RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648		K7EN84	100 aa		13.88	□□□□□ -0.19
FARP1-231	ENST00000600648	UBE2L6	O14933	153 aa		13.88	□□□□□ -0.19
FARP1-231	ENST00000600648	AMT	P48728	403 aa		13.88	□□□□□ -0.19
FARP1-231	ENST00000600648	RPP21	Q9H633	154 aa	Known RBP	13.88	□□□□□ -0.19
FARP1-231	ENST00000600648	TRAV26-2	A0A0B4J265	109 aa		13.87	□□□□□ -0.19
FARP1-231	ENST00000600648		A0A1B0GUV1	79 aa		13.87	□□□□□ -0.19
FARP1-231	ENST00000600648	PANO1	I0J062	215 aa		13.87	□□□□□ -0.19
FARP1-231	ENST00000600648	RPL37A	P61513	92 aa	Known RBP	13.87	□□□□□ -0.19
FARP1-231	ENST00000600648	COTL1	Q14019	142 aa		13.87	□□□□□ -0.19
FARP1-231	ENST00000600648	OCC1	Q8TAD7	63 aa		13.87	□□□□□ -0.19
FARP1-231	ENST00000600648	PGLYRP4	Q96LB8	373 aa		13.87	□□□□□ -0.19
FARP1-231	ENST00000600648	TRAV8-4	A0A0B4J246	113 aa		13.86	□□□□□ -0.19
FARP1-231	ENST00000600648	WDR73	Q6P4I2	378 aa		13.86	□□□□□ -0.19
FARP1-231	ENST00000600648	GATD1	Q8NB37	220 aa		13.86	□□□□□ -0.19
FARP1-231	ENST00000600648	CLRN3	Q8NCR9	226 aa		13.86	□□□□□ -0.19
FARP1-231	ENST00000600648	TAGLN2	P37802	199 aa	Known RBP	13.85	□□□□□ -0.19
FARP1-231	ENST00000600648	SDIM1	Q6ZPB5	146 aa		13.85	□□□□□ -0.19
FARP1-231	ENST00000600648	IGKV3OR2-268	A0A0C4DH90	116 aa		13.84	□□□□□ -0.19
FARP1-231	ENST00000600648	CNFN	Q9BYD5	112 aa		13.84	□□□□□ -0.19
FARP1-231	ENST00000600648	FOXA3	P55318	350 aa	Predicted RBP	13.83	□□□□□ -0.2
FARP1-231	ENST00000600648	GTSF1	Q8WW33	167 aa		13.83	□□□□□ -0.2
FARP1-231	ENST00000600648	RPL39L	Q96EH5	51 aa	Known RBP	13.83	□□□□□ -0.2
FARP1-231	ENST00000600648	AP5S1	Q9NUS5	200 aa		13.82	□□□□□ -0.2
FARP1-231	ENST00000600648	HNRNPA3	P51991	378 aa	Known RBP	13.81	□□□□□ -0.2
FARP1-231	ENST00000600648	CNBP	P62633	177 aa	Known RBP	13.81	□□□□□ -0.2
FARP1-231	ENST00000600648		Q6ZNX1	250 aa		13.81	□□□□□ -0.2
FARP1-231	ENST00000600648	GAGE12H	A6NDE8	117 aa		13.8	□□□□□ -0.2
FARP1-231	ENST00000600648	SLPI	P03973	132 aa		13.8	□□□□□ -0.2
FARP1-231	ENST00000600648	CEBPG	P53567	150 aa		13.8	□□□□□ -0.2
FARP1-231	ENST00000600648	SMIM15	Q7Z3B0	74 aa		13.8	□□□□□ -0.2
FARP1-231	ENST00000600648	GATC	O43716	136 aa	Known RBP	13.79	□□□□□ -0.2
FARP1-231	ENST00000600648	OXT	P01178	125 aa		13.79	□□□□□ -0.2
FARP1-231	ENST00000600648	ALKAL2	Q6UX46	152 aa		13.79	□□□□□ -0.2
FARP1-231	ENST00000600648	DPH3	Q96FX2	82 aa		13.79	□□□□□ -0.2
FARP1-231	ENST00000600648	IGHV3-64	A0A075B6Q5	118 aa		13.78	□□□□□ -0.2
FARP1-231	ENST00000600648	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.78	□□□□□ -0.2
FARP1-231	ENST00000600648	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.78	□□□□□ -0.2
FARP1-231	ENST00000600648	CHTF8	P0CG12	524 aa		13.78	□□□□□ -0.2
FARP1-231	ENST00000600648	AMMECR1L	Q6DCA0	310 aa		13.78	□□□□□ -0.2
FARP1-231	ENST00000600648	RNASEK	Q6P5S7	137 aa	Known RBP	13.78	□□□□□ -0.2
FARP1-231	ENST00000600648	hCG_2014768	A0A024R1R8	64 aa		13.77	□□□□□ -0.21
FARP1-231	ENST00000600648	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.77	□□□□□ -0.21
FARP1-231	ENST00000600648	HMCN2	Q8NDA2	5059 aa		13.77	□□□□□ -0.21
FARP1-231	ENST00000600648	AKAP14	Q86UN6	197 aa		13.76	□□□□□ -0.21
FARP1-231	ENST00000600648	C15orf56	Q8N910	161 aa		13.76	□□□□□ -0.21
FARP1-231	ENST00000600648	SDHAF1	A6NFY7	115 aa		13.75	□□□□□ -0.21
FARP1-231	ENST00000600648	TMEM250	H0YL14	139 aa		13.75	□□□□□ -0.21
FARP1-231	ENST00000600648	APCS	P02743	223 aa		13.75	□□□□□ -0.21
FARP1-231	ENST00000600648	BLOC1S1	P78537	153 aa		13.75	□□□□□ -0.21
FARP1-231	ENST00000600648	HIGD2B	Q4VC39	106 aa		13.75	□□□□□ -0.21
