RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 C20orf203Q8NBC4 194 aa10.4□□□□□ -0.74
RPS28-203ENST00000600659 ABCA13Q86UQ4 5058 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 IGLV4-60A0A075B6I1 120 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 A0A1B0GXF2 115 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 SDHAF1A6NFY7 115 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 CDK2AP2O75956 126 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 ANGP03950 147 aaKnown RBP10.39□□□□□ -0.75
RPS28-203ENST00000600659 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 PKIAP61925 76 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 COTL1Q14019 142 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 KRTAP26-1Q6PEX3 210 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 TMEM243Q9BU79 118 aa10.39□□□□□ -0.75
RPS28-203ENST00000600659 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
RPS28-203ENST00000600659 PCLOQ9Y6V0 5065 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 A0A1B0GUV1 79 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 SMKR1H3BMG3 65 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 LECT2O14960 151 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 NCR2O95944 276 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 AMTP48728 403 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 POLR2KP53803 58 aaKnown RBP10.37□□□□□ -0.75
RPS28-203ENST00000600659 Q0VG73 95 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 NRACQ8N912 160 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 MRAP2Q96G30 205 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 TMEM70Q9BUB7 260 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
RPS28-203ENST00000600659 PNRC1Q12796 327 aaPredicted RBP10.36□□□□□ -0.75
RPS28-203ENST00000600659 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
RPS28-203ENST00000600659 FAM104BQ5XKR9 115 aa10.36□□□□□ -0.75
RPS28-203ENST00000600659 MRPL54Q6P161 138 aaKnown RBP10.36□□□□□ -0.75
RPS28-203ENST00000600659 UQCC3Q6UW78 93 aa10.36□□□□□ -0.75
RPS28-203ENST00000600659 CLPSL2Q6UWE3 100 aa10.36□□□□□ -0.75
RPS28-203ENST00000600659 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
RPS28-203ENST00000600659 NTN5Q8WTR8 489 aaPredicted RBP10.36□□□□□ -0.75
RPS28-203ENST00000600659 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
RPS28-203ENST00000600659 RMI2Q96E14 147 aa10.36□□□□□ -0.75
RPS28-203ENST00000600659 TSHBP01222 138 aa10.35□□□□□ -0.75
RPS28-203ENST00000600659 MIAQ16674 131 aa10.35□□□□□ -0.75
RPS28-203ENST00000600659 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 A0A1B0GW15 77 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 I3L3M4 83 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 CRPP02741 224 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 ESDP10768 282 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 CAMPP49913 170 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 C1orf43Q9BWL3 253 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 ST20Q9HBF5 79 aa10.34□□□□□ -0.75
RPS28-203ENST00000600659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.33□□□□□ -0.76
RPS28-203ENST00000600659 IGKV2-29A2NJV5 120 aaPredicted RBP10.33□□□□□ -0.76
RPS28-203ENST00000600659 REG3AQ06141 175 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 KRTAP4-5Q9BYR2 181 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 TMEM242Q9NWH2 141 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 APCSP02743 223 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 XGP55808 180 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 HBBP68871 147 aa10.33□□□□□ -0.76
RPS28-203ENST00000600659 PMCHP20382 165 aa10.32□□□□□ -0.76
RPS28-203ENST00000600659 GCSHP23434 173 aa10.32□□□□□ -0.76
RPS28-203ENST00000600659 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
RPS28-203ENST00000600659 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.31□□□□□ -0.76
RPS28-203ENST00000600659 TRBV24-1A0A075B6N3 115 aa10.31□□□□□ -0.76
RPS28-203ENST00000600659 H7C423 109 aa10.31□□□□□ -0.76
RPS28-203ENST00000600659 UBE2L6O14933 153 aa10.31□□□□□ -0.76
RPS28-203ENST00000600659 SUMO2P61956 95 aaKnown RBP10.31□□□□□ -0.76
RPS28-203ENST00000600659 ANAPC16Q96DE5 110 aa10.31□□□□□ -0.76
RPS28-203ENST00000600659 MT-ND4LP03901 98 aa10.3□□□□□ -0.76
RPS28-203ENST00000600659 FGF6P10767 208 aa10.3□□□□□ -0.76
RPS28-203ENST00000600659 COMMD7Q86VX2 200 aa10.3□□□□□ -0.76
RPS28-203ENST00000600659 IGLV10-54A0A075B6I4 117 aa10.29□□□□□ -0.76
RPS28-203ENST00000600659 LINC00862A6NCI5 91 aa10.29□□□□□ -0.76
RPS28-203ENST00000600659 F8W036 122 aa10.29□□□□□ -0.76
RPS28-203ENST00000600659 HLA-DQA1P01909 254 aa10.29□□□□□ -0.76
RPS28-203ENST00000600659 D6R8Y8 96 aa10.28□□□□□ -0.76
RPS28-203ENST00000600659 USP17L23D6RBM5 183 aa10.28□□□□□ -0.76
RPS28-203ENST00000600659 S100A8P05109 93 aa10.28□□□□□ -0.76
RPS28-203ENST00000600659 RPL32P62910 135 aaKnown RBP10.28□□□□□ -0.76
RPS28-203ENST00000600659 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
RPS28-203ENST00000600659 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
RPS28-203ENST00000600659 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 VCYO14598 125 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 PPP1R17O96001 155 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 NPYP01303 97 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 CKS2P33552 79 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 Q6ZSA8 131 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
RPS28-203ENST00000600659 C20orf78Q9BR46 151 aa10.27□□□□□ -0.77
RPS28-203ENST00000600659 C7orf77A4D0Y5 90 aa10.26□□□□□ -0.77
RPS28-203ENST00000600659 ZNF25P17030 456 aaPredicted RBP10.26□□□□□ -0.77
RPS28-203ENST00000600659 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
RPS28-203ENST00000600659 AMMECR1LQ6DCA0 310 aa10.26□□□□□ -0.77
RPS28-203ENST00000600659 PRSS1P07477 247 aa10.25□□□□□ -0.77
RPS28-203ENST00000600659 HAMPP81172 84 aa10.25□□□□□ -0.77
RPS28-203ENST00000600659 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
RPS28-203ENST00000600659 Q8N1X5 172 aa10.25□□□□□ -0.77
RPS28-203ENST00000600659 SMIM2Q9BVW6 85 aa10.25□□□□□ -0.77
RPS28-203ENST00000600659 PHOX2AO14813 284 aa10.24□□□□□ -0.77
RPS28-203ENST00000600659 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
RPS28-203ENST00000600659 PPBPP02775 128 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms