000601357 NDUFS6O75380 124 aaKnown RBP14.66□□□□□ -0.06
SSBP4-209ENST00000601357 FOXA3P55318 350 aaPredicted RBP14.66□□□□□ -0.06
SSBP4-209ENST00000601357 TRAV8-4A0A0B4J246 113 aa14.65□□□□□ -0.06
SSBP4-209ENST00000601357 A8MWL6 223 aa14.65□□□□□ -0.06
SSBP4-209ENST00000601357 AMTP48728 403 aa14.65□□□□□ -0.06
SSBP4-209ENST00000601357 CT83Q5H943 113 aa14.65□□□□□ -0.06
SSBP4-209ENST00000601357 IGLV10-54A0A075B6I4 117 aa14.64□□□□□ -0.07
SSBP4-209ENST00000601357 C9orf163Q8N9P6 203 aa14.64□□□□□ -0.07
SSBP4-209ENST00000601357 RPL39LQ96EH5 51 aaKnown RBP14.64□□□□□ -0.07
SSBP4-209ENST00000601357 CEBPGP53567 150 aa14.63□□□□□ -0.07
SSBP4-209ENST00000601357 KRTAP10-4P60372 401 aaPredicted RBP14.63□□□□□ -0.07
SSBP4-209ENST00000601357 SMIM15Q7Z3B0 74 aa14.63□□□□□ -0.07
SSBP4-209ENST00000601357 UBE2L6O14933 153 aa14.62□□□□□ -0.07
SSBP4-209ENST00000601357 TEX261Q6UWH6 196 aa14.62□□□□□ -0.07
SSBP4-209ENST00000601357 LINC01551Q86U37 167 aa14.62□□□□□ -0.07
SSBP4-209ENST00000601357 CLRN3Q8NCR9 226 aa14.62□□□□□ -0.07
SSBP4-209ENST00000601357 FAM210AQ96ND0 272 aa14.62□□□□□ -0.07
SSBP4-209ENST00000601357 SMIM7Q9BQ49 75 aa14.62□□□□□ -0.07
SSBP4-209ENST00000601357 EIF5A2Q9GZV4 153 aaKnown RBP14.62□□□□□ -0.07
SSBP4-209ENST00000601357 NCR2O95944 276 aa14.6□□□□□ -0.07
SSBP4-209ENST00000601357 CNBPP62633 177 aaKnown RBP14.59□□□□□ -0.07
SSBP4-209ENST00000601357 A0A1B0GVG6 124 aa14.58□□□□□ -0.08
SSBP4-209ENST00000601357 SRP19P09132 144 aaKnown RBP14.58□□□□□ -0.08
SSBP4-209ENST00000601357 TSKUQ8WUA8 353 aa14.58□□□□□ -0.08
SSBP4-209ENST00000601357 TRBV6-5A0A0K0K1A5 114 aa14.57□□□□□ -0.08
SSBP4-209ENST00000601357 SDHAF1A6NFY7 115 aa14.57□□□□□ -0.08
SSBP4-209ENST00000601357 ZNF727A8MUV8 499 aa14.57□□□□□ -0.08
SSBP4-209ENST00000601357 SDIM1Q6ZPB5 146 aa14.57□□□□□ -0.08
SSBP4-209ENST00000601357 FAM231BA6NCW3 169 aa14.56□□□□□ -0.08
SSBP4-209ENST00000601357 HIGD1CA8MV81 97 aa14.56□□□□□ -0.08
SSBP4-209ENST00000601357 H7C423 109 aa14.56□□□□□ -0.08
SSBP4-209ENST00000601357 OSTCQ9NRP0 149 aa14.56□□□□□ -0.08
SSBP4-209ENST00000601357 A0A1B0GUT8 65 aa14.55□□□□□ -0.08
SSBP4-209ENST00000601357 GAS8-AS1O95177 125 aa14.55□□□□□ -0.08
SSBP4-209ENST00000601357 BORCS7Q96B45 105 aa14.55□□□□□ -0.08
SSBP4-209ENST00000601357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.55□□□□□ -0.08
SSBP4-209ENST00000601357 hDV102S1A0JD36 115 aa14.54□□□□□ -0.08
SSBP4-209ENST00000601357 PANO1I0J062 215 aa14.54□□□□□ -0.08
SSBP4-209ENST00000601357 APCSP02743 223 aa14.54□□□□□ -0.08
SSBP4-209ENST00000601357 TMEM191AQ9H0A3 160 aa14.54□□□□□ -0.08
SSBP4-209ENST00000601357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.53□□□□□ -0.08
SSBP4-209ENST00000601357 IGKV2-29A2NJV5 120 aaPredicted RBP14.53□□□□□ -0.08
SSBP4-209ENST00000601357 KRTAP29-1A8MX34 341 aaPredicted RBP14.53□□□□□ -0.08
SSBP4-209ENST00000601357 I3L3M4 83 aa14.53□□□□□ -0.08
SSBP4-209ENST00000601357 SLPIP03973 132 aa14.53□□□□□ -0.08