FARP1-231	ENST00000600648		A8MWL6	223 aa		13.74	□□□□□ -0.21
FARP1-231	ENST00000600648	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.74	□□□□□ -0.21
FARP1-231	ENST00000600648	NCR2	O95944	276 aa		13.73	□□□□□ -0.21
FARP1-231	ENST00000600648	FGF6	P10767	208 aa		13.73	□□□□□ -0.21
FARP1-231	ENST00000600648	CIRBP	Q14011	172 aa	Known RBP	13.73	□□□□□ -0.21
FARP1-231	ENST00000600648	CFAP161	Q6P656	301 aa		13.73	□□□□□ -0.21
FARP1-231	ENST00000600648	FAM231D	Q6ZW35	169 aa		13.73	□□□□□ -0.21
FARP1-231	ENST00000600648		A0A087WYN8	130 aa		13.72	□□□□□ -0.21
FARP1-231	ENST00000600648	GAS8-AS1	O95177	125 aa		13.72	□□□□□ -0.21
FARP1-231	ENST00000600648	PMCH	P20382	165 aa		13.72	□□□□□ -0.21
FARP1-231	ENST00000600648	TEX261	Q6UWH6	196 aa		13.72	□□□□□ -0.21
FARP1-231	ENST00000600648	SERTAD4-AS1	Q5TG53	156 aa		13.71	□□□□□ -0.21
FARP1-231	ENST00000600648	SPACA4	Q8TDM5	124 aa		13.71	□□□□□ -0.21
FARP1-231	ENST00000600648		I3L3M4	83 aa		13.7	□□□□□ -0.22
FARP1-231	ENST00000600648	BORCS7	Q96B45	105 aa		13.7	□□□□□ -0.22
FARP1-231	ENST00000600648	EIF5A2	Q9GZV4	153 aa	Known RBP	13.7	□□□□□ -0.22
FARP1-231	ENST00000600648	FAM231B	A6NCW3	169 aa		13.69	□□□□□ -0.22
FARP1-231	ENST00000600648		H7C423	109 aa		13.69	□□□□□ -0.22
FARP1-231	ENST00000600648	RPS10	P46783	165 aa	Known RBP	13.69	□□□□□ -0.22
FARP1-231	ENST00000600648	COX6A2	Q02221	97 aa		13.69	□□□□□ -0.22
FARP1-231	ENST00000600648	LYPD6B	Q8NI32	183 aa		13.69	□□□□□ -0.22
FARP1-231	ENST00000600648	SMIM7	Q9BQ49	75 aa		13.69	□□□□□ -0.22
FARP1-231	ENST00000600648	CT83	Q5H943	113 aa		13.68	□□□□□ -0.22
FARP1-231	ENST00000600648	RNF185	Q96GF1	192 aa		13.68	□□□□□ -0.22
FARP1-231	ENST00000600648	TMEM242	Q9NWH2	141 aa		13.68	□□□□□ -0.22
FARP1-231	ENST00000600648	IGKV2-24	A0A0C4DH68	120 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648	TRBV6-5	A0A0K0K1A5	114 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648	HIGD1C	A8MV81	97 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648	XCL1	P47992	114 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648	PRSS3P2	Q8NHM4	247 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648	TMEM101	Q96IK0	257 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648	BTF3L4	Q96K17	158 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648	ST20	Q9HBF5	79 aa		13.67	□□□□□ -0.22
FARP1-231	ENST00000600648		A0A1B0GUT8	65 aa		13.66	□□□□□ -0.22
FARP1-231	ENST00000600648	TSHB	P01222	138 aa		13.66	□□□□□ -0.22
FARP1-231	ENST00000600648	FOXI1	Q12951	378 aa		13.66	□□□□□ -0.22
FARP1-231	ENST00000600648	LINC01551	Q86U37	167 aa		13.66	□□□□□ -0.22
FARP1-231	ENST00000600648	OR5A1	Q8NGJ0	315 aa		13.66	□□□□□ -0.22
FARP1-231	ENST00000600648	ZNF727	A8MUV8	499 aa		13.65	□□□□□ -0.22
FARP1-231	ENST00000600648	ZNF25	P17030	456 aa	Predicted RBP	13.65	□□□□□ -0.22
FARP1-231	ENST00000600648	MAJIN	Q3KP22	176 aa		13.65	□□□□□ -0.22
FARP1-231	ENST00000600648	TSKU	Q8WUA8	353 aa		13.65	□□□□□ -0.22
FARP1-231	ENST00000600648	PLAC8	Q9NZF1	115 aa		13.65	□□□□□ -0.22
FARP1-231	ENST00000600648	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.64	□□□□□ -0.23
FARP1-231	ENST00000600648	CCL25	O15444	150 aa		13.64	□□□□□ -0.23
FARP1-231	ENST00000600648	ESD	P10768	282 aa		13.64	□□□□□ -0.23
FARP1-231	ENST00000600648	MRAP2	Q96G30	205 aa		13.64	□□□□□ -0.23
FARP1-231	ENST00000600648	PHOX2A	O14813	284 aa		13.63	□□□□□ -0.23
FARP1-231	ENST00000600648	NDUFS6	O75380	124 aa	Known RBP	13.63	□□□□□ -0.23
FARP1-231	ENST00000600648	AMN1	Q8IY45	258 aa		13.63	□□□□□ -0.23

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