SSBP4-209ENST00000601357 FGF6P10767 208 aa14.52□□□□□ -0.09
SSBP4-209ENST00000601357 AMMECR1LQ6DCA0 310 aa14.52□□□□□ -0.09
SSBP4-209ENST00000601357 C15orf56Q8N910 161 aa14.52□□□□□ -0.09
SSBP4-209ENST00000601357 RNF185Q96GF1 192 aa14.52□□□□□ -0.09
SSBP4-209ENST00000601357 V9GYV3 84 aa14.52□□□□□ -0.09
SSBP4-209ENST00000601357 GAGE12HA6NDE8 117 aa14.51□□□□□ -0.09
SSBP4-209ENST00000601357 PMCHP20382 165 aa14.51□□□□□ -0.09
SSBP4-209ENST00000601357 CIRBPQ14011 172 aaKnown RBP14.51□□□□□ -0.09
SSBP4-209ENST00000601357 TSHBP01222 138 aa14.5□□□□□ -0.09
SSBP4-209ENST00000601357 ESDP10768 282 aa14.5□□□□□ -0.09
SSBP4-209ENST00000601357 RAB4AP20338 218 aa14.5□□□□□ -0.09
SSBP4-209ENST00000601357 RNASEKQ6P5S7 137 aaKnown RBP14.5□□□□□ -0.09
SSBP4-209ENST00000601357 ISOC2Q96AB3 205 aa14.5□□□□□ -0.09
SSBP4-209ENST00000601357 ST20Q9HBF5 79 aa14.5□□□□□ -0.09
SSBP4-209ENST00000601357 IGKV3OR2-268A0A0C4DH90 116 aa14.49□□□□□ -0.09
SSBP4-209ENST00000601357 J3QL48 77 aa14.49□□□□□ -0.09
SSBP4-209ENST00000601357 ZNF25P17030 456 aaPredicted RBP14.49□□□□□ -0.09
SSBP4-209ENST00000601357 RPS10P46783 165 aaKnown RBP14.49□□□□□ -0.09
SSBP4-209ENST00000601357 POLR2KP53803 58 aaKnown RBP14.49□□□□□ -0.09
SSBP4-209ENST00000601357 FAM74A3Q4VXF1 159 aa14.49□□□□□ -0.09
SSBP4-209ENST00000601357 MRAP2Q96G30 205 aa14.49□□□□□ -0.09
SSBP4-209ENST00000601357 AP5S1Q9NUS5 200 aa14.49□□□□□ -0.09
SSBP4-209ENST00000601357 IGHV3-64A0A075B6Q5 118 aa14.48□□□□□ -0.09
SSBP4-209ENST00000601357 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.48□□□□□ -0.09
SSBP4-209ENST00000601357 TMEM241Q24JQ0 296 aa14.48□□□□□ -0.09
SSBP4-209ENST00000601357 AMN1Q8IY45 258 aa14.48□□□□□ -0.09
SSBP4-209ENST00000601357 NUP35Q8NFH5 326 aa14.48□□□□□ -0.09
SSBP4-209ENST00000601357 CHCHD10Q8WYQ3 142 aaPredicted RBP14.48□□□□□ -0.09
SSBP4-209ENST00000601357 PKHD1L1Q86WI1 4243 aa14.48□□□□□ -0.09
SSBP4-209ENST00000601357 LRP1Q07954 4544 aaKnown RBP14.48□□□□□ -0.09
SSBP4-209ENST00000601357 TRBV27A0A0K0K1C4 114 aa14.47□□□□□ -0.09
SSBP4-209ENST00000601357 C9JQL5 133 aa14.47□□□□□ -0.09
SSBP4-209ENST00000601357 RPL23P62829 140 aaKnown RBP14.47□□□□□ -0.09
SSBP4-209ENST00000601357 CFAP161Q6P656 301 aa14.46□□□□□ -0.09
SSBP4-209ENST00000601357 OR5A1Q8NGJ0 315 aa14.46□□□□□ -0.09
SSBP4-209ENST00000601357 TMEM242Q9NWH2 141 aa14.46□□□□□ -0.09
SSBP4-209ENST00000601357 RPL37AP61513 92 aaKnown RBP14.45□□□□□ -0.1
SSBP4-209ENST00000601357 FOXI1Q12951 378 aa14.44□□□□□ -0.1
SSBP4-209ENST00000601357 RIGQ13278 110 aa14.44□□□□□ -0.1
SSBP4-209ENST00000601357 MRPL52Q86TS9 123 aaKnown RBP14.44□□□□□ -0.1
SSBP4-209ENST00000601357 NAT8BQ9UHF3 227 aa14.44□□□□□ -0.1
SSBP4-209ENST00000601357 SRSF3P84103 164 aaKnown RBP14.43□□□□□ -0.1
SSBP4-209ENST00000601357 TMEM101Q96IK0 257 aa14.43□□□□□ -0.1
SSBP4-209ENST00000601357 BTF3L4Q96K17 158 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms